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PREDICTED: Drosophila takahashii Zeste-white 10 (Zw10), mRNA.


LOCUS       XM_017139346            2343 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017139346
VERSION     XM_017139346.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017139346.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2343
                     /gene="Zw10"
                     /note="Zeste-white 10; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 Proteins"
                     /db_xref="GeneID:108055814"
     CDS             111..2273
                     /gene="Zw10"
                     /codon_start=1
                     /product="centromere/kinetochore protein zw10"
                     /protein_id="XP_016994835.2"
                     /db_xref="GeneID:108055814"
                     /translation="MEEAVPRSKLLAEVFQGNGNGCASVDATQSAILKVLTRVNRFQE
                     RVQKHIDDNYTEFMPNHTSPDLFLEESASLSREIHDLLETVGSEGLGALEEANAKLAR
                     SGRQLREILLGLAVSEHVLKIDELFQCVEEEKATKDYLAILDLVSRLRAFVYGEDADP
                     PVASVEVRRVFQALDCYETIKVKYHVQAYLLQQTLQERFDRLVQLQSKSFPTSRCVTL
                     QVSRDQAQLQDIVQALFQEPYNPAALCEFLLDNCIEPLILRPVMAEYSEEDADSGSHV
                     RLSLSYATGKPSSEQLRPNYKQVLENFRLLLQTLAGINSSVSSSGQHVFSIIGDHVKD
                     KMLQLLVDECLIPAVPETMEEYQSATLCEDVTQFEQLLADCFLINPEHDRALGRFVEQ
                     YDTYYRNRLFRRVLETAREIIQRDLQDMVLVAANNGPTEVASDPFLFPRCMISKSAQD
                     YVKLMDRILRQPTEKAGESEADPLTGVISIMLHTYIDEVPKVHRKLLDSIPQQAVLFH
                     NNCLYLTHWVAQHASKEIENLAALAKTLQATGQQHFRVQVSYQSSILMEIMQGFEFES
                     PHTLGSAPLKLVRQCLRQLELLKNVWANVLPETVYNATFCELINTFVAELIRRVFTLR
                     DISATMACELSDLIDVVLQRAPALFGEPNEVVQVPSWLKLQQLKAMMNASLKEITELW
                     CDGAGPLTASYNADEIRHLIRALFQDTDRRAKAITQIA"
     misc_feature    213..1664
                     /gene="Zw10"
                     /note="Centromere/kinetochore Zw10; Region: Zw10;
                     pfam06248"
                     /db_xref="CDD:461861"
     polyA_site      2343
                     /gene="Zw10"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttttgaacg ctattcgccg atagagtcgc caccgaacaa gttgtggaat ttaccctgtc
       61 tttcgcgata atttgcctag aggaggaagg aaccaggacg agatcaggaa atggaggaag
      121 cggtgccgcg ttccaagctg ctggcggagg tgttccaggg caatgggaac ggatgcgcca
      181 gcgtggacgc cacccaatcg gccattttga aagtgctgac gcgggtgaat cgcttccagg
      241 agcgcgtcca gaagcacata gatgacaact acacggagtt catgcccaac cacacctcgc
      301 cggacctctt cctcgaggag tccgcttcgc tgagccggga gatccacgat ctcctcgaga
      361 cagtgggctc cgagggactg ggcgccctgg aggaggcgaa tgccaagttg gcgcggagtg
      421 gaaggcagct gcgcgagatc ctcctgggcc tggcggtcag cgagcatgtg ctcaagatcg
      481 acgagctgtt ccagtgcgtg gaggaggaga aggccaccaa ggattacctg gccatcctgg
      541 atctggtcag ccgtttgagg gccttcgtct atggcgagga tgctgatccg ccggtggcct
      601 cggtcgaggt gcgacgcgtc ttccaggcgc tcgactgcta cgagaccatc aaggtgaagt
      661 accacgtcca ggcgtatctg ctgcagcaga cgctccagga gcgcttcgat cgtttggtgc
      721 agctgcagag caagtccttc cccacctcgc gctgcgtcac gctgcaggtg agccgggatc
      781 aggcccagct gcaggacatc gtgcaggccc tcttccagga gccctacaat ccggccgcgc
      841 tctgcgaatt cctgctggac aactgcatcg agccgctcat cctgcggccc gtgatggccg
      901 agtatagcga agaagatgcc gactctgggt cccacgttcg tctctccctc tcctatgcca
      961 ccggcaagcc cagctccgag cagctgcgtc cgaactacaa gcaggtgctg gagaacttcc
     1021 ggctgctgct gcaaacgctg gccgggatca acagcagcgt gtcgtccagc ggacagcatg
     1081 tgttcagcat catcggggat catgtgaagg acaagatgct gcagctgctg gtggacgagt
     1141 gcctcatacc ggctgtgccc gagaccatgg aggagtacca gtccgcgacg ctgtgtgagg
     1201 atgtcaccca gttcgagcag ctgctggccg actgcttcct catcaatccc gagcacgatc
     1261 gagcactggg gcgatttgtc gagcagtacg acacctacta ccgcaatcga ctgtttcggc
     1321 gagtcctgga gacggcgcgc gagatcatcc agcgggatct gcaggacatg gtgctggtgg
     1381 cggccaacaa cgggcctacc gaggtggcca gcgatccctt cctcttcccg cgctgcatga
     1441 tctcgaagag tgcgcaggac tacgtcaagc tgatggaccg catcctgcgg cagcccacgg
     1501 aaaaggcggg cgagagcgag gcggatcccc tgaccggcgt catctccatc atgctgcaca
     1561 cctacatcga tgaggtgccc aaggtgcacc gcaagctgct ggacagcatt ccccagcagg
     1621 cggtgctgtt ccacaacaac tgcctgtatt tgacccactg ggtggcccag catgccagca
     1681 aggagatcga gaatttggcg gctttagcca agacgctgca ggccacaggg cagcagcatt
     1741 tccgcgtgca ggtcagctac caatcctcca ttctcatgga gatcatgcag ggcttcgagt
     1801 tcgagagtcc gcacaccctg ggctccgctc ctctgaaact ggtgcgccag tgccttcgtc
     1861 aactggaact gctcaagaac gtgtgggcca atgtgctgcc ggaaacagtg tacaatgcca
     1921 ccttctgcga actgatcaac acctttgtcg ccgagctcat ccgtcgcgtt ttcacgctgc
     1981 gcgacatttc cgccacaatg gcctgcgagc tgagcgacct catcgacgtg gtgctgcagc
     2041 gggcgcccgc cctcttcggc gagccaaacg aagtggtgca agtgcccagc tggctgaagc
     2101 tgcagcagct gaaggccatg atgaacgcct cgctcaagga gatcacggag ctgtggtgcg
     2161 acggcgccgg gccgctgacc gccagctaca acgccgacga gatcaggcac ctcatccggg
     2221 cgctcttcca ggacacggat cgtcgggcca aggccatcac gcagattgca taggaatgga
     2281 gttactgaaa tatattttga taatatcgag ttgtaaataa ttatatatca cgtcttaaat
     2341 tga