Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017139240 2155 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017139240 VERSION XM_017139240.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139240.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2155 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2155 /gene="Trxr1" /note="Thioredoxin reductase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108055751" CDS 89..1828 /gene="Trxr1" /codon_start=1 /product="thioredoxin reductase 1, mitochondrial isoform X1" /protein_id="XP_016994729.2" /db_xref="GeneID:108055751" /translation="MNLFVRQCSTLLTSGIRQPNNNKCSSINGLACWISSCSSGAMSG QRGSRDSAGSPGAPGVSATGNGSAPPFQHPHCDRAAMYEQPVRKMRTKGGTYDYDLIV IGGGSAGLACAKEAVLNGARVACLDYVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQAS LLGEAVHEAAAYGWNVDDKIKPDWNKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLG SFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEHGITSDDLFSLDREPG KTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVASSMEERGIPFLR KSVPLSVEKQDDGKLLVKYKNTETGEEAEDVFDTVLWAIGRKGLVDDLNLPNAGVSVQ KDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGATQRMDYKDV ATTVFTPLEYACVGLSEEDAVKQYGADEVEVFHGYYKPTEFFIPQKSVRYCYLKAVAE RHGDQRVYGLHYLGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLSITK RSGLDPTPASCCS" misc_feature 374..1822 /gene="Trxr1" /note="thioredoxin and glutathione reductase selenoprotein; Region: TGR; TIGR01438" /db_xref="CDD:273624" polyA_site 2155 /gene="Trxr1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtgtttgtgt tgttcctccg cgaattttgt ttccactcaa gtgttccagc tactagaaat 61 tggaaagtgg ggggctaaga ccgccaagat gaacttgttc gtgcgccagt gctcgacgct 121 tttaacgtct ggcattcgac agccaaacaa caacaagtgc tcctcgataa acgggctcgc 181 ttgttggatt tccagttgtt ccagtggagc gatgtcgggt caaagaggat cgcgcgacag 241 cgctggaagt ccaggggcgc cgggcgtcag tgcaaccggg aacggtagtg cacccccctt 301 ccagcatccg cactgcgacc gggcggccat gtacgagcag ccggtgcgga agatgaggac 361 caaaggagga acctacgact acgacctaat tgtgattggc ggcggatcag ctggcctggc 421 ctgcgccaag gaggcggtgc tcaacggagc ccgcgtggcc tgcctggact acgtcaagcc 481 cacgcccacg ctgggcacca agtggggcgt tggcggcacc tgcgtgaacg tcggctgcat 541 tcccaagaag ctgatgcacc aggcctccct cctcggcgag gctgtccacg aggcagcagc 601 ctatggctgg aacgtggacg acaagatcaa gcccgactgg aacaagctgg tgcagtccgt 661 gcagaaccac atcaaatccg tcaactgggt gacccgcgtg gatctgcgcg acaagaaagt 721 ggagtacatc aatggactcg gctccttcgt ggactcgcac accctgctgg ccaagctgaa 781 gagcggcgag cgcacaatca ccgcccagac ctttgtcatc gccgtgggcg gccgtccccg 841 ctatccggat attcccggag ccgtggagca cggcatcacc agcgatgatc tgttcagttt 901 ggaccgcgag cccggcaaga ccttggttgt gggagctggc tacattggcc tcgagtgcgc 961 tggattcctg aagggtctcg gctacgagcc caccgtcatg gtgcgctcca ttgtgctgcg 1021 cggcttcgac cagcagatgg ccgagctggt ggcctcctcg atggaggagc gcggcattcc 1081 cttcctgcgc aaatcggtgc ccctgtcggt ggagaagcag gacgacggca agctgctggt 1141 caagtacaag aacacggaga ccggcgagga ggccgaggat gtcttcgaca ccgtgctgtg 1201 ggccattggc cgcaagggcc tggtcgacga tctgaatttg cccaatgccg gcgtgagtgt 1261 gcagaaggac aagattccag tggactcgca ggaggccacc aatgtggcga acatctatgc 1321 cgtgggcgac attatctacg gcaagccgga gctgacgccc gtggccgttt tggccggtcg 1381 tctgctggcc cgccgcctct acggcggagc cacgcagcgc atggactaca aggatgtggc 1441 caccacggtg tttacgcctc tggaatacgc ctgcgtcggt ctgagcgagg aggatgccgt 1501 caagcagtac ggagccgacg aggtggaggt attccacggc tactacaagc ccacggagtt 1561 cttcattccg cagaagagcg tgcgctactg ctacttgaag gcggtggccg agcgccacgg 1621 cgaccagcgc gtctacggac tccactacct cggcccggtg gccggtgagg tgatccaggg 1681 attcgcggcc gccctcaagt ccggcctgac catcaacacg ctgatcaaca ccgtgggcat 1741 tcaccccacg accgccgagg agttcacccg gctgagcatc accaagcgct cgggattgga 1801 ccccacgccg gccagctgct gcagctaagg cgggattgca gctcagccgc gaagacccga 1861 agatgatgaa tggttgttag acgcggccca gcgatcgaag agttcaacag ttccgtttca 1921 gtttccacac aattaacaac acccacacaa tagctctgcg caagggaggg gcaccgggca 1981 gcgatgacgg gcggaactcc agcggagcga ccagtcccct ggctgcgacc agcccatccc 2041 acgactgctg cgccgccgac atgcactcaa aattttgaat ttgtttgaac ctatgaaatt 2101 aaccatgaaa ccccctaaat gtatggttga aaaatataat ttttcaccga caaaa