PREDICTED: Drosophila takahashii DDB1- and CUL4-associated factor

LOCUS       XM_017139628            1306 bp    mRNA    linear   INV 09-DEC-2024
            12 homolog (LOC108056021), mRNA.
ACCESSION   XM_017139628
VERSION     XM_017139628.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017139628.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1306
                     /gene="LOC108056021"
                     /note="DDB1- and CUL4-associated factor 12 homolog;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:108056021"
     CDS             116..1243
                     /gene="LOC108056021"
                     /codon_start=1
                     /product="DDB1- and CUL4-associated factor 12 homolog"
                     /protein_id="XP_016995117.2"
                     /db_xref="GeneID:108056021"
                     /translation="MDDWMLKTVRDRGRPDTSLNIADYIRSRESGLRDRRSVNFDYAS
                     RYVLTKDMLRETPIGLPDATNGILCSKWLDSRKVVCGTKSNQMLVYDVKTRRLEEIPT
                     MFRDPEDKVGLQVIELSPSRSYLATTARNSLDIAVYRLPTLDPVYLGEGGHRKTIRGM
                     AWLDDQFLVSGSFDSGIVLWRIKEEFPDSALATINPLNVMTVSNDQGIRSVCFNKKFN
                     EIAAVSPNKCMHIFNADIFEQTLSGKLPSSQYNTHIACHSDGLYAVRSMDTAILLVTR
                     TLQTIKEISFESYDGNYMSISFEGNLMTVGTSGGMLNFYDIRAGKFLENSVRCSPKLD
                     HYRDMNWKFSVFTHCYDSTRMRIFTAGRLRCNLKGYAAVWQ"
     misc_feature    119..1108
                     /gene="LOC108056021"
                     /note="WD40 repeat [General function prediction only];
                     Region: WD40; COG2319"
                     /db_xref="CDD:441893"
     misc_feature    314..427
                     /gene="LOC108056021"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    455..565
                     /gene="LOC108056021"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    584..724
                     /gene="LOC108056021"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
     misc_feature    737..841
                     /gene="LOC108056021"
                     /note="WD40 repeat [structural motif]; Region: WD40
                     repeat"
                     /db_xref="CDD:293791"
ORIGIN      
        1 aattgaatca agttagcctt gttgagaaat gtcaaacgaa cgagaaacct gacccccctc
       61 agctcggtaa atattcagta cagttcaacg agtcgtacag gaactttcta tcggtatgga
      121 tgactggatg cttaaaactg tccgcgacag gggacgccca gacacgtccc tcaacatcgc
      181 agactacatc cgcagccggg aaagcggcct ccgcgatcgg cgcagtgtaa acttcgatta
      241 cgccagccgc tatgtcctaa ccaaggacat gttgcgcgaa acgccgatcg gcctgcccga
      301 cgccaccaac gggatccttt gctcgaagtg gctggacagc cgaaaggtgg tctgcggcac
      361 gaagtccaat caaatgctag tctacgacgt gaaaacgcgg cggttggagg aaatacccac
      421 gatgttcagg gatccggagg acaaggttgg tctgcaggtt atcgaattgt cgcccagccg
      481 cagctatctg gccaccactg cacgcaattc cttggacatt gcagtgtacc ggctgccaac
      541 gttggaccct gtatacttgg gcgagggcgg gcaccgcaag acaataaggg gcatggcctg
      601 gctggatgac cagttcctgg tctccggctc cttcgattcc ggcatcgtgt tgtggcgcat
      661 caaggaggag ttcccggata gtgccttggc cacaatcaat ccgctcaatg tcatgacggt
      721 aagcaatgac caggggatcc gttccgtttg cttcaacaag aagttcaacg agatcgccgc
      781 cgtctcgcca aacaaatgca tgcacatctt caacgcggat attttcgagc agacgctctc
      841 cggcaaactg ccaagctccc agtacaatac gcacattgcc tgccacagcg acggtctgta
      901 tgccgtacgt tctatggaca ctgctatcct gctggtcacg cggacgctcc agaccatcaa
      961 ggagatcagc ttcgaatcct acgacggcaa ttatatgtcc atatcattcg agggcaacct
     1021 catgaccgtt ggcaccagtg ggggcatgct aaatttctac gacatccgag ctggaaaatt
     1081 tttggagaac agtgtgaggt gcagccccaa actggaccac taccgggata tgaactggaa
     1141 gttctccgtc ttcacccact gctacgacag caccaggatg cgaatcttca cagcgggcag
     1201 actacggtgc aacttgaagg gctatgcggc cgtttggcaa taaataagca gaggatgcga
     1261 tacacacaat gcaaataaag gaatactaat ttaaagacaa tgcagc