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LOCUS XM_017139491 2896 bp mRNA linear INV 09-DEC-2024 hydrolase MINDY-3 homolog (LOC108055913), mRNA. ACCESSION XM_017139491 VERSION XM_017139491.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139491.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2896 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2896 /gene="LOC108055913" /note="ubiquitin carboxyl-terminal hydrolase MINDY-3 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108055913" CDS 246..1961 /gene="LOC108055913" /codon_start=1 /product="ubiquitin carboxyl-terminal hydrolase MINDY-3 homolog" /protein_id="XP_016994980.2" /db_xref="GeneID:108055913" /translation="MNEEIVREQQQRGGEESTSSSSSVSPKTAAAAAATAAAAAASAS MTLASAALESQSPHSQPPAIGAGASSSPSPSPSGGQEKHPMNATDMRELRDIKQLLWG DNVREDVFKRWSQGFEFSKVEPSALVQKQGGPCAVIAPVQAYLLKIIIMSMSDAKLSE IPHDKCQTLLIQALCNILQNCRPPRYRIVHLLRRRVGNATEAAGSTKERSPVADLAGT AAASAAAAGLAEEAAAGGGGGEGVELAAEATPASVNELSQHGEHAEQDPHWELSPDEF HERLHTLHFEDIGAVARYYVDNYGQLAHTYGVLLFMYSVFLTKGSELVAADISDTSEP LIHSTYGYGGQSLINLMLTGRAVAHVWDNEQDVGGLKLRGICEQSDIGFITLMEQMRY CTVGSFFKNPRYPVWVMGSDTHLTVLFSNEKRLVSPETPSETGRRIFKSYDPEGNNFI STTMLRDVLAALNLVSEPAYVALMQKRLDPENLGIILLNAFMDEFFPLERRSTPDTFE LMHYNGIPGSNENNRVRYYCGSAILLEGDLKSICTSNPMVTCLQTKWPNIEINWHDAH MPSLN" misc_feature 534..1937 /gene="LOC108055913" /note="Deubiquitinating enzyme MINDY-3/4, conserved domain; Region: MINDY-3_4_CD; pfam13898" /db_xref="CDD:464029" polyA_site 2896 /gene="LOC108055913" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgataggcgc tatcgatact atcgacactg ttgcatttgc atttgccaaa aaaaaaagaa 61 cgaaaacgaa aaaaagctgg gcgaaaatgc caaccgaatt tggcaggcta atcgagtgaa 121 ttaatcgcgg atctaagcca gaatttgaac gcagcagctg accagcggac gagcggacga 181 gcggacgagc gacgagcgga gcggtaagag aagtgcatcc gttcagcgtt cagcattcgg 241 cggacatgaa cgaagaaatc gtgcgggagc agcagcagcg cggcggcgag gagtccacct 301 cgtcctcctc ctccgtctcg ccaaaaactg cagcagcggc ggcagcgacg gcggcggcgg 361 cagcagcgtc ggcgtcgatg acgttggcct cggcggcctt ggaatcgcaa tccccgcaca 421 gccagccccc cgccattgga gcaggtgcat cctcatctcc atcgccatct ccatccggcg 481 ggcaggagaa gcacccgatg aatgccaccg atatgcgcga actgcgcgac atcaagcaat 541 tgctgtgggg cgacaatgtg cgcgaagatg tattcaagcg ttggtctcaa ggattcgagt 601 ttagtaaagt ggagccgtcg gcattggtgc agaagcaggg cggtccttgt gctgtgatag 661 cgccggtgca ggcgtacttg cttaagataa ttatcatgag catgtcggac gcgaagctgt 721 cggagatccc ccacgacaaa tgccagacgc tgctgatcca ggcattgtgc aacatcctgc 781 agaactgtcg gccgccgcgc taccgcatcg tccatctctt gcgccgccgt gtcggcaacg 841 ctacagaggc tgctggttca accaaagagc gctcgccagt tgccgatctg gcaggaactg 901 ctgctgcttc tgctgctgcg gctggcctgg ccgaagaggc agccgccggc ggaggcggag 961 gagaaggcgt tgagctggcg gccgaggcca cacccgcctc ggtaaacgag ctatcccaac 1021 atggcgaaca tgccgaacag gatccgcact gggagctgtc gccggatgag ttccacgagc 1081 gcctgcacac gcttcacttc gaggatatcg gcgcggtggc ccgctactat gtggacaact 1141 acggccagct ggcgcacaca tatggcgtcc tgctgttcat gtactcggtg tttctcacca 1201 agggctcgga actggtggcc gccgatatat cggacacctc ggagccgctc atacacagca 1261 cctacggcta tggcggccag tcgctgatca atctgatgct aaccggccgc gccgtcgccc 1321 atgtctggga caatgagcag gatgtcgggg ggctcaagct gcgcggcatc tgcgagcaga 1381 gcgacattgg gttcataacg ctgatggagc agatgcgcta ctgcaccgtc ggctccttct 1441 tcaagaatcc gcgctatccc gtctgggtga tgggctccga tacgcattta accgttctgt 1501 ttagcaacga aaagaggctt gtctcgccag agacgccctc ggagacgggt cgtcggatct 1561 ttaagtccta cgacccggag ggcaacaatt tcatatcgac caccatgctg cgcgatgttc 1621 tggccgcctt gaatttggtc agcgagccgg cctacgtggc cctcatgcag aagcgtctgg 1681 atccggagaa cctgggcatc attctgctga acgccttcat ggacgagttc ttccccctgg 1741 agcgccgctc cacgccggac accttcgagc tgatgcacta caatggcata ccgggctcca 1801 atgagaacaa cagggtgcgc tactattgcg gatcggccat actattagag ggcgacctga 1861 agtcgatctg cacctcgaac ccgatggtca cctgcctgca gaccaagtgg cccaatatcg 1921 agatcaactg gcacgacgcc cacatgccgt ccttgaattg acgccgccaa ggggaaggag 1981 gtcagccgag gaaaccaaaa ggacgaagcc caggagtcac tggaacggag gagaaaccac 2041 agctgtagac acaacaagat agcacttttt tatttcaaac acccttcaaa gaattctttt 2101 ttttttgttt tttcgtattt atttgagcac ctttttttcc aaaaactgct ggagtggaac 2161 gcaccaacgc aaaccattaa caaaaaataa aagaaacata aacacaagtt acaaaacaca 2221 gcagctaagc actaagaaat gcgcttttga agagagctgc agccatgttg aagaggaatc 2281 ggcaggagaa tagaagattc acgccaagcg ttgactcaaa aacacataaa acacccaaaa 2341 aacagcaccc aaaatgatat tccatatttg caaatatgga aattaaaata aaaaatacaa 2401 aaaaaaggaa acagaaagag aaataagaag gggaaaaaga aagaacctac atctaataag 2461 aactcaaaac ttaatttcaa acattgtacg tttaaatttg cattgcaaaa acgaaacgaa 2521 actcaactaa aaatacaggc aacacaaata tacctttatg aataaactaa aactaaaact 2581 aaagaacaaa tcgtaattga gaattagaca aagcagaagc gaaagcgaaa gtataaacaa 2641 aatttgtttt tggcctttta acaaattact tgtagtgtta aacgatttaa taaaattaaa 2701 taaacacagg atgcataacg cataggagaa cctaacatca aagcgaaaga gacagggaaa 2761 cagggaaaga gagagagagc aaagcaaaga ttacttcgac gtgaaacaaa aaactaagta 2821 taaattaaca aagaataaaa acaaacaaat aattcaattt aaaaaataaa caaaaaacct 2881 aaaaatctca ttaaaa