PREDICTED: Drosophila takahashii 26S proteasome regulatory subunit

LOCUS       XM_017139505            1435 bp    mRNA    linear   INV 09-DEC-2024
            Rpt6 (Rpt6), mRNA.
ACCESSION   XM_017139505
VERSION     XM_017139505.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017139505.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1435
                     /gene="Rpt6"
                     /note="26S proteasome regulatory subunit Rpt6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins"
                     /db_xref="GeneID:108055921"
     CDS             142..1359
                     /gene="Rpt6"
                     /codon_start=1
                     /product="26S proteasome regulatory subunit 8"
                     /protein_id="XP_016994994.1"
                     /db_xref="GeneID:108055921"
                     /translation="MTVTNRMEIESAYQKGEGFRSYYIQKIEELQLVVAEKHQNLRRL
                     QAQRNELNAKVRMLREELQLLHEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNI
                     DINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEI
                     KEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL
                     VQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELL
                     NQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRK
                     MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK
                     DSEKNMSIKKLWK"
     misc_feature    208..1338
                     /gene="Rpt6"
                     /note="proteasome-activating nucleotidase; Provisional;
                     Region: PRK03992"
                     /db_xref="CDD:179699"
     polyA_site      1435
                     /gene="Rpt6"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgacagtgcg ataacagcat gtgccaccac aaataatcaa agaatgccga gtcatacgaa
       61 aaagcaaaat taactcgaag tatttgcctg aacaaacacg aataataaca aattgaagcg
      121 caacaaagag tcgcaggcaa aatgacggtg acgaatcgga tggaaatcga gtcggcctac
      181 caaaaaggcg agggattccg ttcctattac atccagaaga tcgaggaact gcagctggtt
      241 gtggccgaga agcaccagaa tctgcggcgt ctgcaggcgc agcgcaatga gctgaatgcc
      301 aaagttcgca tgctgcgcga ggagctgcag ctgctccacg aacaaggcag ctacgtgggc
      361 gaggtggtga agccgatgga caagaagaag gtgctggtca aggtgcatcc ggaggggaag
      421 tttgtcgtgg atctggacaa gaacatcgac atcaacgatg tgacgcccaa ttgccgtgtg
      481 gcgctgcgca acgagagcta cacgctgcac aagattctgc cgaataaggt tgatccgctg
      541 gtctcgctga tgatggtcga aaaggtgccc gattccacat atgaaatggt tggcggtctg
      601 gacaagcaga tcaaggaaat caaggaggtg atcgagctgc cggtgaagca tcccgaactg
      661 ttcgacgctc tgggcattgc ccagcccaag ggagtgctgc tctacggacc gccaggcacg
      721 ggaaaaacgc tactggccag ggccgtggcc catcacaccg agtgcacctt catccgtgtg
      781 tccggctcgg agctggtcca gaaattcatc ggcgagggct cgcgcatggt ccgcgaactc
      841 tttgtgatgg cccgcgaaca tgcgccgtcc atcatcttca tggacgaaat cgattccatt
      901 ggctcgtcgc gtattgagtc tggttctggc ggcgattccg aggtgcagcg caccatgctg
      961 gagctgctca accagctgga cggcttcgag gccaccaaga acatcaaggt gatcatggcc
     1021 accaatcgca ttgatattct ggatcccgct ctcctgcgtc ccgggcgcat cgatcgcaag
     1081 atcgagttcc cgccaccgaa cgaggaggcg cgtctggaca tcctgaagat acactcgcgc
     1141 aagatgaacc tcacgcgcgg catcaatctg cgcaagatcg ccgaactgat gccgggcgca
     1201 tcgggtgccg aggtcaaggg cgtctgcacg gaggccggca tgtatgcgct gcgcgagcgc
     1261 cgcgtccatg tcacccagga ggacttcgag atggccgtgg ccaaggttat gcagaaggac
     1321 tcggagaaga acatgtccat caagaagctg tggaagtaga cgatccgacg aaccaccgcc
     1381 gcgaattcga accttatttc attgtcaata aatacacata tgttagtaac ctaaa