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LOCUS XM_017139358 1963 bp mRNA linear INV 09-DEC-2024 (wds), mRNA. ACCESSION XM_017139358 VERSION XM_017139358.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139358.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1963 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1963 /gene="wds" /note="WD repeat-containing protein wds; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108055823" CDS 332..1417 /gene="wds" /codon_start=1 /product="protein will die slowly" /protein_id="XP_016994847.1" /db_xref="GeneID:108055823" /translation="MVPIGAVHGGHPGVVHPPPQPLPTAPSGPNSLQPNSVGQPGATT SSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAY DGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVF CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCT ACHPTENIIASAALENDKTIKLWKSDT" misc_feature <518..1414 /gene="wds" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 554..667 /gene="wds" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 683..793 /gene="wds" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 806..916 /gene="wds" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 935..1042 /gene="wds" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1061..1171 /gene="wds" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1193..1306 /gene="wds" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1322..1402 /gene="wds" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" polyA_site 1963 /gene="wds" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttttgttatt tattagagtg accataattg ttattatttt cacgtgtggc acagcgagcc 61 aaaaaaccaa gcgcccgcta aaataaacaa agcgcaggcc gaccagaacg aagcccggtc 121 accaccggaa acaggagcag cgcccagcgg accgcaatcg cccgaggacc acacgccacc 181 agcgcggcgg cgttcccccc ttttcgccgg aacagcagga agaagaagca cgtgtgcggc 241 gtgccgaaaa agaaaagaaa cgggcaaaat aaacaaggag gcgaactaag atcgggagca 301 accagaaaac aaggagcagg aggacgaagc aatggtgccc atcggagccg tccatggcgg 361 ccatcccggc gtagtgcatc cgccgccgca gccactgccc acggcgccca gcggtcccaa 421 ttcgctgcag cccaattcgg tgggccagcc gggggccacc acctcctcga acagcagcgc 481 ctccaacaag agctccctct cggtgaagcc caactacacg ctcaagttca ccctggccgg 541 gcacaccaag gcggtctcgg cggtcaagtt tagtccgaat ggcgagtggc tggccagctc 601 ctccgctgat aaactcatca aaatctgggg cgcctacgat ggcaagttcg agaagaccat 661 ttcgggccac aagctgggca tcagcgatgt ggcctggagc tcggactcgc ggctcctcgt 721 cagcggcagc gatgacaaga cgctcaaggt ctgggagctg agcaccggga agagtttgaa 781 gacgctgaag gggcacagca actatgtgtt ctgctgcaac ttcaatccgc agtcgaatct 841 aattgtctcc ggcagcttcg acgagagcgt tcgcatttgg gatgtgcgca ctggcaagtg 901 cctgaagacc ctgcccgccc actcggatcc cgtttcggcg gttcacttca atcgcgacgg 961 ctcgctgatc gtgagcagca gctacgacgg gctgtgccgc atctgggaca cggccagtgg 1021 ccagtgcctg aagaccctga tcgacgacga caatccgccc gtgagctttg tcaaattctc 1081 gcccaacggc aagtacatcc tggccgccac gctggacaac acgctcaagc tgtgggacta 1141 ctcgaagggc aagtgcctga agacgtacac gggccacaag aacgagaagt actgcatatt 1201 cgccaacttc tcggtgacgg gcggaaagtg gatcgtcagc ggcagcgagg acaacatggt 1261 ctacatctgg aatctgcaga gcaaggaggt cgtgcagaag ctgcagggac acaccgacac 1321 cgtgctgtgc accgcctgcc atcccacgga aaacatcatc gcttccgcgg cgctcgagaa 1381 cgacaagacc atcaagctgt ggaagtcgga cacatagagt ggctggtatc cagctggagc 1441 agcttcagac acatacattt cttggataaa tactatgtta aaggaaaaag tctaattata 1501 attttaatac cctttttttt gtacacataa tttaacggag gaacccttaa attctacttt 1561 taaatcacaa ttacaaaaac tcacattcta aggcagaaca gaaaaaccac aaaacaaaac 1621 aaaaaaaaac acaaaaaatc ggaaaaacaa attaatgtat aaatatttat tagcctattg 1681 tattggccac caaacaagcg agaatattcc cccaaaaatg tttgtaacct ttgacacagc 1741 cacacaccca caaaaactta tgatgatctt tcggtgacga gaaaactaaa tttaagcaaa 1801 acacacacac aggtgcttgg ggcaaaaccc gagcgccaga aagaatatat ataaaatacg 1861 aaatgtaaat tttgaataaa agaaaacacg tcctcgggga cgcttgagtg tcctggcacc 1921 ttgagcgctc ctcgaggcga gtcacttatt tgtaatagtt taa