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LOCUS XM_017139362 2479 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017139362 VERSION XM_017139362.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139362.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2479 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2479 /gene="gt" /note="transcription factor giant; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108055826" CDS 744..2141 /gene="gt" /codon_start=1 /product="protein giant" /protein_id="XP_016994851.2" /db_xref="GeneID:108055826" /translation="MLMHEKLMAGQFFDLKTDRKPLMHHHQYQHHQTHHQQQSLHHLP HGQLPVQGSLGLPKMDLYAAYAYQQQLLGAALSQQQQQQQQQQQQQHQQLQQQQHQSS AEVLDLSRRCDSVETPRKTPSPYQTSYSYGSGSPSASPTSNLLYAAQMQQQQQQHQQQ QQQQQQQQQLASLYPAFYYSNIKQEQATPPAAPAKVTPTASLLQTFAAASAAAAAAAA ASSSSAAASTNSPRPASNASTMQIDVLENPQSPAVEATTPTTSASASESKNTRPFKAF PRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSR SGSVNEGSSSNNNSESEDRAAAEESSDCDSQAGNFEGKSSSASSSGHLASATGVGSGI SHSGSQVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDAL KAQLAAFTSAKAATA" misc_feature 1941..2114 /gene="gt" /note="Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain; Region: bZIP_HLF; cd14695" /db_xref="CDD:269843" misc_feature 1944..2114 /gene="gt" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:269843" misc_feature order(1962..1967,1971..1979,1983..2000,2004..2012) /gene="gt" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:269843" misc_feature order(2007..2009,2016..2021,2028..2033,2037..2042, 2049..2054,2058..2063,2070..2075,2079..2084,2091..2096, 2100..2105) /gene="gt" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:269843" polyA_site 2479 /gene="gt" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtagatatat cccccttatc atccaaacac acactgttca aatgcaagac tctacaatca 61 agaaaccgca tagtcgttat tgtttgcttt ttacggaaaa ttacgcagct cagccggatt 121 aaaaaatctc aataacaata tatataattc aatgcaagta caaataatta tcaaccaatt 181 cgtcgaaaac caaatgtaaa tcacttcaga gctgcgcgaa tttccccgtt ttttcctcat 241 tgaaccttat tataacccca gaaaaaaatc atatcctttc gcgggaactg gtgaagtaaa 301 aaaagttctc aaactctttt tactttttgt taaattacgc taaatggcga agtaacaatg 361 gcacaaagag ccaagatttt tgcgaaaaat gcgaaaacca aaggaaaggg gcagccgcac 421 cctcgtaaaa tcgtaaaacc ctttcgaagg cggccagaca gagagagaaa caggggtaag 481 agagagatag acagcggccg aatcacccct ttgccctttg taccgcctac ctgcttcgta 541 ccgcttcggc tggccgctcg tgtccgccat ttcctccgca ctttgggtat aaattgcggg 601 ggttccgacg agaggaaatc agtttgcgtt cgacatcgtc agcgtgaaga tacatagata 661 gcaacagcaa gatcgccggt ctatatagac tataccaagc catcgctcag ttggattaaa 721 cccagaaacg cacaccaagc accatgctaa tgcacgagaa actcatggcc gggcagttct 781 tcgatctcaa gaccgatcgc aagcccctga tgcaccacca ccagtaccag caccaccaga 841 cgcaccacca gcagcagtcg ctgcaccact tgccgcacgg ccaactgccc gtccagggat 901 ccctcggtct gcccaagatg gatctgtatg ctgcctatgc ctaccagcag cagttgctgg 961 gagctgccct cagccagcag cagcagcagc agcaacagca gcagcagcag caacatcagc 1021 aactgcagca gcagcaacac cagtcctccg ccgaggtcct ggatctttcc cgtcgctgcg 1081 acagcgtgga gacgcccagg aagacaccct cgccctatca gaccagctac agctacggca 1141 gcggctcccc ctcggcctcg cccaccagca acctcctcta cgccgcccag atgcaacagc 1201 agcagcagca acatcagcag cagcaacaac agcagcagca acagcagcag ctggcttccc 1261 tgtatcccgc tttctactac agcaatatca agcaggagca ggccacgccc ccggctgccc 1321 cggccaaggt cacgcccacc gccagcctcc tgcagacctt cgctgccgcc tctgccgcag 1381 ccgccgccgc tgctgcagcc tcctcctcct ccgccgccgc ctcgaccaac tcgccgcggc 1441 ccgccagcaa tgccagcacc atgcagatcg atgtcctcga gaacccacag tcgccggcag 1501 tggaggccac cacgcccacc acctccgcct ccgcctcgga gagcaagaac acgcgcccct 1561 tcaaggcctt tccgagggat cccctggtca tagcggccaa cttcgccgcc accgatgtgc 1621 tgctcgacaa tccgcgagtg gagcgctaca cggagtaccg caagcgggtg ctcgagcaga 1681 tccgcagctc caacggggga tcgcgcacgg tgaccaaccc gaagatgcgc cggaccaact 1741 cgaggagcgg ctccgtgaac gagggcagct cctcgaacaa caacagcgag agcgaggatc 1801 gggctgcggc cgaggagtcc agcgactgcg actcgcaggc gggcaacttc gagggcaagt 1861 cctcctccgc cagcagctcc ggccatttgg ccagcgccac gggcgtggga tcgggcatca 1921 gccactcggg cagccaggtg aaggatgccg cctactacga gcggcgccgc aagaacaacg 1981 ccgccgccaa gaagtcccgc gaccgtcgcc gcatcaagga ggacgagatc gccatcaggg 2041 ccgcctatct ggagcgccag aacatcgagc tgttgtgcca gatcgacgcc ctcaaggccc 2101 agctggccgc cttcacctcc gccaaagcgg ccaccgccta aaagtccatt cctcccttga 2161 tgcgttgaac gcgaagatcc gaatcctgta catgctgttt tctgggtcag cttatctgtg 2221 aatagtttag ggggctcaac tttctctttt ttttagcaca cactcgcatt taagtactgt 2281 aagtccttgg agtatacgtt atatttgtaa aatgtattag ccgtaagtgc atctcgcaat 2341 ccaaccagtt aactaatcaa tcgaaccacc ccatagttgt agaggtccag gtcccagcta 2401 gccattagta attagccagt aagtgaattt ttttcataac cctaagaaat aaatactaaa 2461 ataaattatg caaaaataa