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LOCUS XM_017138882 3466 bp mRNA linear INV 09-DEC-2024 protein (Hira), mRNA. ACCESSION XM_017138882 VERSION XM_017138882.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138882.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3466 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3466 /gene="Hira" /note="histone cell cycle regulator-like protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108055515" CDS 105..3128 /gene="Hira" /codon_start=1 /product="protein HIRA homolog" /protein_id="XP_016994371.2" /db_xref="GeneID:108055515" /translation="MRLLKPAWVHHDDKQIFSVDIHQDCTKFATGGQGSDCGRVVIWN LLPVLSDKAECDAEVPKMLCQMDQHLACVNCVRWSQNGQNLASGSDDKLIMIWRKSAG SSGVFGSGGMQKNHESWKCFHTLRGHDGDVLDLAWSPNDIYLASCSIDNTVIIWDAQA FPHSVATLKGHTGLVKGVSWDPLGRFLASQSDDRSIKIWSTLDWNLSHTITEPFEECG GTTHILRLSWSPDGQYLVSAHAMNGGGPTAQIIEREGWKCDKDFVGHRKAVTCVRFHN SILRRQDNDGSPSKPLQYCCLAVGSRDRSLSVWMTALQRPMIVIHELFNDSILDLSWG PQECLLMACSGDGSIACLKFSEEELGKAISEEEKNAIIRKMYGQSYVNGLGKNTSLAE HPKPAKFPLGNQQPISKQTETRTKDGKRRITPMFIPLHEDGPISLNSQIVSSSSGPAI TAAVSCVSPPAEGGAATPLMPLEPLVSKADLGRLDSRLKTSQPASQRRQSLPFDPGQT SELPRSPRLEEHQSSTSGPSNLNVTATGKSEFVKAALDYRVHVSNGHLKTNLGMLAKV TASDSKEMLWEFYVGSPIVNLNLCGKYAMLCSLDGSMRLISMETGCPVFPAISLTSSA VHCAFSPDNSLVGVLTECGLLRIWDIARKVISLAAGCLELLNKHGTAVQFSVTDQGMP LIGFPSGNSYSYSTSLQSWLVLATKDAIMYHGIRGTLPRDMDQMQQKFPLLSMQASSQ NYFCFTGGMELRHSESWQQSAKIRFIENQIKLCEALQSLDELQHWHKMLTFQLATHGS EKRMRVFLDDLLSTPEPEISQFVLKLELMQCVLDTLKPHSEWQRLYNEYVELLKECKS ERQKDIFATPAPPQPKAASSAGSSPAGGPSPDEEAPEKAAAEAVTTGSSTATTTTSAS SSISSSSGSSSSSTSSSSSSLSVPLPAPSLSSEIQAIDLLDDELLSASSSPPPLDVSP VEASPASTASAGAASTSPAAPPVCSSKAAETAEQT" misc_feature <108..1151 /gene="Hira" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 150..308 /gene="Hira" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 324..485 /gene="Hira" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 498..611 /gene="Hira" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 630..737 /gene="Hira" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 771..893 /gene="Hira" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 927..1067 /gene="Hira" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1086..1154 /gene="Hira" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1332..1388 /gene="Hira" /note="HIRA B motif; Region: HIRA_B; pfam09453" /db_xref="CDD:462802" misc_feature 1935..2531 /gene="Hira" /note="TUP1-like enhancer of split; Region: Hira; pfam07569" /db_xref="CDD:462211" polyA_site 3466 /gene="Hira" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cttgccatcc ctgatgcggc agtctgttgt tgcgaccaaa actaaacttg aactaaactt 61 gattgatatt tacttttaag atagcagcac taactagact gtaaatgcgg ctcctcaagc 121 cggcgtgggt gcatcacgat gacaagcaga tattctcggt ggacatccac caggattgca 181 ccaagttcgc caccggcggc cagggcagcg actgcggtcg cgtggtcatc tggaacctgc 241 tgccggtgct ctccgacaag gcggaatgcg atgcggaggt gcccaagatg ctctgccaga 301 tggatcagca tctggcctgc gtcaactgcg tccgctggtc gcagaatggc cagaatctgg 361 cctccggctc cgacgacaag ctcatcatga tctggcgcaa gagtgccggt tccagtgggg 421 ttttcggttc aggcggcatg caaaagaacc acgagtcctg gaaatgcttt cacacgctgc 481 gcggtcatga tggtgatgtt ctggacctgg cctggtcccc caatgacatt tacctggcca 541 gctgcagcat tgacaacacg gtgatcatct gggatgccca ggcctttccc cattccgtcg 601 ccacactcaa aggacacact ggattggtga agggcgtctc gtgggatccg ctgggccgct 661 tcctggcctc gcagtccgac gacaggagca tcaagatctg gagcaccctc gactggaacc 721 tctcgcacac gattaccgag cccttcgagg agtgcggcgg cactacgcac attctgcggc 781 tctcctggtc gcccgatggc cagtatttgg tctccgccca tgccatgaat ggcggcggac 841 ccaccgccca gatcatcgaa cgcgagggct ggaagtgcga caaggatttc gtgggccacc 901 gcaaggcggt gacttgtgtg aggttccata actccattct ccggcggcag gacaacgatg 961 gcagtcccag caagccgctg cagtactgct gtttggctgt gggctctcgc gatcgctcgc 1021 tctccgtctg gatgaccgcc ctgcagcgtc ccatgatcgt tatccacgag ctcttcaacg 1081 acagcatcct cgatttgtcc tggggcccac aggaatgcct gctgatggcc tgcagcggcg 1141 acggcagcat tgcctgcttg aaattcagcg aggaggagct gggcaaggcc atttccgagg 1201 aggagaagaa cgccatcata cgcaaaatgt acggccagag ctatgtgaat ggtctgggca 1261 agaacacatc gctggcggag cacccgaagc cagcgaaatt cccgctgggc aaccagcaac 1321 cgataagcaa gcaaacggag acgcggacca aggatggcaa gcgacggatc acgcccatgt 1381 ttataccgct tcacgaagat ggtcccatat cgctgaactc gcagattgtg tccagcagca 1441 gcggaccggc gattacagcg gccgtctctt gtgtctcgcc tcccgcggag ggcggcgcgg 1501 ccacgcccct aatgccgctg gagccgctgg tcagcaaggc ggatctgggc cgcctcgatt 1561 cgcgactgaa gaccagccaa cccgccagcc agcgccgcca gtcgctgccc tttgatcccg 1621 gccaaaccag cgaactgccg cgatctccgc gtttggagga gcaccagagc agcaccagtg 1681 gacccagcaa tctcaatgtc acggccaccg ggaagagtga gtttgtaaag gccgctctgg 1741 actatcgtgt gcatgtctca aatgggcatt tgaagacgaa tcttggcatg ctcgcgaagg 1801 taaccgcctc ggactccaag gagatgctgt gggagttcta tgtgggctcg ccgatagtca 1861 atctgaatct gtgcggaaag tacgccatgc tgtgctccct ggacgggagc atgcgcctca 1921 tttccatgga gacgggctgc ccggtctttc cggccatctc gctgaccagc tcggcagtgc 1981 attgcgcttt tagtcccgac aacagtttgg tgggcgtgct gaccgaatgc ggactgctgc 2041 gaatatggga cattgccagg aaggtcatca gtttggccgc cggctgtttg gagctgctga 2101 acaagcatgg caccgccgtt cagttctcgg tgaccgatca gggaatgccc ctgattggct 2161 tccccagcgg caactcgtac tcctactcga cgagcctgca atcctggctg gtgctggcca 2221 ccaaggatgc gatcatgtac cacggcatcc ggggaacttt gcccagggat atggaccaaa 2281 tgcaacagaa gtttccgctg ctcagcatgc aggcgagcag tcagaattac ttttgcttca 2341 ctggaggcat ggagctgcgg cactcggaga gctggcagca gagtgccaaa atccgtttca 2401 tcgagaacca aatcaagttg tgcgaggctc tgcagtcgct ggatgaactg cagcactggc 2461 acaagatgct cacctttcag ttggccactc atggctctga gaaaaggatg cgtgtgttcc 2521 tggacgatct gctgagcact ccggagcccg aaatttcaca gttcgtgctc aaattggagt 2581 tgatgcagtg cgttctggac accctgaagc cgcattccga gtggcagcgc ctgtacaacg 2641 agtatgtgga gctgctcaag gagtgcaagt cggagcggca gaaggatatc tttgccacac 2701 ccgcgccacc gcaaccaaag gctgcctcct cagcgggctc ttcgccggcg ggcggaccat 2761 ctccggatga ggaggccccg gaaaaggcag ccgcagaagc tgtgaccaca ggcagcagca 2821 ctgcaacaac caccacctcc gccagtagct ccatttcctc ctcctccggc tcgtcctcat 2881 cctcaacctc ctcctcgtca tcgtcgctct cggtgccact gcctgctcct agtctctcct 2941 cagagatcca agccatcgac ttgctggacg acgagctgct gtcggcctca tcttcaccac 3001 ctccgttgga tgtctcgccc gtggaagctt cgccagcgtc cacagcatcc gcaggggctg 3061 cctccacgtc gccggcagct ccgccagtct gcagttccaa ggccgccgaa acggcggagc 3121 agacatgacc ttgtcctagt gaacccactg aattgtgttt atttcccgca gggatcgcaa 3181 gtaagagtta cttttttaaa aaaattgaca aataattatt ataaaagttg acaaataact 3241 cttatgcttc aatttttatt ataaaaatca acaaataaga gttatttgtc aacttttata 3301 ataaaaattg aaaaataaat cttatttgtc agttttttta caaaaagtaa ctcttacctg 3361 cgatccctga tttcccgtaa gctataagcg tctagtgtag agccttttgt accgaactaa 3421 actcctgcct caaaaatcat taaagctgag cgatggaagc atttaa