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LOCUS XM_017139210 4897 bp mRNA linear INV 09-DEC-2024 X7, mRNA. ACCESSION XM_017139210 VERSION XM_017139210.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139210.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4897 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4897 /gene="sdt" /note="stardust; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108055739" CDS 136..4230 /gene="sdt" /codon_start=1 /product="uncharacterized protein sdt isoform X6" /protein_id="XP_016994699.2" /db_xref="GeneID:108055739" /translation="MRILKQWNRRRSGSSIVVLDGDDLKPCLPDDYISGQHHLNHQQQ LQLQQQLQQQHPLQQQHYRTHSGDIREIDQEMLTMLSVNQDNGPHREMAVDCPDTFIA RNKTPPRYPPPRPPQKHKKSTTNNTTTTTTITAMTNNDHANKMLIVAYHSSHQHEQLQ QQPPPPHHEKQQQHPSKTTNIALDVATQNLYNQKQQNKLEQIENYENCLQSEQPNEQL EQKQKQQQLQVATATTVGATTTATQVAQQQTPSHKLQATLSSDPNGNSNSNSNANGTS SSSNNSSITDDFLCVVDGLYQRKDSASPSSSAFDEVMSKHTLDSFGSIAYRHLHQQHQ ATSNGNSSNSNGNTSSNTADSNKTNTVAGVTSSSSNSNSLNSSNSSMHTSNSNSSNSS SSGHSSNIASATSTSSSTVPDDLSLAPPGYEVSQQQHHVAPVTVLLPPMAKHRELPVD VPDSFIEMVKTPPRYPPPAHLSSRGSLLSNGSASTAHTTLSSMGVSPSPAAAATATAP ATAAATATSACATASVAAAVSGVADGDARRVADELNGNAKPVPPPRDHLRVEKDGRLV NCSPAPQLPDRRAPGNASSGSSGGLAHPLQQQQIAQIVEPTLEQLDSIKKYQEQLRRR REEEERIAQQNEFLRNSLRGSRKLKALQDTATPPGKAVAQQQQQQQATQATQVVGVEN EAYLPDDDQPTQVEQIDGYGELIAALTRLQSQLSKSGLSTLAGRVSAAHSVLAGASVA HVLAARTAVLQRRRSRHSGPLHHSALGLQKDIVELLTQSNTAAAIELGNLLTSHEMEG LLLAHDRIANHTDGTPSPTPTPTPAIPGGGLGLISGHSSPVAGPKRNLGMVVPPPVVP PPLAQRGAMPLPRGESPPPPQLPMPMSNLPMSACFGTLNDQNDNIRIIQIEKSTEPLG ATVRNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQG TLTFLIVPAGSPPIHGGVMGGGGGVVAGQTLAGLGGAHRDTAVLHVRAHFDYDPEDDL YIPCRELGISFQKGDVLHVISREDPNWWQAYREGEEDQTLAGLIPSQSFQHQRETMKL AIAEEAGLARSRGKDGSGSKGATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEE ILTYEEVALYYPRATHKRPIVLIGPPNIGRHELRQRLMADSERFSAAVPHTSRARREG EVPGVDYHFITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHP QSLKLLRASDLKPYVVLVAPPSLDKLRQKKLRNGEPFKEEELKDIIATARDMEARWGH LFDMIIINNDTERAYHQLLAEINSLEREPQWVPAQWVHNNRDES" misc_feature 2839..3075 /gene="sdt" /note="PDZ domain of membrane palmitoylated protein 5 (MPP5), Drosophila Stardust, and related domains; Region: PDZ_MPP5-like; cd06798" /db_xref="CDD:467259" misc_feature order(2869..2889,2914..2916,2923..2925,3013..3015, 3025..3027,3034..3039) /gene="sdt" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467259" misc_feature 3184..3369 /gene="sdt" /note="Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5); Region: SH3_MPP5; cd12036" /db_xref="CDD:212969" misc_feature order(3190..3192,3262..3267) /gene="sdt" /note="GuK domain interface [polypeptide binding]; other site" /db_xref="CDD:212969" misc_feature order(3199..3201,3205..3207,3214..3216,3247..3249, 3301..3306,3358..3360,3364..3369) /gene="sdt" /note="peptide ligand binding site [polypeptide binding]; other site" /db_xref="CDD:212969" misc_feature order(3643..3645,3661..3663,3703..3705,3730..3732, 3739..3741,3766..3768,3835..3837,3850..3852) /gene="sdt" /note="catalytic site [active]" /db_xref="CDD:238026" misc_feature order(3643..3645,3661..3663) /gene="sdt" /note="G-X2-G-X-G-K; other site" /db_xref="CDD:238026" misc_feature 3658..4173 /gene="sdt" /note="Guanylate kinase homologues; Region: GuKc; smart00072" /db_xref="CDD:214504" polyA_site 4897 /gene="sdt" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcggcagaaa tgtaaaagcc aaaaggataa accaacaaaa aggcaaaatt aaaaaaaaaa 61 agttattaaa gaaagtgtca gaaagaaagg gaacgacaca acaaaaaaga gacagagatc 121 gaacggatta cagatatgcg catcctaaag caatggaatc gccggcgctc cggatcgagc 181 attgttgtgc tggacggcga cgatttgaag ccatgtctgc cggatgacta cataagcggc 241 cagcaccacc tgaaccacca gcagcagctg caactgcagc agcagctaca gcagcaacat 301 ccgctccagc agcaacacta tcgcacgcac tcgggcgaca tcagggagat tgaccaggaa 361 atgctgacca tgctgtccgt gaaccaagat aacggtccac accgtgagat ggccgtcgat 421 tgtccggaca cgttcatcgc acgcaacaag acgccaccca gatatccgcc accccgtcca 481 ccgcagaaac acaagaaaag caccaccaac aacaccacca ccaccactac aatcacagct 541 atgactaaca atgatcatgc taacaaaatg ttaattgttg catatcattc ttcacatcaa 601 catgaacaac tacaacaaca accaccacca ccacatcatg aaaaacaaca acaacaccca 661 tcaaaaacaa caaatattgc actcgatgtg gccacacaaa atctgtacaa tcaaaaacaa 721 caaaacaaat tggaacaaat tgaaaactat gaaaattgcc tacaatcgga acaaccaaac 781 gaacaactcg agcagaagca gaagcagcaa caattgcaag tagcaacagc aacaacagta 841 ggagcaacaa caactgcaac acaggtggcc caacaacaga cgcccagcca caagttgcag 901 gcaacactga gcagcgatcc aaatggcaac agcaacagca acagcaatgc caacggaacc 961 agcagcagca gcaacaacag cagcatcacc gacgacttcc tctgcgttgt cgatggtctc 1021 tatcagcgca aggactccgc ctcgccctcg tcgagcgcct tcgatgaggt gatgagcaag 1081 cataccctcg actccttcgg cagcatcgcc taccgtcacc tgcaccagca acatcaggcg 1141 acgagcaacg gcaacagcag caacagtaat gggaatacca gcagcaacac agctgattcg 1201 aataaaacca atacggtagc gggagtgacg agcagcagca gcaacagcaa ctcgctgaac 1261 agcagcaaca gctcgatgca caccagcaac agcaatagca gcaacagcag cagcagcgga 1321 cacagcagca acattgccag tgccacttcg accagcagct caacggtgcc cgatgatctg 1381 agcctggcgc cacctggcta cgaggtgagc cagcagcaac atcatgttgc tcccgtgacg 1441 gtgttgctgc ccccgatggc caagcatcgc gagttgcccg tggatgtgcc agacagcttt 1501 atcgagatgg tcaagacgcc gccaagatat ccgccacctg ctcacctttc ttctcgcgga 1561 tcgcttttat cgaacggcag cgcctccacc gcccacacga cgctctcctc gatgggcgtg 1621 tcgccttcgc cagcagcagc agcaactgca acagcaccag caacagcagc agcaacagca 1681 acatcggcat gtgcaaccgc aagtgttgct gctgcggttt ctggtgttgc tgacggcgat 1741 gcgaggcggg tggccgatga gctcaatggg aatgcgaagc ccgtaccgcc gccacgtgat 1801 catttgcggg tggagaagga cgggcgtctg gtcaactgct cccccgcccc ccaacttccg 1861 gatcgccggg cgccgggaaa tgcgagcagc ggcagcagcg gcggcttagc acatccgctg 1921 cagcaacagc agatcgcaca gatcgtggag cccactttgg agcagctgga cagcatcaag 1981 aaataccagg agcaactgcg ccgacgacgc gaggaggagg agcgcatagc gcagcagaat 2041 gagttcctgc ggaacagtct gcgtggctcc cggaagctga aggctctcca ggacacggcc 2101 acgccccccg gcaaggcggt ggcccaacag cagcagcagc agcaggcaac gcaggccacc 2161 caggtggtgg gcgtggagaa tgaggcctat ctgcccgacg acgaccagcc gacgcaggtg 2221 gagcagatcg atggctatgg cgagctgata gccgccctca cgcgcctgca gagccagctg 2281 agcaagagcg gactgagcac cctggcgggt cgcgtttcgg ccgcccacag tgtgctggcc 2341 ggcgccagtg tggcccatgt cctggccgcc cgcacagccg tcctgcagcg acggcgttcc 2401 cgccactccg gtcccctgca ccacagcgcc ctcggtctgc agaaggacat tgtggagctg 2461 ctgacccagt cgaatacggc ggcggccatc gagctgggca acctgctgac cagccacgaa 2521 atggagggtc tgctgctggc ccacgatcgc atagccaatc acacggacgg cacaccatcg 2581 cccacgccca cgcccacgcc ggcgatccct ggaggaggat taggattgat cagtggtcac 2641 agcagtccgg tggcgggacc caaaaggaac ctgggaatgg tggtgccgcc gcccgtcgtt 2701 ccaccgccgc tggcgcaacg cggagcaatg ccactgccac gcggggagtc gccaccgcct 2761 ccgcaactgc ccatgcccat gtccaatctg ccgatgagcg cgtgtttcgg cacgctgaac 2821 gatcagaacg acaacatacg gatcatacag atcgagaagt cgacggagcc gctgggcgcc 2881 accgttcgca acgagggcga ggcggtggtc atcgggcgga ttgtgcgcgg cggggcggcc 2941 gagaagtcgg gactgctgca cgagggcgac gagatcctgg aggtgaatgg ccaggaactc 3001 aggggcaaga cggtgaacga ggtgtgcgcg ctgttgggag ccatgcaggg caccctgacc 3061 ttcttgattg tgcccgccgg cagtccgccc atccatggag gagtgatggg cggcggagga 3121 ggagtcgtcg cgggacaaac gctcgccgga ttgggcggag ctcatcgcga taccgccgtg 3181 ctgcatgtgc gggcgcactt cgactacgat cccgaggacg atctgtatat tccgtgccgg 3241 gagctgggca tcagcttcca gaagggcgat gtgctgcacg tgatcagccg cgaggatccc 3301 aactggtggc aggcgtaccg cgagggcgag gaggaccaga cgctggccgg tctcattcct 3361 agtcagtcgt tccagcatca gcgcgagacg atgaagctgg ccattgccga ggaggcggga 3421 ctggcgcgat cgcggggcaa ggacggttcg ggcagcaagg gggccacgct cctctgtgcg 3481 cgcaagggtc gcaagaagaa gaagaaggcc agctccgagg cggggtatcc cctttacgcc 3541 accacggcgc ccgatgaaac ggatcccgag gagatactca cctacgagga ggtggccctc 3601 tactatccgc gcgccaccca caagcggccc atcgtcctca tcggcccgcc caacattggc 3661 agacacgagc tgcgccaacg cctgatggcc gactcggagc gattctctgc cgcagtgcca 3721 cacacgtcac gagcccgcag agagggcgaa gtgcccggcg tggattacca ctttatcacg 3781 cgccaggcct tcgaggcgga tattttggcg cgtcgctttg tggagcacgg tgaatacgag 3841 aaggcctact acggcacatc actggaggcc atacgcacgg tggtggccag cggcaagatc 3901 tgtgtgctca acctgcatcc gcagagcctc aagctgctgc gcgcctccga cctcaagccg 3961 tatgtggtgc tggtggcgcc gcccagtctg gacaagctgc gtcagaagaa gctgcgcaac 4021 ggcgaaccct tcaaggagga agagctcaaa gacatcattg ccacggccag ggatatggag 4081 gcccgttggg gtcacctatt cgacatgatc atcatcaaca acgacacgga gcgcgcctat 4141 caccagctgc tggccgagat caactcgctg gaacgggagc cgcagtgggt gcccgcccag 4201 tgggtgcaca acaatcgcga cgagtcataa tggggtcgcc agaaccccaa cccacccaat 4261 taccaccacc caatccagaa ataggaaccc aaaacaactc tttgtaaata caattttcaa 4321 ttgagccatg aagcggagtg caggatcgat tccagtccag tagttcggtt tgcctgccga 4381 tgcgattaac aacgccccct accacaaccc ctccaatatt atatatacac atatatatat 4441 atatatattt atatactatt cgttgcgtat gtgcatttta gtcttagcga aaataattgt 4501 ttttaatcgt gtgtgtcgcc ctgttttgaa agcattccca taatacaaaa cccctttatg 4561 tatgttcaca aaatttgttg ttcgctgaac cattttgcgg ggctgccaca gagaaatcga 4621 gtagctgaag agcctgctaa attgtatatt atgatttttc catcgtttgt gatttctgtg 4681 gcattgccgt tttgtacacc tatattatac ccattttttt tttgtacgac taccactaac 4741 ttatattgta aacgtatttt tttgtttaaa ctaagcttga gcacttcctt aatttcaagg 4801 ggcaaattga aattgtaaaa taacgaatca gcgctgggag gaaggccaga atcgatatga 4861 catagtaccc tagaacccaa taaaatgtgt aataata