Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017139311 1196 bp mRNA linear INV 09-DEC-2024 3 (Vha36-3), transcript variant X1, mRNA. ACCESSION XM_017139311 VERSION XM_017139311.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139311.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1196 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1196 /gene="Vha36-3" /note="Vacuolar H[+] ATPase 36kD subunit 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108055792" CDS 230..982 /gene="Vha36-3" /codon_start=1 /product="V-type proton ATPase subunit D 2 isoform X1" /protein_id="XP_016994800.1" /db_xref="GeneID:108055792" /translation="MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRF RLILGKIIETKTLMGQVMKEAAFSLAEVKFTTGDINQIVLQNVTKAQIKIRTKKDNVA GVTLPVFEPYTDGVDTYELAGLARGGQQLAKLKKNYQSAVRLLVELASLQTSFVTLDD VIKVTNRRVNAIEHVIIPRINRTIEYIISELDELEREEFYRLKKIQDKKREARKASDK KREEQRRLGQLTEETKEVQNILDEDGDEDLLF" misc_feature 272..850 /gene="Vha36-3" /note="ATP synthase subunit D; Region: ATP-synt_D; pfam01813" /db_xref="CDD:460343" polyA_site 1196 /gene="Vha36-3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aacgagtctt cattcgctgg cccagtttgt tgtcgtgctg ttctgttcgc tgttccctca 61 tttctgtcgt ctattttatt ttcgtagtgt cgcatatatt tagtaaatat tttgttgttg 121 ttatttatag ttcggacttg gttggcgtgg tgcgtgttgt atttttgttt ttcctttttt 181 tttttgttaa ttttttgttc ctgagtggca tatttttgtt tgatttttga tggcagccaa 241 agaccgtctg cccatatttc cctcacgtgg tgcccaaacg ctgatgaaat cgcgtttggc 301 gggcgcaacc aagggacatg gactgctcaa gaaaaaagca gatgccctgc agatgcgctt 361 tcgtctgatt ctgggcaaga tcatagagac caaaaccctg atgggccagg tgatgaagga 421 ggccgccttc tcgttggccg aggtcaagtt caccaccggg gacatcaacc agattgtcct 481 gcagaatgtg accaaggccc agatcaagat acgcaccaaa aaggataatg tggccggggt 541 cacgttgccc gttttcgagc cctatacgga tggcgtggac acctacgagt tggccggcct 601 ggcacgtggt ggccagcagc tggccaagct gaagaagaac taccagagcg cagtgcgtct 661 gctggtggaa ctggcctcat tgcagacctc ctttgtgacc ctcgacgatg tcatcaaggt 721 caccaatcgg cgggtcaatg ccatcgagca cgtgatcatc ccccgcatca accgaaccat 781 tgagtacata atcagtgagc tggatgaatt ggagcgcgag gagttctatc gactgaagaa 841 gatccaggac aagaagcgtg aggcacgcaa ggcatccgac aagaaacgcg aggagcaacg 901 tcgtctgggc caactgaccg aggagaccaa ggaggtgcag aatatcctcg atgaggacgg 961 tgacgaggat ctgctcttct agagccgatg ccacatccat tataccttat cccaacataa 1021 ccatacacca accacctgct gctacgcccg acgaacccaa tcactcaact ctgctacctc 1081 acaacctccc atcaaaagac cacctctctg tttttcgttg ttgtcgttca ttgtgatccg 1141 gatgttgtac cacttgtcgt tcttggaaat acaatccgta atcgtaacct ctgtga