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LOCUS XM_017139257 2202 bp mRNA linear INV 09-DEC-2024 ciliary (LOC108055764), mRNA. ACCESSION XM_017139257 VERSION XM_017139257.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139257.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2202 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2202 /gene="LOC108055764" /note="dynein intermediate chain 3, ciliary; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108055764" CDS 200..2164 /gene="LOC108055764" /codon_start=1 /product="dynein intermediate chain 3, ciliary" /protein_id="XP_016994746.2" /db_xref="GeneID:108055764" /translation="MYQNQFIYSRERRRFGRQCCFQDRNELMVSVQPSGRQRLKYVMR NPAAQATQLSGQMALTVMETENVTLDQHGMYHSEGGWPKEVNPWDEEQTQRHRKKVER EDSWGEQVLDMIRSTMAVAEQNNTLNIYQNFFADLPADLAHDIRMRFRARVANVFHDL WLPSRHLNSIEWMPNNERQFMAQFTNQFGKEERLRLVTDEPVGDMNSFYVWNVKNPLK PKISFDSREPVSLAKICPKDENNMVGGTGLGQVCLWSTFKGGMPVRNCPLEVSHRETT SALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQDRQSRQSRMDSHG VTVLEFEYTIPVRFIIGSDMGHVFVGNRKGMTPTETLLANYKLFAGPVRSINRNPFFV KNFLVTGDWRARIWSEEAKDAPSTMYFRKKTQITCGAWSTGRCSLFVTGDMNGVVDFW DLLLHQRLPILSVDFKVAIADVVFRPNGDLLAIALQNGDSHILTLDESMRQATGKEKA LMAAMFEREIVRSKLLEARYDEVRLKRKTLLMAEEDRVRQEQSMAPALELDPDNPDQF VKMIEGDEEFRTAISEFQEMILSVERKRSKRQVKMERTVFEEWNPADERLQGEPVIYT RPEPKVQLLGNLDNRHSSEPRNSQGSARFK" misc_feature 446..>637 /gene="LOC108055764" /note="Domain of unknown function (DUF4765); Region: DUF4765; pfam15962" /db_xref="CDD:374256" misc_feature <824..1141 /gene="LOC108055764" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; Region: WD40; cl29593" /db_xref="CDD:475233" misc_feature 884..1006 /gene="LOC108055764" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1028..1183 /gene="LOC108055764" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1202..1315 /gene="LOC108055764" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature <1295..>1663 /gene="LOC108055764" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 1343..1453 /gene="LOC108055764" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1472..1549 /gene="LOC108055764" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" ORIGIN 1 cctacctagt caaacatact taaaacacaa caccaaaaaa cagacaacat ttgttaaaaa 61 ctagaaaaca aaagaaaagt tataattaac acgggtggag gaacagaacc acactttatc 121 ccttggcgta gccgagaaat ccttggttct gcagaggacc atagttcctg gggagctgca 181 ggctgatcca ctaaccgcca tgtaccagaa ccagttcatc tactcccgcg agaggcgtcg 241 cttcgggcgg cagtgctgct tccaggaccg caacgagctg atggtcagcg tgcagccgag 301 cggccgccag cggctgaagt acgtcatgcg gaatcccgcg gcgcaggcca cccagctgag 361 tggccagatg gcgctcacgg tcatggagac ggagaacgtg accctcgacc agcacgggat 421 gtaccacagc gagggcgggt ggcccaagga ggtgaatccc tgggacgagg agcagacgca 481 gcggcaccgc aagaaggtgg agcgcgagga tagctggggt gagcaggtcc tggacatgat 541 tcgcagcaca atggccgtgg cggagcagaa caacaccctg aatatctacc agaacttctt 601 tgccgatctg cccgccgatt tggcccacga cattcggatg aggttccgtg cgcgggtggc 661 caatgtcttc cacgatctct ggctgccctc acgccacctg aactccatcg agtggatgcc 721 caacaatgaa cgccagttca tggcgcagtt caccaatcag tttggcaagg aagagcgcct 781 ccgtttggtc accgatgagc cagttggcga tatgaactcc ttctacgttt ggaatgtaaa 841 gaatcccctg aagccgaaga tctccttcga cagccgggag ccagtgtcgc tggccaagat 901 ctgtcccaag gatgagaata atatggtggg gggcactgga ctggggcagg tctgcctgtg 961 gagcaccttc aagggcggca tgccggtgcg caattgcccc ctggaggtgt cccaccggga 1021 gaccacctcg gccctctgct gggtccactc caagtccaac acggagttct actcggggtc 1081 gctggacggc tcgatcaagt actgggacac cagggacctc aagatgccca tgcaggagct 1141 gctccttgag ccggagccgc aggatcgcca gtcgcgccag tcgcgcatgg attcgcacgg 1201 ggtgacggtg ctggagttcg agtacaccat cccggtgcgc ttcatcattg gcagcgatat 1261 gggtcatgtg ttcgtgggca accgcaaggg aatgacgccc acggagacgc ttctggccaa 1321 ctacaagcta tttgccggtc cggtgaggag catcaaccgg aatcccttct tcgtgaagaa 1381 cttcctcgtc acgggagatt ggcgggcgag gatctggtcg gaggaggcca aggatgcacc 1441 gtcgaccatg tatttccgga agaagacaca gatcacctgc ggagcctgga gcactggtcg 1501 ctgctccctg ttcgtgactg gcgatatgaa cggagtggtg gacttctggg atctcctgct 1561 ccaccagcgg ctgcccattc tctccgttga cttcaaggtt gcgattgcgg acgtggtctt 1621 ccggccgaac ggggatctgc tggccatcgc cctccagaac ggcgacagtc acatcctcac 1681 cttggacgag tccatgcgac aggcgacggg caaggagaag gcgctcatgg cagccatgtt 1741 cgagcgtgag atcgtgcgta gcaaactttt agaggcccgc tatgatgagg tgaggctcaa 1801 gcggaaaacc ctcttgatgg ccgaggagga tcgtgtgcgg caggagcaga gtatggcacc 1861 tgctctcgag ctggatcccg acaatcccga ccagtttgtg aagatgatcg agggcgatga 1921 ggaattccgc acggccatca gtgagttcca ggagatgata ctcagtgtgg agagaaagcg 1981 ctccaagagg caggtaaaaa tggagcgcac ggtcttcgag gaatggaatc cggcagatga 2041 gaggctccaa ggggaaccgg ttatatacac acgacccgaa ccgaaggttc agcttttagg 2101 gaacctcgat aataggcact cttcagagcc aaggaattcc caaggatcag ccagatttaa 2161 atgaaatgta atacgaaaaa atcatattga gaaactcaca gt