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LOCUS XM_017139492 3290 bp mRNA linear INV 09-DEC-2024 1-like protein dullard (Dd), transcript variant X1, mRNA. ACCESSION XM_017139492 VERSION XM_017139492.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139492.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3290 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3290 /gene="Dd" /note="CTD nuclear envelope phosphatase 1-like protein dullard; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055914" CDS 858..1589 /gene="Dd" /codon_start=1 /product="CTD nuclear envelope phosphatase 1 homolog isoform X1" /protein_id="XP_016994981.1" /db_xref="GeneID:108055914" /translation="MISLLQMKFHALLLLLSKVWTCICFMFNRQVRAFIQYQPVKYEL FPLSPVSRHRLSLVQRKTLVLDLDETLIHSHHNAMPRNTVKPGTPHDFTVKVTIDRNP VRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRNILRRRYYRQHC TPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPMDTALLSLLP MLDALRFTNDVRSVLSRNLHLHRLW" misc_feature 1035..1541 /gene="Dd" /note="Dullard-like phosphatase domain; Region: HIF-SF_euk; TIGR02251" /db_xref="CDD:274055" misc_feature order(1053..1067,1077..1082,1242..1253,1263..1265, 1362..1364,1410..1415,1419..1427) /gene="Dd" /note="active site" /db_xref="CDD:319823" polyA_site 3290 /gene="Dd" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagcgtcgca acaaattggt cacactgtgc atgagggaat ttgttaaaca aaaacgaaac 61 gcggacaaac tatatttatg taataaacgc aacgccgcag cgccaaagag ttatgagcag 121 agcccgcggc agcgacggac tatttaggcg aaccacgcac ctctcggtcg acgacatcaa 181 tcaaagtgca ggcagctcaa tcaattgact ccgtttgctc agctcctctc ggccagaaaa 241 cagaaaccaa aaatctattc ccccaaaaat cgcttccgat atattctact ctccgtgtgt 301 gtgtgttgct attttgccga aaaatcaaat aaaaaacaca aaacgcacac atacactagc 361 gcgtgtgcaa gacaacaaat aggaagagga agagcagacg ccagctaaaa aaaaaatata 421 gccaaaaaga agtggaaata aattttcccc cgcaggagaa gaacaaaaac gggggaaagc 481 aactaaataa taattagtgg agcccaaaaa gagcgcgaaa tattgggaga gactctactt 541 tttttgccac caaaaaacaa caaaaaaaac tagaagcctt gttatcgatt ttattcgagg 601 ggagggtgtg cgtgtgtgaa gcgcgcccgc gtgcgggtgt gtgtgttggt gtgtgctctc 661 gccgcgttat caaaaacaac aacaattggt tgcaaagtaa cagcaaaagg agaatcgaat 721 ctttttagcc ggttgcaaat cgtgccgtct cgcttgcacc gcggtcaatc gcgcgatcgt 781 ggtcgattta tcgaattaat cgccccccaa caccccctaa acaagcgaaa aaaatcaaca 841 tagttcattt atttcaaatg atttcgctgc tgcaaatgaa attccatgcg cttttgttgt 901 tgctatcaaa agtctggaca tgcatctgtt tcatgttcaa tcgccaagtg cgagctttta 961 tccagtatca accggttaaa tatgaactct tcccgctgtc acccgtctcg cggcatcgcc 1021 tgagcctggt gcagcgcaag accctcgttc tggacctgga cgaaacgctc atccactcgc 1081 atcacaatgc gatgcccagg aatacggtca agccgggcac gccgcacgat ttcaccgtga 1141 aagtgacgat cgatcggaat ccagtgcgct tcttcgtaca caagcgaccg catgtggact 1201 attttctgga tgtggtctcg cagtggtacg atttggtggt cttcacggcc agcatggaga 1261 tttacggagc ggcggtggcg gacaagctgg acaacggacg gaacatcctc cgaaggcgat 1321 actacagaca acactgcacg cccgactacg gatcttatac caaggacctg tcggccatct 1381 gcagtgactt aaataggata ttcatcattg acaattcgcc cggggcctat cgctgcttcc 1441 ccaacaatgc catacccata aagagttggt tctccgaccc gatggacacg gcgctgctgt 1501 cgctgctgcc catgctggat gcgctgaggt ttacgaacga cgtgagatcg gtgctgtcgc 1561 ggaatctgca cctgcaccgc ctctggtagc aggtgggccg cctgtcgcta gtgtagttta 1621 tctatttaga aggaggagga ggaggagcag agaagtgaga gtgggcaagc ggaggatacc 1681 ttctgaaatt aacaacaaac atggtggtgc tgtgacacat taacgaattt tttcattatt 1741 attatgttta ccattcagtc agattcagat gggcgaagag aaacacacac agagatggtg 1801 gagaaagtgg aggagttagc ggataggttg ggagatctgg aaatctattg attttttttc 1861 tttttgtgta ttaagattta aagtttttgt aacatgcata tttgtcgata tatgtagacc 1921 agctattttt attattattt accttttttt ttgtaatttt tttcgtttgt tctttgtgcg 1981 tgtatatttt ttgatgataa tatcaaatgg aaactcttga acacagtata tatatataga 2041 gagagagatg agaagaagtg aagttaagca gaaagtgaag taaacaacat taagaacaaa 2101 tttgtcaagt tatatatcat attattataa attaaatcta aggcccactt acaacaagag 2161 tcttgtaatt tctatatacc atgattacaa ttaattatta tgaaagtgaa attgtttttt 2221 atgaagatac gacgagacgc gaagcaaaaa tacttataat tatacaaatt agttgactac 2281 gaaactttcc tggacatcat tatattatgg ataattatta aatgtaaccg attctgtata 2341 gacttataca tatatatatg ttctgccctc gtttcctgta caaaacaaaa cggacggaag 2401 atctttcaag agtttcattg cttgcaaacc aaacataaca cttttctaag gataagattt 2461 ttgtctttcg agggagttat atacatttat atacctatat atatatacat atatatatat 2521 acctaaaact aagcaacaac tatgaactac tattaaagta aacaacaacc aacaacaagc 2581 aagcaagtga agaaggcaaa agcaaaagtt atattttgta aggcgagcca acaacaagta 2641 gcaaagaaca ttaaaaatcc cattaattct gatcggatcg gatcggatca gattaatgta 2701 tgtagcaatg ggccgcagac tgggacagat agtataatat atagggagtt tagagagcca 2761 aatcactaat tatacgagaa ccgagttagt ctgagaattg agaaatcgtg gcacatcatc 2821 cgagaggcat cacaggatat tcagaggaag gcagcaaaag attaaaaata aaaaagaaag 2881 gcgagagaga aagagtaaca agtgaaaact gcttccatag ttaatgttat ttccaaaagc 2941 ataaatacac accactctaa actaaactaa tcaacaagaa tgcttgcaca cgccccttta 3001 ccttaacatt tacctttacc tttacctttt acccacccct acctaccaaa cacccaaaac 3061 taccctatcc aattgttctt tttatctatc gtattgtaaa tttacaacaa tcactatttg 3121 tttatttatt gcaaggaaaa cgagaataat acgtgtatgc gatgttgtta attttaagta 3181 gtttgtagca aatttgttaa aatgaaacgt aaatgaaata aatgagaaag ggaacacaaa 3241 agcagaaaaa caattacaaa aaatacaaca aaatcatgca aaatcaacaa