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LOCUS XM_017139493 3283 bp mRNA linear INV 09-DEC-2024 1-like protein dullard (Dd), transcript variant X2, mRNA. ACCESSION XM_017139493 VERSION XM_017139493.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139493.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3283 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3283 /gene="Dd" /note="CTD nuclear envelope phosphatase 1-like protein dullard; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055914" CDS 860..1582 /gene="Dd" /codon_start=1 /product="CTD nuclear envelope phosphatase 1 homolog isoform X2" /protein_id="XP_016994982.1" /db_xref="GeneID:108055914" /translation="MISLLQMKFHALLLLLSKVWTCICFMFNRQVRAYQPVKYELFPL SPVSRHRLSLVQRKTLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNPVRF FVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHCTPD YGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPMDTALLSLLPMLD ALRFTNDVRSVLSRNLHLHRLW" misc_feature 1028..1534 /gene="Dd" /note="Dullard-like phosphatase domain; Region: HIF-SF_euk; TIGR02251" /db_xref="CDD:274055" misc_feature order(1046..1060,1070..1075,1235..1246,1256..1258, 1355..1357,1403..1408,1412..1420) /gene="Dd" /note="active site" /db_xref="CDD:319823" polyA_site 3283 /gene="Dd" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcagcgtcg caacaaattg gtcacactgt gcatgaggga atttgttaaa caaaaacgaa 61 acgcggacaa actatattta tgtaataaac gcaacgccgc agcgccaaag agttatgagc 121 agagcccgcg gcagcgacgg actatttagg cgaaccacgc acctctcggt cgacgacatc 181 aatcaaagtg caggcagctc aatcaattga ctccgtttgc tcagctcctc tcggccagaa 241 aacagaaacc aaaaatctat tcccccaaaa atcgcttccg atatattcta ctctccgtgt 301 gtgtgtgttg ctattttgcc gaaaaatcaa ataaaaaaca caaaacgcac acatacacta 361 gcgcgtgtgc aagacaacaa ataggaagag gaagagcaga cgccagctaa aaaaaaaata 421 tagccaaaaa gaagtggaaa taaattttcc cccgcaggag aagaacaaaa acgggggaaa 481 gcaactaaat aataattagt ggagcccaaa aagagcgcga aatattggga gagactctac 541 tttttttgcc accaaaaaac aacaaaaaaa actagaagcc ttgttatcga ttttattcga 601 ggggagggtg tgcgtgtgtg aagcgcgccc gcgtgcgggt gtgtgtgttg gtgtgtgctc 661 tcgccgcgtt atcaaaaaca acaacaattg gttgcaaagt aacagcaaaa ggagaatcga 721 atctttttag ccggttgcaa atcgtgccgt ctcgcttgca ccgcggtcaa tcgcgcgatc 781 gtggtcgatt tatcgaatta atcgcccccc aacaccccct aaacaagcga aaaaaatcaa 841 catagttcat ttatttcaaa tgatttcgct gctgcaaatg aaattccatg cgcttttgtt 901 gttgctatca aaagtctgga catgcatctg tttcatgttc aatcgccaag tgcgagctta 961 tcaaccggtt aaatatgaac tcttcccgct gtcacccgtc tcgcggcatc gcctgagcct 1021 ggtgcagcgc aagaccctcg ttctggacct ggacgaaacg ctcatccact cgcatcacaa 1081 tgcgatgccc aggaatacgg tcaagccggg cacgccgcac gatttcaccg tgaaagtgac 1141 gatcgatcgg aatccagtgc gcttcttcgt acacaagcga ccgcatgtgg actattttct 1201 ggatgtggtc tcgcagtggt acgatttggt ggtcttcacg gccagcatgg agatttacgg 1261 agcggcggtg gcggacaagc tggacaacgg acggaacatc ctccgaaggc gatactacag 1321 acaacactgc acgcccgact acggatctta taccaaggac ctgtcggcca tctgcagtga 1381 cttaaatagg atattcatca ttgacaattc gcccggggcc tatcgctgct tccccaacaa 1441 tgccataccc ataaagagtt ggttctccga cccgatggac acggcgctgc tgtcgctgct 1501 gcccatgctg gatgcgctga ggtttacgaa cgacgtgaga tcggtgctgt cgcggaatct 1561 gcacctgcac cgcctctggt agcaggtggg ccgcctgtcg ctagtgtagt ttatctattt 1621 agaaggagga ggaggaggag cagagaagtg agagtgggca agcggaggat accttctgaa 1681 attaacaaca aacatggtgg tgctgtgaca cattaacgaa ttttttcatt attattatgt 1741 ttaccattca gtcagattca gatgggcgaa gagaaacaca cacagagatg gtggagaaag 1801 tggaggagtt agcggatagg ttgggagatc tggaaatcta ttgatttttt ttctttttgt 1861 gtattaagat ttaaagtttt tgtaacatgc atatttgtcg atatatgtag accagctatt 1921 tttattatta tttacctttt tttttgtaat ttttttcgtt tgttctttgt gcgtgtatat 1981 tttttgatga taatatcaaa tggaaactct tgaacacagt atatatatat agagagagag 2041 atgagaagaa gtgaagttaa gcagaaagtg aagtaaacaa cattaagaac aaatttgtca 2101 agttatatat catattatta taaattaaat ctaaggccca cttacaacaa gagtcttgta 2161 atttctatat accatgatta caattaatta ttatgaaagt gaaattgttt tttatgaaga 2221 tacgacgaga cgcgaagcaa aaatacttat aattatacaa attagttgac tacgaaactt 2281 tcctggacat cattatatta tggataatta ttaaatgtaa ccgattctgt atagacttat 2341 acatatatat atgttctgcc ctcgtttcct gtacaaaaca aaacggacgg aagatctttc 2401 aagagtttca ttgcttgcaa accaaacata acacttttct aaggataaga tttttgtctt 2461 tcgagggagt tatatacatt tatataccta tatatatata catatatata tatacctaaa 2521 actaagcaac aactatgaac tactattaaa gtaaacaaca accaacaaca agcaagcaag 2581 tgaagaaggc aaaagcaaaa gttatatttt gtaaggcgag ccaacaacaa gtagcaaaga 2641 acattaaaaa tcccattaat tctgatcgga tcggatcgga tcagattaat gtatgtagca 2701 atgggccgca gactgggaca gatagtataa tatataggga gtttagagag ccaaatcact 2761 aattatacga gaaccgagtt agtctgagaa ttgagaaatc gtggcacatc atccgagagg 2821 catcacagga tattcagagg aaggcagcaa aagattaaaa ataaaaaaga aaggcgagag 2881 agaaagagta acaagtgaaa actgcttcca tagttaatgt tatttccaaa agcataaata 2941 cacaccactc taaactaaac taatcaacaa gaatgcttgc acacgcccct ttaccttaac 3001 atttaccttt acctttacct tttacccacc cctacctacc aaacacccaa aactacccta 3061 tccaattgtt ctttttatct atcgtattgt aaatttacaa caatcactat ttgtttattt 3121 attgcaagga aaacgagaat aatacgtgta tgcgatgttg ttaattttaa gtagtttgta 3181 gcaaatttgt taaaatgaaa cgtaaatgaa ataaatgaga aagggaacac aaaagcagaa 3241 aaacaattac aaaaaataca acaaaatcat gcaaaatcaa caa