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LOCUS XM_017139359 2149 bp mRNA linear INV 09-DEC-2024 TFIID subunit 4 (LOC108055824), mRNA. ACCESSION XM_017139359 VERSION XM_017139359.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139359.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2149 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2149 /gene="LOC108055824" /note="transcription initiation factor TFIID subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108055824" CDS 191..1570 /gene="LOC108055824" /codon_start=1 /product="transcription initiation factor TFIID subunit 4" /protein_id="XP_016994848.2" /db_xref="GeneID:108055824" /translation="MMASSHVAFVAWAVFALLLTHGGGVVDARRNQGNNQRKTSSSSS SSSNYGHVTQPSYNTNGHAAGGNSHADVAKLSYPNYNSQPNRPAAAGAGAPGAAPQPG WNVPQGPPPAYSASNPAGGARPNMHEPPPAYHAPNYGAAPPSYGAATGSNLHQPQYSG VPAGATYYPAGGHAGGYPSNIPAGATYYPSAGHVPMGGGYHPAAAAPPPGATYYQAGS ALPPGATYYSAPPQQSSSGLGFGTGLLAGGLGGALLGHALTPSGGSSSSSQPVAAAPA ATGQDRIIIINNGVPVNASDGTTVINAGGVAAAPMAPSNVTQDVAAAPPMAPMAPFNP EASNMTAPAADAPPPPPAAGGIICVPTKVNETDPADSSKMVEVEKIACYPAPPPPAAP AGEGPAPLAPMAPAQPGSQQVQQAQDVAAPVQASVKANTSGAHSWTGGVSMLLMLFCG VMAKRFAGF" misc_feature 635..1339 /gene="LOC108055824" /note="Domain of unknown function (DUF4813); Region: DUF4813; pfam16072" /db_xref="CDD:435117" polyA_site 2149 /gene="LOC108055824" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctggccacat tgcaaaaagt gaaatttata acgaaaataa ccgacaagag ttaaccagtt 61 tcgcgcggac aaacgaaggc agctgcaaaa acgcgtagaa gcatcagctc agcgtcattc 121 aaaacgagtt tcttctcacc ctgctcttct ctacgggcga agcactctat aatccgggat 181 taccgatcac atgatggcct ccagtcacgt cgccttcgtg gcctgggcgg tgtttgccct 241 gctgctgacg cacggcggcg gtgttgtgga cgcccggcgt aaccagggca ataaccagcg 301 caagacctcc tcctcctcct ccagctcctc caactacggt cacgtgacgc agcccagcta 361 caacacgaat ggccatgcag ccggcggcaa ttcgcatgcg gatgtggcca agctgagcta 421 ccccaactac aactcccagc cgaatcgccc agcagcagca ggagctggag caccaggagc 481 ggcccctcaa ccgggctgga atgtgccgca gggtccgccg cccgcctact ccgcctccaa 541 tcccgccggc ggtgcccgac ccaatatgca cgaaccgccc ccggcctacc atgctcccaa 601 ctacggagca gctcctccga gctacggagc agccaccgga tcgaatctgc atcagccgca 661 gtactcgggc gtgccggctg gagccaccta ctatccggcc ggaggacacg ccggcggcta 721 tccctcgaac atacccgccg gagccaccta ctatccatcc gccggacatg tgcccatggg 781 tggtggctat catcccgcgg ccgctgctcc gccgccggga gccacctact accaggcggg 841 atcggccctg ccacccggag ccacctacta ctcggcgccg ccacagcaat cctcctctgg 901 cctgggcttc ggcactggtc tgctggccgg cggcctgggc ggtgctctgc tgggccacgc 961 cctcacgccc tcgggcggca gctcctcctc ctcgcagccg gtggccgcag ctccggcagc 1021 cactggccag gatcgcatca tcatcatcaa caatggggtg ccggtgaatg ccagcgatgg 1081 caccactgtg atcaatgcag gcggagtggc tgctgccccc atggctcctt ccaatgttac 1141 ccaggatgta gcagcagcac ctcccatggc tccaatggct cccttcaatc ccgaggcctc 1201 caatatgacg gctcctgcag cggatgctcc tcctccgccg ccggcggctg gcggcatcat 1261 ttgcgtgccc accaaggtga acgaaacgga tccggccgac agcagcaaga tggtggaggt 1321 ggagaagatc gcctgctatc cggcgcctcc gccgccggca gctccggctg gcgagggacc 1381 ggctccgctg gctcccatgg cgcccgccca gccgggatcg cagcaggtgc agcaggccca 1441 ggatgtggcg gcgcccgtgc aggcgtccgt caaggccaac accagtggag cccactcctg 1501 gacaggagga gtgtccatgc tcctcatgct cttctgcgga gtgatggcca agcgctttgc 1561 cggcttctaa ggggaacgac gcttctggaa tgttcccaac cccaatacta ctactaccta 1621 ctgtactgta ccttcctccc cagctttttt cgcgtggcct tggccggcag ggtggcttat 1681 ttgtaaatct acttgcacgc cgctggccaa gatcgataat tccaggcgct aattggacga 1741 aaattgttaa tttatgccgc accatctccg attgcagtat tcgtggataa acaagctggc 1801 ctcccagttt agaattcccc cttttccagc tcggccttca attgtgatga ttgggtggga 1861 ataaccatcc cccaacccaa gctcaaaagc aaaaacattc gaataaacct aaaccggtat 1921 atatgaataa ccctatacga tatatgatat atgcaaaccc tactcaaaag accctcaact 1981 aaagacaaag tgaacgcaag ttctcactaa aagtgtatat ttttctagaa ttgttagcgt 2041 aattgttgct tgttttttgt attgttgtaa gcaaactaca tgtatttgtt gcactcaatt 2101 gttgaattaa ataaaaataa aagctttcgc ctacacccat agcactcga