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LOCUS XM_017138888 1968 bp mRNA linear INV 09-DEC-2024 [acetyl-transferring]-phosphatase 1-like protein, mitochondrial (Pdp), mRNA. ACCESSION XM_017138888 VERSION XM_017138888.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138888.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1968 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1968 /gene="Pdp" /note="pyruvate dehydrogenase [acetyl-transferring]-phosphatase 1-like protein, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055520" CDS 381..1817 /gene="Pdp" /codon_start=1 /product="pyruvate dehydrogenase [acetyl-transferring]-phosphatase 1, mitochondrial" /protein_id="XP_016994377.2" /db_xref="GeneID:108055520" /translation="MFKFVLNDAANYVRSNVREFSLNALRLLPQLPQLSPYDVNLVLR ENEFVYNFPVEGIIRSYETNQLGSNSPCEDSRTEASLLHRNGFICGIFDGHAGAACGQ VVSKRLLRYVSAATLPRQVLREQMKQGCSSQSFLKCHNDNVDFVSEIKPLYEASFVKY IKQLAETPQRDVSSELVNAFLHLDENLSEEALASSDVRTMSVALSGAVACLVHIEGLQ LHVASTGDCGAVLGVLDPQTQQWQPKKLNSEHNADNMSEVRRILAEHPKEEQETVIRN GRLLSQLAPLRAFGDFRYKWSLDIMQQKVLPMFGEHSMAPNYYTPPYLTARPDVQRHE LGPGDKFLVIASDGLWDFLSPSEVVSLVGEHINSKKILEPMRLPEGDITLQQISEQLA ERKAGLTRKPVDQNAATHLIRHALGATDYGIEHSKISYYLTLPKDVVRLYRDDITITV IYFNSEHIAQLQGEADADADPGVTAPVA" misc_feature 552..1739 /gene="Pdp" /note="Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence...; Region: PP2Cc; cd00143" /db_xref="CDD:238083" misc_feature order(585..587,597..602,657..665,1419..1421,1710..1712) /gene="Pdp" /note="active site" /db_xref="CDD:238083" polyA_site 1968 /gene="Pdp" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtcattctc gtgtccgtgc tttttcgtgc cgcaaaaaaa aaccatcgct agtacgcact 61 gtattttcat tttacgtttg ttttccgtgg aaattgtccg tttcgtttct cgcacagcac 121 acaaatgtac caacaatccg ccggccactc ggaaaacaag agcttctttt tgtcagcagc 181 cggcagccgg agtccgtaga tcagccggat tctccggatt ctcgggatac ggaatccacc 241 tcgttctccg tctccgtctt ctcttcctct atctcttcct ccttctccgc ctcctcctcc 301 gccgattcgg ttacggaacc aatattatta ccgttaatta tagccacagc ggggcgagag 361 catatagaat cgccatatag atgttcaagt tcgtgctgaa cgacgccgcc aactacgtgc 421 gatccaatgt gcgggagttc agcctgaatg cactgcgtct gctgccgcaa ctgccgcagt 481 tgagtccata cgatgttaac ctagttctaa gggagaacga gttcgtctac aacttcccag 541 tggaggggat catccgcagc tatgagacga accagctggg ctccaactcg ccctgcgagg 601 actcgcgcac ggaggccagc ctgctgcacc gcaacggctt catctgcggc atcttcgacg 661 gccatgcggg ggccgcctgc ggccaggtgg tgtccaagcg gctgctccgc tacgtctcgg 721 cggccaccct gccgcgccag gtgctccgcg agcagatgaa gcagggctgc agcagccagt 781 cgttcctcaa gtgccacaac gacaacgtgg acttcgtcag cgagatcaag ccgctctacg 841 aggccagctt cgtcaagtat atcaagcagc tggcggagac gccgcagcgg gacgtgtcca 901 gcgagctggt gaacgccttc ctccacctgg acgagaatct ctccgaggag gccttggcca 961 gcagcgatgt gcgcaccatg agcgtagcgc tctccggagc cgtcgcctgt ctggtgcaca 1021 tcgagggcct ccagctgcac gtggccagca cgggtgactg cggcgccgtg cttggcgtcc 1081 tcgatccgca gacgcagcag tggcagccga agaagctgaa cagcgagcac aacgcggaca 1141 acatgtccga ggtgcggcgc atcctggccg agcacccgaa ggaggagcag gagacggtga 1201 tccgaaatgg gaggctgctc agccagctgg cgccgctgcg tgccttcggg gacttccgct 1261 acaagtggtc cctggacatc atgcagcaga aggtgctgcc gatgttcggc gagcactcga 1321 tggcccccaa ttactacacg ccgccgtacc tgaccgcccg ccccgatgtc cagcggcacg 1381 aactggggcc cggcgacaag tttctagtca tcgccagcga cggcctgtgg gacttcctct 1441 cgcccagcga ggtggtcagc ctggtcgggg agcacatcaa ctcgaagaag atcctcgagc 1501 cgatgcgcct gccggagggc gacataacgc tgcagcagat ctccgagcag ctggccgaac 1561 ggaaagctgg cctcacacgg aagcccgtgg atcaaaacgc ggccacgcat ctcatccggc 1621 atgccttggg cgccaccgac tatgggattg agcactccaa gatctcgtac tatctgacgc 1681 tgcccaagga tgtggtgcgg ctgtatcgcg acgacatcac catcaccgtc atctacttca 1741 actcggagca cattgcccag ctgcagggcg aggcggatgc ggatgcagat ccgggggtca 1801 ctgcgccggt agcgtgatct ccgtgtatat ttaaccagcc agcgagccac taaccttcag 1861 cctaactagc ctaagtgttg cgtttaagtt tgtttcattc gccaacggac ctcggacaac 1921 tgccgcgcca aataaatcca aatcgcacgc ggaaagcgaa attatcta