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LOCUS XM_017139252 1980 bp mRNA linear INV 09-DEC-2024 (LOC108055759), mRNA. ACCESSION XM_017139252 VERSION XM_017139252.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139252.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1980 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1980 /gene="LOC108055759" /note="WD repeat-containing protein 46; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108055759" CDS 100..1917 /gene="LOC108055759" /codon_start=1 /product="WD repeat-containing protein 46" /protein_id="XP_016994741.2" /db_xref="GeneID:108055759" /translation="MTKTAPKGRPKAKTPYKRYFEAEKDTKAAKDDGRLEYVKLKSKN QQNFTGDFIKMQDRTKKPRPPKAPIVEEPKNQKKHPIPEEILQKYSRGEQVQPKGVKT RHFKEQQTRREIYLEYATEQAARTELLHQETAGQLEADQGETTAEYRQSQIADNVDLQ SSAKHFSLNMEFGPYQMRYTKNGRHLLLGGRRGHVAAFDWVTKRLHCEFNAMESVEDV QWLHVPTMYAVAQKSWVYMYDKKGTELHCIKRLNRVNRLDFLPYHFLLAAGNSAGYAS WLDVSIGELVGNFNTGLGDIRLMRHNPRNGVLCIGGGRGVVSMWSPKVREPLAKLLCH STAMTALTVDPKGQHLVTAGLDRAVKVWDIRMLVNDKPLTHFQLRLAANELDVSQRGM LALSQGTYLETYADLLSGGGSGDGTRLPYIRQRCDAFVHGLRFCPYEDVLGVATAKGF QSLLVPGAGEPNFDALEDNPYETSKQRREHEVHALLEKIPPELITLDPHEITGVDAPT LQEKIDAKRRLFHVKAPRINMKSRHKMKGRGGTAKAARNKQIVKDGKRREFIAEVREA KKSLIKQHAVKEEGAKGKTKAPRSVLDRFKPKPPKKQKT" misc_feature <622..1194 /gene="LOC108055759" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 622..723 /gene="LOC108055759" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 745..852 /gene="LOC108055759" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 859..969 /gene="LOC108055759" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 988..1095 /gene="LOC108055759" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1111..1230 /gene="LOC108055759" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1357..1593 /gene="LOC108055759" /note="BING4CT (NUC141) domain; Region: BING4CT; smart01033" /db_xref="CDD:198101" polyA_site 1980 /gene="LOC108055759" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaagaagaag aagcagcacg tgctcgttgt tgtcgccttc aaattacttt tgtttttagc 61 cagtttttaa gttattaccg ccttgccgcc gccaccagga tgaccaaaac agcgcccaag 121 gggcgcccga aggccaagac gccctacaag cgctacttcg aggcggagaa ggacacaaag 181 gcggcgaagg acgacggccg cctggaatat gtgaagctga agagcaaaaa ccaacagaat 241 ttcaccgggg atttcattaa aatgcaggac aggaccaaga agccgcgtcc cccgaaggct 301 ccgatcgtcg aggagccgaa gaaccagaag aagcacccca ttcccgagga gatcctgcag 361 aagtactcac gtggcgagca agtgcagcca aaaggcgtga agacgcgcca cttcaaggag 421 cagcagacgc ggcgggagat ctacctggag tacgccaccg agcaggctgc ccgcacggag 481 ctcctccacc aggagaccgc tggccagctg gaggcggacc agggtgaaac caccgccgag 541 taccggcaat cccagatagc cgacaacgtg gatcttcagt cttcagccaa acacttcagt 601 ttgaacatgg aattcgggcc gtatcaaatg cgatacacca agaacggtcg gcacttgctg 661 ctcggcggac gacgcggtca tgtggccgcc ttcgattggg tgaccaagcg gctgcactgc 721 gaattcaatg ccatggagag cgtcgaggat gtccagtggc tgcacgtgcc caccatgtac 781 gcggtggccc agaagagctg ggtgtacatg tacgacaaga agggcaccga gctgcactgc 841 atcaagcggc tgaacagggt gaatcggttg gatttcctgc cctatcactt cctcttggcc 901 gccggcaaca gtgcgggcta cgcctcctgg ctggacgtct ccattggcga gctggtgggt 961 aatttcaaca ccggactcgg tgacatacgc ctgatgcggc acaatcctcg aaatggagtg 1021 ctctgcattg gcggcggacg tggcgtcgtg tccatgtggt cgcccaaagt tcgtgagccg 1081 ctggccaagc tgctctgcca ttcgacggcc atgacggcgc tgacggtgga tcccaagggt 1141 cagcatttgg ttaccgccgg tttggatcgg gcagtaaagg tctgggacat caggatgcta 1201 gtaaacgaca agccgctgac gcatttccaa ctccggctgg ccgccaacga gctggatgtc 1261 tcgcagcgcg gcatgctggc gctctcgcag ggcacttacc tggagaccta cgcggatttg 1321 ctctccggcg gaggttcggg cgacgggacc cgactgccct acatccgcca gcgctgcgat 1381 gccttcgtcc acgggctgcg cttctgtccg tacgaagatg tactgggtgt ggccaccgcc 1441 aagggcttcc aatcgctgct ggttcccggc gccggggagc ccaactttga tgctttggag 1501 gacaacccgt acgagacgtc gaagcagcga cgcgaacacg aagtgcacgc tctgctcgag 1561 aagataccgc ccgagctgat caccctggat ccgcacgaga tcaccggcgt ggatgcgccg 1621 acgctgcagg agaagatcga cgcgaagcgg aggctgttcc acgtgaaggc gccgcgcatc 1681 aacatgaagt cgcgccacaa gatgaaggga cgcggcggca cggcgaaggc ggcgcgcaac 1741 aagcagatcg tcaaggatgg caaacgtagg gaattcattg ccgaggtgcg ggaggccaag 1801 aagagcctga tcaagcagca tgcagtgaaa gaggagggcg ccaagggcaa aaccaaggct 1861 ccgcgctccg tgctcgatcg tttcaagccc aagccgccca agaaacaaaa gacctaatcg 1921 cagttgttcg tcttaagcca gaggaatata atgtatacat taaactattt gtagaagcta