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LOCUS XM_017139459 4799 bp mRNA linear INV 09-DEC-2024 (fliI), mRNA. ACCESSION XM_017139459 VERSION XM_017139459.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139459.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4799 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4799 /gene="fliI" /note="FLII actin remodeling protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 161 Proteins" /db_xref="GeneID:108055902" CDS 155..3925 /gene="fliI" /codon_start=1 /product="protein flightless-1" /protein_id="XP_016994948.2" /db_xref="GeneID:108055902" /translation="MSVLPFVRGVDFTKNDFSATFPSSMRQMSRVQWLTLDRTQLAEI PEELGHLQKLEHLSLNHNRLEKIFGELTELACLRSLDLRHNQLRNSGIPPELFHLEEL TTLDLSHNKLKEVPEGLERAKNLIVLNLSNNQIETIPTPLFIHLTDLLFLDLSHNRLE TLPPQTRRLINLKTLDLSHNPLELFQLRQLPSLQSLECLKMSGTQRTLLNFPTSLDSL ANLVELDLSHNSLPKLPDCVYNVVTLVRLNLSDNELGELSAGVELWQRLESLNVSRNQ LVALPAALCKLPKLRRLLVNDNRLNFEGIPSGIGKLGALEVFSAANNLLEMVPEGLCR CGALKQLNLSCNRLITLPDAIHLLEGLDQLDLRNNPELVMPPKPSEASKATSLEFYNI DFSLQTQLRLAGAAVPPSMPATATPKDSTARKIRLRRGPRSEGDQDAAKVLKGMKDVA KDKDNELLLEDGKPESLKPKRWDESLEKPQLDYSKFFEKEDGQLPGLTIWEIENFLPN KIEEVVHGKFYEGDCYIVLKTKFDDLGLLDWEIYFWIGNEATLDKRACAAIHAVNLRN FLGARCRTVREEQGDESEEFLSLFETEVIYIEGGRTATGFYTIEEMIHITRLYLVHAY GATIHLEPVAPVADSLDPRHAFVLDLGTHIYIWLGERSKNTLNSKARLMAEKISKTER KNKCEIQLERQGEESAEFWLGLEMSPEELAVREPPKEHVPEDYQPVQPRLYQVQLGMG YLELPQVELPQQKLCHTLLNSKHVYILDCYTDLFVWFGKKSTRLVRAAAVKLSRELFN MMDRPDYALVMRVPEGNEMQIFRTKFAGWDEVMAVDFTRTAKSVAKTGANLTQWARQQ ETRTDLAALFMPRQSAMPLAEAEQLEEEWNYDLEMMEAFVLENKKFVRLPEEELGRFY TGECYVFLCRYCIPIEEPENVAEDGANPADESKSSAASGNNQPEDEIQCVVYFWQGRN AGNMGWLTFTFTLQKKFKAMFGEELEVVRIFQQQENLKFMSHFKRKFIIHTGKRKDKA LTAKGKAPVEFFHLRSNGGALTTRLIQINPDAVHLNSAFCYILHVPFETEDESQSGIV YVWIGSKSCNEEAKLVQDIAEQMFNSPWVSLQILNEGDEPENFFWVALGGRKPYDTDA EYMDYTRLFRCSNERGYYTVAEKCADFCQDDLADDDIMILDNGEHVFLWMGPRCSEVE VKLAYKSAQVYIQHMRIKQPERPRKLFLTMKNKESRRFTKCFHGWSAFKVYL" misc_feature 173..244 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 245..313 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature <287..1132 /gene="fliI" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 314..382 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 383..457 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 458..526 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 527..598 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 599..667 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 668..739 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 740..814 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 815..880 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 953..1021 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1016..1264 /gene="fliI" /note="Leucine rich repeat; Region: LRR_8; pfam13855" /db_xref="CDD:404697" misc_feature 1022..1096 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1097..1159 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 1166..1234 /gene="fliI" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275378" misc_feature 1619..1954 /gene="fliI" /note="Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins; Region: gelsolin_S1_like; cd11290" /db_xref="CDD:200446" misc_feature order(1667..1672,1787..1789,1805..1810,1814..1822, 1826..1834,1838..1843,1874..1876,1880..1882) /gene="fliI" /note="putative actin binding interface [polypeptide binding]; other site" /db_xref="CDD:200446" misc_feature 2000..2257 /gene="fliI" /note="Tandemly repeated domains found in gelsolin, severin, villin, and related proteins; Region: gelsolin_like; cd11280" /db_xref="CDD:200436" misc_feature 2333..2632 /gene="fliI" /note="Gelsolin sub-domain 3-like domain found in gelsolin, severin, villin, and related proteins; Region: gelsolin_S3_like; cd11292" /db_xref="CDD:200448" misc_feature order(2615..2617,2630..2632) /gene="fliI" /note="putative nucleotide binding site [chemical binding]; other site" /db_xref="CDD:200448" misc_feature 2906..3199 /gene="fliI" /note="Tandemly repeated domains found in gelsolin, severin, villin, and related proteins; Region: gelsolin_like; cd11280" /db_xref="CDD:200436" misc_feature 3263..3577 /gene="fliI" /note="Gelsolin sub-domain 5-like domain found in gelsolin, severin, villin, and related proteins; Region: gelsolin_S5_like; cd11288" /db_xref="CDD:200444" misc_feature 3287..3289 /gene="fliI" /note="putative nucleotide binding residue [chemical binding]; other site" /db_xref="CDD:200444" misc_feature 3605..3904 /gene="fliI" /note="Gelsolin sub-domain 6-like domain found in gelsolin, severin, villin, and related proteins; Region: gelsolin_S6_like; cd11291" /db_xref="CDD:200447" polyA_site 4799 /gene="fliI" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgtttgcat ggccgagcgg cggacggtca cctggctgct cttcctcttg ctcgttagtg 61 caaaaaaaaa caaaataaag aagaagaaac ggaaaacagg gccagcagct tgagcccaaa 121 atatataaca aatataacat tttatgtggt caaaatgagc gtgctgccgt tcgtgcgcgg 181 tgtggacttt acgaaaaatg atttcagcgc aacattcccc agctccatgc ggcagatgtc 241 gcgggtgcag tggctcacac tggatcgcac gcagctggcg gagattcccg aggagctggg 301 ccacctgcag aagctggagc acctgtcgct gaaccacaat cgcctggaga agatcttcgg 361 cgagctgacg gagctggcgt gcctgcgttc cctggatttg cggcacaatc agctgcgtaa 421 cagcggcatt ccgccggaac tctttcacct ggaggagctg accacgctgg atttgtcgca 481 caacaagctg aaggaggttc ccgagggcct cgagcgggcc aagaatctta tagttctcaa 541 tctgagtaat aatcaaatcg agaccatacc cacgccgctg ttcatccatc tgacggatct 601 gctcttcctc gacctctcgc acaatcgcct ggagacgctg ccgccgcaga cgcgccgcct 661 gatcaacctg aagaccctgg atctatcgca caatccgctg gagctcttcc agctgcgcca 721 gctgccctcg ctgcagagtc tcgagtgcct gaagatgagc ggcacgcagc gcaccctgct 781 caatttcccc accagcctgg atagcttggc caatctggtg gaactcgatt tgtcgcacaa 841 ttccctgccc aagctgcccg actgcgtgta caatgtggtg acgctggtgc gtttgaacct 901 aagcgacaac gagctgggcg aactgagcgc cggcgtggag ctgtggcagc gcctcgagtc 961 gctgaatgtg tcgcgcaatc aactggtcgc cctgcccgcc gccctctgca agctgcccaa 1021 gctgcgccgg ctgctggtga acgacaacag gctgaatttc gagggcatac cctcgggcat 1081 tggcaagctg ggcgctctgg aggtcttctc ggcggccaac aatctgctcg agatggtgcc 1141 cgagggcctc tgccgctgcg gagcgctgaa acagctcaac ctgagctgca atcggctgat 1201 aaccctgccc gatgccattc acctgctcga gggtctcgat caactggatt tgcgcaacaa 1261 tccggagctg gtgatgccac cgaagccaag cgaagccagc aaggcgacca gtctggagtt 1321 ctacaacata gattttagtt tgcaaacgca gctacgcttg gccggcgccg ctgtgccgcc 1381 ctccatgcct gcgacggcca cgcccaagga ttcgacggcc aggaagattc ggctgaggcg 1441 cggtccgcgc agcgagggcg atcaggatgc ggccaaggtg ctcaagggca tgaaggatgt 1501 ggccaaggac aaggataacg agctgctact cgaagatggg aagcccgaat ccctgaagcc 1561 aaagcgctgg gacgagtcgc tggagaagcc gcaactggac tactccaagt tcttcgagaa 1621 ggaggatggc cagctgcccg gtttgaccat ctgggagatc gagaacttcc tgcccaacaa 1681 aatcgaggag gtggtgcatg gtaaattcta cgagggcgac tgctacattg tcctcaaaac 1741 gaagttcgat gatttgggcc tgctggattg ggagatctac ttttggattg gcaacgaggc 1801 gacgctggac aagcgtgcct gtgccgccat tcatgccgtg aatctgcgga actttctggg 1861 cgcccggtgt cgcacggttc gcgaggagca gggcgacgag tccgaggagt ttctgtcgct 1921 cttcgaaacg gaggtcatct acatcgaggg cggacgcacg gccaccggtt tctataccat 1981 cgaggagatg atacatatca cccggctgta tttggtgcac gcctacggcg ccaccataca 2041 tctggagccc gtggctcccg tcgcagactc cctggatccc cggcacgcct ttgtcctcga 2101 tctgggcacg cacatttaca tttggctggg cgagcgatcg aagaatacgc tgaactcgaa 2161 ggcacgcctg atggcggaga agatcagcaa gacggagcgc aagaacaagt gcgaaattca 2221 gctggagcgg cagggcgagg agagtgccga gttctggctg ggattggaga tgtcgccgga 2281 ggagttagcc gttagggagc cgcccaagga gcacgttccc gaggactatc agccggtgca 2341 gccgcgcctc taccaggtgc agctgggcat gggctatctg gagctgccgc aggtggagct 2401 gccgcagcag aagctctgcc acacgctgct caacagcaag catgtctaca tactcgactg 2461 ctacaccgat ctgttcgttt ggtttggcaa gaagtcgacg cgcctggtgc gagcggcggc 2521 cgttaagctg agccgggagc tcttcaacat gatggatcga ccggattatg cgctcgtgat 2581 gcgcgtgccc gagggcaatg agatgcagat cttccgcacc aagttcgccg gctgggacga 2641 ggtgatggcc gtcgatttta cgcgcacagc caagtcggtg gccaagacgg gtgcaaatct 2701 gacgcagtgg gcgcgacagc aggagacgcg aacggatctg gcggcccttt tcatgccccg 2761 gcagtcggca atgccgctgg ccgaggccga gcagctggag gaggagtgga actacgatct 2821 ggagatgatg gaggcctttg tgctggagaa caagaagttt gtccgcctgc ccgaggagga 2881 gctgggtcgc ttctacactg gggaatgcta tgtcttcctc tgtcgctact gcatacccat 2941 cgaggagccc gaaaatgtcg cagaagatgg tgctaatccc gcggatgaga gtaaatcatc 3001 ggcagccagc ggcaacaatc agccagagga tgagatccag tgcgttgtct acttctggca 3061 gggacgcaat gccggcaaca tgggttggct gacgttcacc tttacgctgc agaagaaatt 3121 caaggccatg ttcggcgagg aactggaggt ggtgcgcatc ttccagcagc aggagaacct 3181 caagttcatg tcgcacttca agcgcaagtt catcattcac accggcaagc ggaaggacaa 3241 ggcgctgacc gcgaagggca aggcgcccgt cgagttcttc cacctgcgtt cgaacggcgg 3301 tgcgctcacc acgcgcctca tacaaatcaa tccggatgca gtgcatctca attcggcctt 3361 ctgctatata ctccatgtgc catttgaaac ggaggacgaa tcgcagtcgg ggattgtgta 3421 tgtgtggatt ggcagcaagt cctgcaacga ggaggccaag ctggtccagg acatcgccga 3481 gcagatgttc aactcgccct gggtgagcct gcagattctc aacgagggcg acgagccgga 3541 gaacttcttc tgggtggctt tgggaggtcg caagccctac gacacggacg ccgagtacat 3601 ggactacacg cggctgttcc ggtgctccaa cgagcgcggc tactacacgg tggccgagaa 3661 gtgcgccgac ttttgccagg acgatctggc cgacgacgac ataatgatcc tggacaacgg 3721 cgagcacgtc ttcctctgga tggggccgcg ctgcagcgag gtggaggtga agctggccta 3781 caagtccgcc caggtgtaca tccagcacat gcggatcaag cagccggaga ggccgaggaa 3841 gctcttcctc acgatgaaga acaaggagtc gcgccggttt accaagtgct tccacggctg 3901 gagcgccttc aaggtgtatt tataatttta ggcaactaaa agggggcatt gtcgagggct 3961 tcggttcttt aatatgttaa attaatttat gcacagcccc aaaggtgtac gtttaacttt 4021 tacatatttc aagagatcgc ctttaaggcg gtcattcgtt tgtatcattt aaatgggcct 4081 cctgaatttt acaggatcca cagaaacgcc ccagccggtt gtgcatttat ttgttgagca 4141 tttaaagaag cgccttttag atgctatttt agttttataa aatcgataaa ggcaccttag 4201 aggtgttaac ttaattttaa caagttagag gagccccttg caggtgtaaa atcggggaaa 4261 gggggttggg cagctgccgt gacagagcag ctgccccaca gacgcatgac aaaaaaaaaa 4321 ggaaaaaaac cctatcgaaa aaaagaaaca aaaacgaaca gaaaaagaaa caaaaaacaa 4381 acccatcaga tcgcaagaag aacatgtttg tacttttata aaatgtattt aattgttttg 4441 tataattaat ttaaattttt tttattagct cacttgctcc cgcccttaac taattagcta 4501 acaactccaa caacgccaag tattcgccca ctctttacga gaaaacctta taaaatatat 4561 ataatttaaa tatatatata tctatatata tgcctaaaaa tacgcaatat ttatatacat 4621 atgctgagct gagaggattg ctattactcc ttgcgctagt ccttttaaaa tgttaaccta 4681 cttaaagcta gcctgtaata aaatcgaaag aaagaaaaca ctaaaactaa ttgtacaaat 4741 gccacgtatt tattttattt ttattaatcc ccctgaataa acatttagaa aaattgcaa