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LOCUS XM_017139326 2733 bp mRNA linear INV 09-DEC-2024 (LOC108055803), mRNA. ACCESSION XM_017139326 VERSION XM_017139326.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139326.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2733 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2733 /gene="LOC108055803" /note="protein SPT2 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108055803" CDS 78..1910 /gene="LOC108055803" /codon_start=1 /product="protein SPT2 homolog" /protein_id="XP_016994815.2" /db_xref="GeneID:108055803" /translation="MDFGALLHYAKKKNDAATKDEATGQGKYYSTKYAPPKKESKESK QLSNNIQKFLRKKEAEEAERKREERQKLNELMAKRDEKSKNKIRKMLKVTKSANKSVL EDAKDGGGDGGDAAHEAGEGQGDDYGYVSNEANAFYEKYIEKVRDVQEDKGFAPSRPQ SLRDLSGTKERVKAAITREREEARSHTRQRSSNSTPSSSSSSSKSKDPSVARSYSTSR TLYDPEAERREEERKKRLEEEQRRAKVKRPAQPPPMDFQALLRLAEKKQHEPVVFEPE KKKETERLLSAREKREMEERQRLKEQRALRDKMREAEPAKAATNRMEPNGRIPKLNQG KPATNPPSDGFKKPSAAPAKGSSSSSSSSSYNSHSSSNRSPASSTKPAVAASKTAPSA KPGVTASAAAAGKSSSSSSSKATAPTPSKNPYAAAIKNGAVREFPPRDRPAAAPAARP AAPAGKTRPFPPADVQRSSSGRQFPPADVQRSSGGRQFPPADVKRRKPQEQPGNKRRI YDDEDEDEYDSELDDFIDDGDCEEDISSHIRDIFGYDKRRYRGLDDDDRGMESSFAQM QREEFISKKLGMQEDLEDMRMEAAHKKQKMAKKRCKRIDDDDDD" misc_feature <1647..1877 /gene="LOC108055803" /note="SPT2 chromatin protein; Region: SPT2; pfam08243" /db_xref="CDD:462407" polyA_site 2733 /gene="LOC108055803" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttaaaaccg tttcaccatc tggtaacact gtagccaaaa taaaagggaa ataattttgt 61 gacacggata cgacgaaatg gatttcgggg cgctgctgca ctacgcgaag aagaaaaacg 121 atgcggccac caaggacgag gccaccgggc agggcaaata ctacagcacc aagtatgcgc 181 cgcccaagaa ggagtccaag gagtccaagc agctgtccaa caacatccag aagttcctgc 241 gcaagaagga ggccgaggag gcggagcgaa agcgcgagga gcgccagaag ctcaacgagc 301 tgatggccaa aagggacgaa aagtccaaaa ataagataag gaaaatgctc aaggtgacca 361 agtcggcgaa taagtcggtg ctggaggatg ccaaggatgg gggcggcgat ggaggagacg 421 ctgcccacga ggcgggcgaa gggcagggcg atgactatgg ctatgtgtcc aacgaggcga 481 atgccttcta cgaaaagtac atcgagaagg tgcgcgatgt gcaggaggac aagggctttg 541 cgcccagccg accgcaatcc ctgcgagatc tctcggggac caaggagcgc gtcaaggcgg 601 ccatcaccag ggaaagggag gaggccagga gtcacacgcg tcagaggagc agcaatagca 661 ctccctcttc cagcagctcc tcctccaaat ccaaggatcc cagcgtggcc cgctcgtata 721 gcacctcgcg tactctgtac gatccggagg ccgagcggcg ggaggaggag cgcaagaagc 781 ggctggagga ggagcagcgc agggccaagg tgaagcgacc agctcagccg ccgcccatgg 841 atttccaggc cctgcttcgc ctggccgaga agaagcaaca tgaaccggtc gtttttgaac 901 ccgaaaagaa gaaggaaacg gagcgcctgc tgtccgccag ggagaagcgc gaaatggagg 961 agcgacagcg gctgaaggag cagcgcgccc tgcgcgacaa gatgcgggaa gcggagccag 1021 ccaaagccgc aaccaatcgc atggagccca acggacgcat acccaagctg aatcaaggga 1081 agccggcgac gaatcccccc agtgatggct tcaaaaaacc ctcagcagcg ccagcgaagg 1141 gcagctccag ctcctctagc tcctctagtt acaattccca ttcctctagc aaccgcagtc 1201 ccgcctcaag tacaaaaccc gccgtcgccg ctagtaaaac agctccctcc gctaagccag 1261 gagtaactgc atccgcagcg gcggcgggta aaagcagctc cagcagttct agtaaagcga 1321 ccgctccaac tccctccaaa aatccctatg cggcggccat taaaaacgga gctgtgcggg 1381 agtttccacc cagggatcga cctgctgctg ctcctgctgc tcgtccagct gctccggcgg 1441 gcaaaacgcg accatttccg ccagcagatg tgcagagatc ctcaagcggc aggcagtttc 1501 caccagcgga tgtccagaga tcctcgggcg gcaggcaatt cccgccagcg gatgtcaaga 1561 gacggaaacc acaagagcag ccgggcaata aaagacgcat ttacgacgac gaggatgagg 1621 acgagtacga ttcggagctg gacgacttca tcgatgatgg cgactgcgaa gaggatatat 1681 cgtcgcacat tcgcgacatt ttcggctatg ataagcggcg atatcgcgga ctggacgacg 1741 atgaccgggg aatggagtcc agctttgcgc aaatgcagcg cgaggagttc atcagcaaga 1801 agctgggaat gcaggaggat ctggaggata tgcgcatgga ggcggcgcac aagaagcaaa 1861 aaatggccaa aaagcgatgc aagcgcatcg acgacgacga cgatgattag ttcgctgtcc 1921 tgcaaatctc aaatatccga tgctgaatcc aggagctgtg cctgttgagt ttatttacct 1981 acatatatat atatatatct ggagatattg tttagttagt tatgtgccct agtttaccat 2041 aagcatacac aaaaacacac acgcggtatg tgcgcctata tatagaccat ctataatcat 2101 ctatttttgc tatctaaaaa cggaaactta cagaaaatga agctaacttc ggctagccga 2161 tgtcgtaata ttataaatat accaacgaaa agggtataaa tatatatatt tcacttttgc 2221 ttcgcttcac ataagaatgc aaatgaaatg cgtcgaatta atcgaccgca gggctttgaa 2281 cctttgtgaa aaaaaaacgc tttgttgcct tgaaaagtgt cattctcaaa atcaaaacca 2341 gtttttaccc tatatttggt gtattctttt tttcttattt cttttcattt gccaatccaa 2401 ttttacatgt acatttagtt aggcccaaaa taaaccttaa tagattcaat tgaacacccc 2461 gatatttgta atttggaatg aacagaccgg aaactgggtc atgtgacatc gtttggttgc 2521 ttaattagct tatttttata atttcagagt aagaaatcga tcgaaaaagt aatggaaaaa 2581 taagtaaaaa atttaactta cgatttcttc gaattttcgg tatataaact tgaacttgcc 2641 gacgttagct tccttttctg ttataaagtg catttaaata tatgcatttg tatactttgg 2701 taacaaacga gatctcccaa aagagaacct ata