Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017138886 2388 bp mRNA linear INV 09-DEC-2024 (Tom40), transcript variant X1, mRNA. ACCESSION XM_017138886 VERSION XM_017138886.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138886.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2388 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2388 /gene="Tom40" /note="Translocase of outer membrane 40; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108055518" CDS 412..1446 /gene="Tom40" /codon_start=1 /product="mitochondrial import receptor subunit TOM40 homolog 1" /protein_id="XP_016994375.1" /db_xref="GeneID:108055518" /translation="MGNVLAASSGAPGSGASNLGLGLPEPATLPSESGSPSGSSSSAG GADSFAAAKDAPLENPGTVEELHKKCKDIQAITFEGAKIMLNKGLSNHFQVSHTINMS NVVPSGYRFGATYVGTKQYSPTEAFPVLLGDIDPSGNLNANVIHQFSARLRCKFASQI QDSKMVASQLTTDYRGSDYTASLTVANPSIFTNSGVVVGQYLQSVTPALALGAELAYQ FGPNVPGRQIAIVSAVGRYTAGNSVWSGTLGQSGLHVCYYQKASDQLQIGVEVETSLR MQESVATLAYQIDLPKADLVFRGGIDSNWHISGVLEKRLTPLPFTLALSGRMNHVKNN FRLGCGLMIG" misc_feature 580..1443 /gene="Tom40" /note="Translocase of outer mitochondrial membrane 40 (Tom40); Region: Porin3_Tom40; cd07305" /db_xref="CDD:132766" polyA_site 2388 /gene="Tom40" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgttgtaat tcgttcggag ccgtgcaaat agagctattt ttaaaatttc gaataaatac 61 tcgttttaaa aaacgcggca gtctggcaac tcgcggtgcg ccgcacattt ctggcctata 121 tttttctaca aattcctatc tttttgattt ttttctgcat cacatttgat taaaggcaac 181 ccagaagtct tgaaatacat gccaaaaaac ttagaagtgg cgattacttt tatttttcta 241 caccttcgta gtcgtgctct aataattttt taaattccga taaatattta aagtcgcgaa 301 cgtctggcaa ccgcgcaaac aaccacaaac catctggtcg agacaagaca taacaccgat 361 atagaaacgt gttggctttg aaattacata gattacatcg ggactttcga aatgggcaac 421 gtgctagcgg cttcctccgg cgccccaggc agtggcgcct ccaatctggg cctcggcctc 481 ccggagccgg ccaccctgcc ctccgaatcc ggctccccat cgggctcctc ctcgtccgcc 541 ggaggcgctg attcctttgc cgccgccaag gatgcgccgc tcgagaatcc cggcaccgtc 601 gaggagctgc acaagaagtg caaagacata caggccatca ccttcgaggg cgccaagatc 661 atgctgaaca aggggctaag caaccacttc caggtgtcgc acaccatcaa catgagcaat 721 gtggtgccca gtggctaccg cttcggggcc acctacgtgg gcaccaagca gtacagcccc 781 acggaggcct tccccgtcct cctgggcgac atcgacccct cgggcaacct caacgccaac 841 gttatccacc agttctccgc ccgtctgcgc tgcaagttcg cctcgcagat ccaggactcc 901 aagatggtcg cctcgcagct gacgaccgac tatcgcggca gcgactacac cgcctcgctg 961 acggtggcca atccgagcat attcaccaac tccggcgtgg tcgttggcca gtatctgcag 1021 tcagtcactc cagccctcgc cctgggcgcc gagctggcct accagttcgg cccgaacgtc 1081 cccggccgcc agatagccat tgtgtccgcc gtgggccgct atacagcggg caactcggtg 1141 tggtcgggga ccctgggcca gagcggcctg cacgtgtgct actaccagaa ggccagcgac 1201 cagctgcaga tcggtgtcga ggtggagacc agcctgcgca tgcaggagtc cgtggccacg 1261 ctggcctacc agatcgatct gcccaaggcg gatctggtgt tcagaggcgg aatcgattcc 1321 aattggcaca tctccggagt tttggagaag cgccttaccc cattgccatt tacgctagcc 1381 ctaagcggac gcatgaacca cgtcaagaac aactttagac tcggctgcgg gctgatgatc 1441 ggctaggccg gacctttgcg cagccaaacc ctacttcagc ctcagacccc aagcacacac 1501 actcatccat tgtaactttt tcacatcatc cgctaacaac aagaagaaca acaacaacaa 1561 acaaagagat atatataaat ctgctaacga acgtttgcgt ttacgttttt tatgatgatc 1621 tgtcgtttgt cgtgtgtata gaaagtatgc cttgcatccc gaaaaaggcg gcctgcgggg 1681 atctggaatc ctatggaatg gcttttattc tttgatccat tatgttacca gttaccagtg 1741 tgccactgtt cgtcgtccgt tgttaatcgc ccaattttcc ccactgacag agtcataaac 1801 gcggagttga aaatactaaa gagaaaaata ttccacaatt attataaatt tcttcactca 1861 acacaaaata cacacacaca cacatccaaa actacaacaa gaaactgtca ctgtacattt 1921 taagttgctt cctaaacgta cgcatttatt tagaacaacc agctatttcc tcaaaacaag 1981 ctaaaacatt aaataaatga aaaaccaaca agcagagaca acaagtaata aatgcgtatg 2041 aaatgtatgt tacaagctat caaattggta acaaactgct ttaagtttat aatttataaa 2101 tttacaatta gttctaataa caaaaacttt gttaaaccaa cgtttattac ctttatggcg 2161 tgcaagaatt aggcagaatt caatgagaga cggcgccgaa atgttgtgag gggaagtaaa 2221 accaaacaaa tcaaactcct aaaaaattaa aaacccaaac aatatgttaa acatgtgaaa 2281 taattaactt actttgtaat ttacccgttc ccaaacaaga accataaaaa caacaaagaa 2341 aaccagatga taaaataggt tttagaaaaa ataaacaatt taaagaaa