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LOCUS XM_017139490 3996 bp mRNA linear INV 09-DEC-2024 component (Flacc), transcript variant X1, mRNA. ACCESSION XM_017139490 VERSION XM_017139490.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139490.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3996 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3996 /gene="Flacc" /note="Fl(2)d-associated complex component; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055912" CDS 171..3659 /gene="Flacc" /codon_start=1 /product="fl(2)d-associated complex component isoform X1" /protein_id="XP_016994979.2" /db_xref="GeneID:108055912" /translation="MEKKAKESLRRYKKAARHSATHSSSSDSTSDSDSGSSSYSSTDS EQGGGGGGGGGGGGGSGVGGGVGGPGGPPGHPHPHPHGGHHPRSAERHHRKKKSSRRG GSSSGDEPSSRRKRDKRDHVQKKLVAKRNHIKRKLKEARLKKRAAAALSGHVHRSLSP TTRAKLKKLAERKRLRAASKEQRERDKLRAVQRDRERDHHRLGSSRSPPSSSTTTTTK IRIHQDIVGKRQKSPGLGSGLGGGGSSSSSRMHHQLMSREKIIIQTRARGRTPSLERE RERERERERERERERHDLSLRERDRRDRERERAEREAARDKERAEALARCQERQRERE RLAREKLRRQEEEEGGGGGGKRGGPGRDLDLPPYGSRERSLDTVERERERERGGRHVR DKRELDPYEREQEYLEERHGHGLMDEMRRYRRRDLSPLPEHYAPRMRDPREMYSEEER ERAYKRAYLDARYSSREREAWLEARELRERELQGREYRDLEAEDSLYPDERERLIRDR ERDRERERERDRERERNIGPRGDFRPDWERDWDEEGGGGGGGGTGGPGPSGTPGRPPG GFVGGPKRGKPSTHPGGGPPPQQQQHHSASEPDWDADERERERERDRERDRDREDRPD GGGADRPSIKSEPAWLEHDQREKPRAWQQQQQQSSNSGGDWRDNDDAPPPPSNHPHPA SPHHHVHARGERGSGRGFRRGGGGGHHDHGERPGYRSHPPPLMTLPVQPPGGYSRGFP HKRLPYGGGRDAGGGGGGSSASFPKKQHAHAPLVSPTQTPLLNPLMNAGGGGGGSAAG KPNAAAQASAVAAATTAVAAAKAAAQSAANATTNPGILAQVSKLNAVCIKQEDASEDS AGTPELGAQDSPTQNLIGEGNPVKLEPMRSTAATVEGELSEISDSDDDILNKTDKVRP KSELPAEMDQEMEANGEEAKNECLQIKGEEVDEVLDFEEISDGELEEDARHKGIGDAL GVDWQGLIAETRQQASEAAAAAAQQGVDRGTSAKQRWQPHRVLLDMGISFGMAGESYA RRVMEEARQQLVQEKERERERRELDGDGEPPAKITSSLMDYREFLASSQQLEPLACVQ MGLRSAAAERQRLVGNVCGPGSRALSARQDLRLRRQLCGLPARECEFPRSVPIVGEGL RNLAMQMFQRRLLDVK" polyA_site 3996 /gene="Flacc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atacacgaca cagaaaaaga agaaaagtaa acgcgaaggg gacaacaaag cagaagggcc 61 aaataaacga tcggcgggga gaaaaacaaa agtaactagc taatattcaa ccggaaaggc 121 caagcaaagc cggcaaaacg gaggcgcgca ggctagcgga gatcgcggcg atggagaaga 181 aggccaagga gtcgctgcgc cgctacaaga aggccgcccg ccacagcgcg acgcactcga 241 gcagctcgga ctccacgtcg gattcggaca gcggcagcag ttcgtacagc agcacggaca 301 gcgagcaggg cgggggtggt ggtggcggag gaggcggggg cggtggctcc ggagtgggcg 361 gtggggtggg cggaccaggt ggcccacccg gccatccgca tccacatccg catggcggcc 421 atcatccgcg ctccgcggag cgacatcatc gcaagaagaa gagctcgcgg cgcggcggca 481 gctcctccgg cgacgaaccg tcgtcgcgtc gcaagcgcga taagcgggat catgtgcaaa 541 agaagctggt ggccaagcgg aatcacatca agcggaagct gaaggaggcg cggctgaaga 601 agagggcggc cgccgccctg agcggtcatg tccatcgctc cctgtcgccg acgacgcggg 661 ccaagctcaa gaagctcgcg gagcggaagc ggctgagggc cgccagcaag gagcagcgcg 721 agcgggacaa gctgcgcgcc gtccagcggg acagggagcg cgaccaccat cggctgggca 781 gcagcaggag tccgccgagc agcagcacca ccaccaccac caagatacgc atccaccagg 841 atatcgtggg caagcggcaa aagagtccag gtttgggttc cggccttggt ggcggcggga 901 gcagctcctc ctcgcgcatg caccaccagc tgatgtcgcg ggagaagatc atcattcaga 961 cgcgggcccg cggacgcact ccgtccctgg agcgggagcg ggaacgggag agggagcgcg 1021 aaagggagag ggagcgcgag cggcatgatc tctccctgcg cgagcgagat cgccgggatc 1081 gggagcgcga gcgtgcggag cgagaggcgg ccagggacaa ggagcgcgcg gaggctttgg 1141 cgcgctgcca ggagcgtcag cgggagcggg agcgcttggc ccgcgagaaa ctgcgccgcc 1201 aggaggagga ggagggcggc ggcggcggcg gcaagcgggg cggtcctggg cgagacttgg 1261 atctgccgcc ctacggcagt cgggagcgtt cgctggacac tgtggaaagg gaacgggaac 1321 gagaacgagg cggtcgtcat gtgcgcgaca agcgggagtt ggacccttac gagcgggagc 1381 aggagtatct ggaggagcga catggccacg ggctgatgga cgagatgcgg aggtatcgac 1441 gcagggattt aagtcccttg cccgagcact atgcgcccag gatgcgggat ccgcgggaaa 1501 tgtactccga ggaggagcga gagagggcct acaagcgcgc ctatctggac gcccgctact 1561 cgtcgcggga gcgagaggcc tggctggagg cccgcgagct gcgggagcgg gagctgcagg 1621 gacgcgagta ccgcgacctg gaggccgagg acagcctgta tccggacgag cgggagcgtc 1681 tgatccgcga cagggagcgg gatcgggagc gggaacggga acgcgacagg gagcgggagc 1741 gcaatattgg gccgcgcggc gatttccggc cggattggga gcgcgactgg gatgaggagg 1801 gcggcggcgg cggtggcggc ggtaccggtg gtcccggacc cagtggaacc cccggccgac 1861 cgcccggtgg ctttgtgggc ggacccaagc ggggcaaacc ctcgacgcat ccgggcggag 1921 gacctccgcc gcagcagcag cagcaccatt ccgcctcgga gcccgactgg gatgccgacg 1981 agcgggagag ggagagagag cgcgatcggg agcgtgacag agatcgcgag gatcgcccgg 2041 atggaggagg cgccgacagg ccttccatta aaagcgagcc cgcctggctg gagcacgatc 2101 agcgggagaa gccgcgcgcc tggcagcagc agcagcagca atcctcaaat tccggcggcg 2161 attggcggga caacgatgac gcaccgccac cgccatccaa ccatccgcat ccagcctccc 2221 cgcatcatca tgttcatgcg cgtggcgagc gaggatcggg aaggggattt cgacgaggcg 2281 gcggcggcgg ccatcacgat cacggcgagc gtcccggcta cagatcgcat ccgccgccgc 2341 tgatgacgct gcccgtgcag ccaccgggcg gctattcccg tggatttccc cacaagcgat 2401 tgccctacgg cggtggccgg gatgcaggag gaggaggcgg tggatcgtcc gccagctttc 2461 ccaagaagca gcatgcccat gcaccgctcg tctcgcccac gcagacgccg ctgctgaatc 2521 ctctaatgaa tgctggcgga ggaggaggag gaagcgcagc cgggaagccc aatgcagccg 2581 cccaggcgag cgccgtggcg gccgcaacca ccgcagtggc agccgcgaag gcggcggccc 2641 agagcgccgc caatgccacc accaatcccg gaatactcgc tcaggtgagc aaactgaacg 2701 cggtgtgcat caagcaggag gacgcctcgg aggactcggc tggcaccccg gagctgggcg 2761 cccaggattc gcccactcag aatctgatcg gcgagggaaa tcccgtgaag ctggaaccaa 2821 tgcgctcgac ggcagcgacg gtggagggcg agctgagcga gatcagcgac agcgacgatg 2881 acatactgaa caaaacggac aaggtgcggc ccaagagcga gctgcccgcg gaaatggatc 2941 aggaaatgga ggccaacggg gaggaggcca agaacgagtg cctgcagatc aagggcgagg 3001 aggtggacga ggtgctggac tttgaggaga tatccgatgg cgagctggag gaggacgctc 3061 ggcacaaagg catcggcgac gccctcggcg tggactggca gggattgata gccgagaccc 3121 ggcagcaggc cagcgaggcg gcggcggcgg cggcccagca gggcgtggat cgtggcacct 3181 cggccaagca gcgttggcag ccgcatcgcg tgctcctcga catgggcatt tcgtttggca 3241 tggccggcga gagctacgcg cgtcgcgtga tggaggaggc gcgccagcag ctcgtccagg 3301 agaaggagcg tgagcgggaa cgcagggaac tggatggcga cggagagccg ccggccaaga 3361 taacctcgtc cctgatggac tatcgtgagt tcctggccag ttcacagcaa ctggagccct 3421 tggcctgcgt gcagatgggt ctgcgcagcg ccgccgccga gcgccagcga ctggtgggca 3481 atgtctgtgg gccgggaagt cgagcgctga gtgctcgcca ggatctgcga ctgcgccgcc 3541 agctgtgcgg cctgccggcc cgcgagtgcg agttcccgcg cagcgtgccc atcgtgggcg 3601 agggactgcg aaatttggcc atgcagatgt tccagcgacg gctgctcgat gtcaaatgag 3661 atccgatgcc cggcgagatg atggagatga tggagaagga gatgatggat gaggggatga 3721 ggcggatgca ccgcaggcca cgtcactatc gactggacat acagatattc atggatggca 3781 aggagcgcgg ctaccgttcg cattactaga tgattgtgtt tgaattaagc ttgatttgtg 3841 tgaagtaaaa ctatctatat atatatatat taattggaat tgtgaattat acacatcttg 3901 atgtggattc ctctactatg caagttttaa agaattgtga atatcaactg catacgcatt 3961 acagaaatgt tcttaataaa agttattgtc ctatta