PREDICTED: Drosophila takahashii Phospholipase A2 group III

LOCUS       XM_017139190            1146 bp    mRNA    linear   INV 09-DEC-2024
            (GIIIspla2), mRNA.
ACCESSION   XM_017139190
VERSION     XM_017139190.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017139190.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1146
                     /gene="GIIIspla2"
                     /note="Phospholipase A2 group III; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108055733"
     CDS             81..716
                     /gene="GIIIspla2"
                     /codon_start=1
                     /product="acidic phospholipase A2 PA4"
                     /protein_id="XP_016994679.2"
                     /db_xref="GeneID:108055733"
                     /translation="MWIPNESSGSTICVLMPLAILATWQLCAVPGTDAKHLAARSHDP
                     ETEAPSQIHAHSHPTGDAAAAVRRRERRQLSDWLIAPNTRWCGRGNLANGTYNDLGGA
                     SKADKCCRKHDHCKMWIDGMSNRYDLFNYRPYTLSHCSCDLRFRTCLKMAGDEDANAI
                     GKLFFNVVQTQCFGLKAETVCVQRGGSGKESDPCLKEETRQKAFLRNNKRF"
     misc_feature    312..605
                     /gene="GIIIspla2"
                     /note="A sub-family of Phospholipase A2, similar to bee
                     venom PLA2. PLA2 is a super-family of secretory and
                     cytosolic enzymes; the latter are either Ca dependent or
                     Ca independent. Enzymatically active PLA2 cleaves the sn-2
                     position of the glycerol backbone of...; Region:
                     PLA2_bee_venom_like; cd04704"
                     /db_xref="CDD:153093"
     misc_feature    order(333..335,339..341,345..347,417..419)
                     /gene="GIIIspla2"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:153093"
     misc_feature    order(414..416,504..506,570..572)
                     /gene="GIIIspla2"
                     /note="catalytic site [active]"
                     /db_xref="CDD:153093"
     polyA_site      1146
                     /gene="GIIIspla2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ggttttcagc ttggagagca atcagtcacc gaacaccggg cgctaaaaga tagactccta
       61 cactgctaca ccccaacacg atgtggatcc cgaacgaaag cagcggcagc actatctgcg
      121 ttctgatgcc tctggcgatt ttggcgacct ggcagctgtg cgcggttccc gggacggatg
      181 ccaagcactt ggccgccaga tcgcacgacc ccgaaacgga agccccatcc cagatccacg
      241 cacatagtca cccaactggc gacgctgcgg ctgcagtgcg tcgtcgcgag cggcggcagc
      301 tctccgattg gctaatcgcc cccaacacgc ggtggtgcgg acgcggcaac ctggccaacg
      361 gcacctacaa cgacctgggc ggcgcctcca aggcggacaa gtgctgccgg aagcacgacc
      421 actgcaagat gtggatcgac gggatgtcga atcgctacga cctcttcaac taccgcccct
      481 acacgctgtc ccactgcagc tgtgacctcc gtttccgcac ctgcctgaag atggccggcg
      541 acgaggatgc gaacgccatc ggcaagctct tcttcaatgt cgtccagacg cagtgcttcg
      601 gcctcaaggc ggagaccgtc tgcgtccagc gcggcggctc cggcaaggag tccgatccct
      661 gcctcaagga ggagacgcgc caaaaggcct tcctgcgcaa caacaagcgg ttctaagagt
      721 cccagttggc acataacaag cggcaggatt ggagtatccc aaagtcgcct gcccgtataa
      781 gaagcgaaca aaccgcccca gagtgctgca attgagtttg aaactcgatg ggagagcatg
      841 gcaaaacacc atcgtcatcc gtacttagag gagagatagc aagagacacc cgtctatgta
      901 ttaagctata taccaacata tgtatatgac tcgcaagtgc tattataatg cgtagtagtc
      961 gatacgatat actatatata ctatatacta gttgtagtca atcaatctag tttaggccca
     1021 cggatcaaat ataggctgcc agaaaaccaa gtttttaact agctgtagac cccgtagata
     1081 ccctatataa ttagttgtag taagaccagt agtaagttaa taaacaagtg taaaaaaccc
     1141 taaaaa