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LOCUS XM_017138488 4041 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017138488 VERSION XM_017138488.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138488.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4041 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4041 /gene="PIP82" /note="PIP82; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055216" CDS 323..3736 /gene="PIP82" /codon_start=1 /product="protein PIP82" /protein_id="XP_016993977.2" /db_xref="GeneID:108055216" /translation="MSHQHQQQQFHHHHQHIHQVQSESQLERRSSSDLEPNRNRHTDR IGSSMDFRNLCQRIDVESLRAKLPQLKLPKSLPKLRGRKIFRSSRSGTDAAGEGGAGG AVAVGRSSKDAGGGGAAHQSQHHLQVAAPQSQQFINRTPQRISTISSLMYEGEQLEEQ LGRSQPGTYRSAGSLDDDYYAPGSGERASRPISPIKIPASPQGNTKAPVTSLTQRLQR GYKSLSELRIRHIFARQTTVRRDQIEVDRYVEQYERELATEKLARERRDREIAENYDI QIKTLAGSRQNTFDDDAELEHRQLEQRSKLAQSHETDESGMEATPPSLPSRRKPGIAA TRFAKVRKPPLEMEEQSAEREETPPRPSSYRQFVSKLPSLPNLPQFSRSKEDPARQAE NEGALEIQSNSKFGLRQNIKRLRKSIKRPAKMKGKASVNPRDSDEEENEGEEKEKEPP LPPGKISSSGNLRARLSRFASTEQLQQRWRKSFKERAPKGDETKEDATKPGGVLGGLL LGSQLEKTLAKLNERMHQLKFFQRNSNENPAKAREPPKPNTVGHEPVEIDDDEELAAT YHRSDSLEHEDPDGQDDSGEDISAEEAFGQMQPEEEEQSSSLSGNATTHAARQMAKLA EIQAASKSGAAAWSSESLEEIADEDYPRVLIHQEHSDAYESTLIIAVASAKGSGMRTS PYPEIKISKPGPQRLSCSPPEKSKSRSRSPSPEFKTPKCDSNSAWLPNERIIAGFKEQ ANWPAPALYKPKSIDIFEGSSAAFADFDEALRNAPVLRISAGSSIDTSGEEADDSSSR VTRIRVQSPQIGNSRESLMAQEEEEDCYSEEEEEDRDASERPPSESPPPPPLPQRRPP PKRPATPPIYDAVPPPLPISKPPPPPPPPAEVAPPAEAPPVPSPTPIARTMPQRSASM SRPAKPLVKTSSLRLTYREQVRPGDVGKVNKLISRFEGGRPRLCPRRMHSEGEEEAEE VEVDLPEMEKILELQMSEKRAVDSVTPTNRGAVLIPQITLNNNNQDDDEIVGSGKKKT MELALDRQNSNCSRSEYGSPLSFPSSRRSSTPTNISIPNLSSNPNQNQNLNQNQNPNP NANQILQHQRRSRRSMTRDDDNFYSFDSDEENSYYSISPSGSSRYVVEI" polyA_site 4041 /gene="PIP82" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcctactttt agacaccttt tttaaagagg ttttcagttc tctcttgaaa tatgatatac 61 ccaacattta ccccttactt gtaccaaaac aaagggttgg aaaagccccc gtgtgtgcta 121 attgaattag cgcttttcca ttgacaggtg ccaggtgcct cggccgtagt ccgtgttttt 181 ctgcgctatt ctccgccgga gcctcttcaa attggctaaa atgctgaact gcatcggacg 241 ttccaagttt gccgttttca atttcggttt tagcttccca aaggcattac tataatccag 301 tggatatata ctttttaagg cgatgagcca ccagcatcaa cagcagcaat tccatcatca 361 ccatcagcac atccatcagg tgcaatcgga atcgcaattg gagcgacgta gctcctccga 421 tttggaacca aataggaata ggcacacgga tcgcattggc tcctcaatgg attttcggaa 481 tctatgccag cgcatcgatg tggaaagttt gagagccaaa ttgccccaat tgaagttgcc 541 caaatcgctg cccaagttgc gtggtcgcaa gatatttcgc agttcccgca gtggaacaga 601 tgcagctgga gaaggaggag caggaggagc agtagcagtg gggagatcct ccaaagatgc 661 aggaggagga ggagcagccc accaatcgca gcaccacctt caagtggcgg ctccgcaatc 721 gcagcagttc ataaaccgaa cgccccagcg gatctccacg atcagttcgc tgatgtacga 781 gggcgagcag ctggaggagc agctgggtag atctcagcca ggaacctaca gaagcgctgg 841 cagtctggat gatgactact atgctccggg cagcggagag cgagcatcgc gacccattag 901 tcccatcaag ataccagcct cgccgcaggg gaataccaag gcccccgtta cctcgctaac 961 ccaacgattg cagcggggct acaagagcct cagcgaactg aggatcaggc acatcttcgc 1021 caggcagacg acggtgcgaa gggaccaaat cgaggtggat cgctatgtgg agcagtacga 1081 gcgggagctc gccacggaga agttggccag ggagcggcgg gatcgggaga tagccgagaa 1141 ctatgacatc cagatcaaga cgctggcggg cagccggcag aacaccttcg acgacgacgc 1201 ggagctggag caccgacagc tcgagcagag gagcaagttg gcccaaagcc acgagacgga 1261 cgagagcggc atggaggcca cgccgccgag tctgccgagt cgccggaagc ccgggatagc 1321 ggccaccagg ttcgccaagg tgcggaagcc tccgctggaa atggaggagc aatcggcgga 1381 gcgggaggag actccaccac gtcccagtag ctataggcag tttgtcagca agttgcccag 1441 tctaccgaac ctcccacagt tctccaggag caaagaggat ccagccaggc aggcggagaa 1501 tgagggagca ctggaaatcc aatccaattc caagtttggc ctgaggcaaa acatcaagag 1561 actccgaaag tccatcaaac gaccggccaa gatgaaaggc aaggcttcgg taaatccacg 1621 agattcggat gaggaggaaa acgaaggaga ggagaaggag aaggagccac cactaccacc 1681 tggcaagatc agctcctcgg ggaatctgcg agcccgtctc agtcgctttg cctccacgga 1741 gcaactgcag cagcgctggc gaaagagctt caaggagcgg gctcccaaag gggatgaaac 1801 caaggaggat gccacgaaac caggaggtgt cctgggtggc ctgctgctgg gctcgcagct 1861 ggagaagacc ctggccaaac tgaacgagcg gatgcatcag ctcaagtttt ttcagcgaaa 1921 ctccaacgag aatccagcga aagcgaggga gccacccaaa ccgaataccg tgggccatga 1981 gcccgtggag atcgatgacg atgaggagct ggcggccacc taccatcgca gcgatagcct 2041 cgagcatgag gatccggatg ggcaggatga cagcggcgag gatatatccg ctgaggaggc 2101 ctttggccag atgcaaccgg aggaggaaga gcaatcgtca tccctatcgg gaaatgcgac 2161 cacccacgct gctcgccaaa tggcaaagct ggcggagatt caggcggcgt caaagagcgg 2221 agcggccgcc tggagcagcg aatcgctgga ggagatcgcc gacgaggact atccgcgggt 2281 gctcatccac caggagcact cggatgccta cgagtccacg ctgatcatag cggtggcctc 2341 ggcgaagggc agtggaatga gaacttcacc ctatccggag attaaaatct ctaagccagg 2401 acctcaaagg ttatcctgct ctcctccaga gaaatcgaaa tctcgatctc gatctccttc 2461 acccgaattc aagaccccga aatgcgattc caacagcgct tggctgccca acgaacggat 2521 catcgccggc ttcaaggagc aggccaactg gccagctccc gccttgtaca agcccaagag 2581 catcgacatc ttcgagggct cctccgcggc ctttgccgac ttcgatgagg cactgcgcaa 2641 tgcacccgtc ctgaggatca gtgccggcag tagcatcgat accagtggcg aggaggcgga 2701 cgacagtagc tcccgggtga ccagaatccg cgtgcagagt ccgcagattg gcaacagcag 2761 ggagagcctg atggcccagg aggaggagga ggattgctat tcggaggagg aggaggagga 2821 cagggatgcc tcggagcgac cgccttcgga gtcgccacca ccgccgccac ttccacagcg 2881 acgtccgccg cccaagcgac cggccactcc gcccatttac gatgcagtgc ctccgccgct 2941 gcccattagc aagccacctc ctcctcctcc tccgccggca gaggtagctc ctccagcaga 3001 ggctccccct gttccctctc ccactcccat tgccaggacc atgccccaga gaagcgcctc 3061 catgtcgaga ccggccaagc cgctggtgaa gaccagctcc ctgcgactca cctacaggga 3121 gcaagtgcgt cccggggatg tgggcaaggt caacaagctg atatcccgtt tcgagggcgg 3181 aagaccgaga ctctgccccc ggcgaatgca cagcgagggg gaggaggagg cggaggaggt 3241 ggaggtggat ctgccggaga tggagaaaat cctggaactc cagatgagcg aaaaaagagc 3301 cgtggactcg gtgacaccaa cgaatcgagg agctgtgctt ataccgcaaa taactctgaa 3361 taacaataat caggatgatg atgagatcgt tgggagtggg aaaaagaaaa ccatggaact 3421 ggctctggat cgccagaact ccaattgcag ccgatccgaa tacggttcac cattatcctt 3481 tcccagcagc cggcgaagct cgacgcccac caacatttcc atcccgaatc tcagttctaa 3541 tcccaaccag aatcagaatc tgaatcagaa tcagaatcca aatcccaatg ccaaccaaat 3601 cctgcagcac caacgacgca gccgacgatc catgacccgc gacgatgaca atttctatag 3661 cttcgatagc gacgaagaga acagctacta ctctataagt ccctcgggca gcagtcgcta 3721 tgtggtggag atctgatcga aaaaatagga tttaatatag cttagttaca agaaaaaaca 3781 tgtattaatg taaactcaat tattaactat tgaaaactta aatcaaaaga tttaatagag 3841 agtagttcca gaacccaaag tatttttttt gaaattccca aaaatataat aacaaaaaaa 3901 caatgttata atccaaatcg gcaaacctaa aacatatttt tttctctagc ctaagctttt 3961 acttaacaaa taaagtacaa cttgtataac ttgaaagtaa atacaataat aaacaagcga 4021 tatcaagtat cgtatatata a