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LOCUS XM_017139325 2996 bp mRNA linear INV 09-DEC-2024 (LOC108055802), mRNA. ACCESSION XM_017139325 VERSION XM_017139325.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139325.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2996 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2996 /gene="LOC108055802" /note="probable RNA-binding protein 19; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055802" CDS 113..2881 /gene="LOC108055802" /codon_start=1 /product="probable RNA-binding protein 19" /protein_id="XP_016994814.2" /db_xref="GeneID:108055802" /translation="MSRIIVKQLPKHITEDKLRQIFGAQGTITDLQLKYTPDGKFRQF CFVGYSSEAEAQSAIQHFNNTCIQTSRVRVESCAALGSEEKPQSWSKYAKDSKKNLEK LKAKEEEEAAAREAKDAKKKNKEKKLDKVEQILGRHKDDPEFQEFLQAHDKSRTLWGN DLGVASNQEEEQQDGEDEDEEEPPAGRDDSGVDADAGEDDQEEEEEDGDTSKLAEKPI SDLEYMKSLMAAPTSSSKGATKSKTKSDKSNLELFTIKIHNVPYNTKRQEVLKFFKPL KPYSVRLPSKVHGFCYVGFKTEKDMAKGMLKNKSFIKGKQVFFSDFTEKNKVTKANKS GQPVTNAGEATGNAKWKHQQDSLSKEDDISESGRIFFRNLAYTTTEEELRKLFEQFGP VVEVNLPVDKLTRKIKGFGTVTYMMPEHALKAFNSLDGTDFHGRLLHLLPGKDIEKNP QEELDENDASLSFKEKKALKLKKSAQKPIGWNTLFLGGNAVAEILAKQFKTSKERILD TSDGGSGAAVRLALGETQIVIEMKRFLEEEGVRLNAFDEPAKKRSNTVILAKNLPAAT ETSELTPIFSRFGPIGRIVLPPSGVTALIEFCDPLEARQAFKKLAYSKFKNAPLYLEW APEQVFTKTLSGEPVIPKTELKEEEKPEKPEVKKVEEKEEEEQKPLAEDADDEPEPNT TLFLRNLNFKTVQETVEQHFRHLGTIHTVEIAKRRDPENPRNFNSLGYGFIQFKKNSV AEHALKNLQLTHIDGNPVELKRSDRVLKTQDNEGAQRRLASQKKQTGTKILVRNIPFQ AQYREVRDIFKAFGELRSLRIPKKATTGEEAHRGFGFVDYMSKAEAKRAFDALSASTH LYGRRLVLEWSANDDNQDVEELRKRTAAKFGDSQAAASAKRSRKSFFDVEGSVQPNQD DDDEEEER" misc_feature 116..343 /gene="LOC108055802" /note="RNA recognition motif 1 (RRM1) found in RNA-binding protein 19 (RBM19) and similar proteins; Region: RRM1_RBM19; cd12564" /db_xref="CDD:409980" misc_feature <818..>1426 /gene="LOC108055802" /note="polyadenylate binding protein, human types 1, 2, 3, 4 family; Region: PABP-1234; TIGR01628" /db_xref="CDD:130689" misc_feature 1205..1441 /gene="LOC108055802" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" misc_feature 1775..1990 /gene="LOC108055802" /note="RNA recognition motif 4 (RRM4) found in RNA-binding protein 19 (RBM19) and similar proteins; Region: RRM4_RBM19; cd12569" /db_xref="CDD:409984" misc_feature 2156..2401 /gene="LOC108055802" /note="RNA recognition motif 5 (RRM5) found in RNA-binding protein 19 (RBM19 or RBD-1) and similar proteins; Region: RRM5_RBM19_like; cd12318" /db_xref="CDD:409757" misc_feature 2474..2713 /gene="LOC108055802" /note="RNA recognition motif 6 (RRM6) found in RNA-binding protein 19 (RBM19) and similar proteins; Region: RRM6_RBM19; cd12571" /db_xref="CDD:409985" ORIGIN 1 gccaagttgc cagcacagac cgctgataca cgtgcgcgtg ttttgatttg ttcgtaaaca 61 aaaatgccct taaattgaat ttaaagctta attattacga tttacccaca agatgtcgcg 121 cattatagtg aagcagctgc ccaagcatat caccgaggac aaactgcgtc agattttcgg 181 tgcccaggga acaattacgg atctgcagct gaaatacacg cccgatggca aattccggca 241 gttctgcttc gtgggctaca gctccgaggc ggaggcccag tcggccatcc aacacttcaa 301 caacacctgc atccagacca gccgggtgcg cgtcgaatcc tgtgccgctt tgggcagcga 361 ggagaagccc caatcctgga gcaagtacgc caaggacagc aagaagaacc tggaaaagtt 421 aaaagccaag gaggaggagg aggcggctgc cagggaggcc aaggatgcca agaaaaagaa 481 caaggagaag aagctggaca aagtggagca gattctgggc aggcacaagg atgatcccga 541 gttccaggag tttctgcagg cgcacgacaa gtcgcgcacc ctgtggggca acgatttggg 601 cgtggccagc aaccaggaag aggagcagca ggatggtgaa gatgaagatg aggaggagcc 661 accagctggc agggatgaca gtggcgtgga tgccgatgca ggggaagatg accaagagga 721 ggaggaggaa gacggcgaca ccagcaagct ggccgagaag cccatcagcg atctggagta 781 catgaaatcc ctgatggcgg cacccacatc ctcctccaag ggagcaacca aaagcaaaac 841 caagtcggac aaatccaacc tggagctgtt caccatcaag attcacaatg tgccgtacaa 901 cacgaagcgc caggaggtgc tcaagttctt caagccgctg aaaccctatt ccgtgcgtct 961 ccccagcaaa gtgcacggct tctgctacgt gggcttcaag acggaaaagg acatggccaa 1021 ggggatgctg aagaacaaga gcttcatcaa gggcaagcag gtcttcttct ccgactttac 1081 cgagaagaac aaggtgacca aggcgaacaa gagtgggcaa cccgtaacga acgctgggga 1141 ggcgacaggc aatgccaagt ggaagcacca gcaggacagt ttgtccaagg aggacgacat 1201 ctccgagtcc ggccgcatat tctttcgcaa tctggcctac accaccacgg aagaggagct 1261 ccgcaagctg ttcgagcaat ttggtccagt ggtggaggtc aatcttcccg tcgacaagct 1321 gacgcgaaag atcaagggct tcggcacggt gacctacatg atgccggagc acgccctcaa 1381 ggcgttcaac agcctggacg gcacggattt ccatggccgc ctgttgcacc tgctgcccgg 1441 caaggatatc gaaaagaatc cgcaggagga gctggacgaa aacgatgcca gtctgtcgtt 1501 caaggagaag aaggcgctga agctgaagaa gagcgcccag aagccaattg gctggaatac 1561 cctgttcctg ggtggcaatg cggttgccga aatactggcc aagcaattca agacctccaa 1621 ggagcgcatt ttggacacca gcgacggtgg cagcggtgcc gccgtgcgtt tggctctcgg 1681 cgaaacccaa atagtcatcg agatgaagcg ttttctcgag gaggagggcg tccggctgaa 1741 tgccttcgat gagccggcca aaaagcgttc caacactgtg atactggcca agaatctgcc 1801 ggcggccacc gaaacctccg agctaacgcc cattttcagt cgctttggtc cgattggcag 1861 gattgtcctt ccgcccagcg gcgttacggc gctcatcgag ttctgtgatc cactggaggc 1921 gaggcaggcc ttcaagaagc tggcctacag caaattcaag aatgccccgc tctatttgga 1981 gtgggcaccc gagcaggtct tcaccaagac gctcagcggc gagccggtga ttcccaaaac 2041 ggaacttaag gaggaggaaa agccagagaa gccagaggtt aagaaggtgg aggaaaagga 2101 ggaggaggag cagaagcctc ttgcagaaga tgccgatgat gaaccggaac caaacaccac 2161 cctcttcctg cgcaatctga acttcaagac ggtgcaggag acggtggagc agcacttccg 2221 ccacctgggc accattcaca ccgtggagat agccaaacgc cgggatcccg agaatccgcg 2281 caacttcaat tccctgggct atggcttcat tcagttcaaa aagaactcgg tggccgagca 2341 tgcgctcaag aacctgcagc tcacccacat cgatggcaat cccgtggagc tcaagcgcag 2401 cgatcgggtg ctcaaaaccc aagacaacga gggagcacaa cgtcgactgg cctcgcagaa 2461 gaagcaaact ggcaccaaga tcctggtgcg gaatattccc ttccaggcgc aataccgcga 2521 agttcgagac atattcaagg cctttggcga gctgcgttct ctgaggattc ccaagaaggc 2581 caccaccggc gaggaggcgc atcgcggctt cggcttcgtt gactacatgt ccaaggcgga 2641 ggccaagcgt gccttcgatg ctctgagcgc cagtacccat ttgtacggcc gccgtttggt 2701 cctcgagtgg agcgccaacg atgacaacca ggacgtggag gagctgcgca agcgaacggc 2761 ggccaaattc ggtgatagcc aggcggcagc gtcggcgaaa cgcagcagga aatccttctt 2821 cgatgtggag ggcagtgtgc agccaaatca agatgatgac gacgaagagg aggaacgatg 2881 atgataatcc cccgtagtta gttagcttaa agtttgattc agatgtataa agtacaagat 2941 gtaaacaaaa atataaatta taattttata aaatcaaatg gagagaaaac cctgcc