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LOCUS XM_017138105 2454 bp mRNA linear INV 09-DEC-2024 (DIP-alpha), mRNA. ACCESSION XM_017138105 VERSION XM_017138105.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138105.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2454 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2454 /gene="DIP-alpha" /note="Dpr-interacting protein alpha; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108054966" CDS 75..1748 /gene="DIP-alpha" /codon_start=1 /product="lachesin" /protein_id="XP_016993594.2" /db_xref="GeneID:108054966" /translation="MRITAKRLFRNSPLARFDRNGKMIIHLLVVVSLLEAIGAFQPEF VESISNVSVAVGRDATFTCHVRRLGGYRVGWLKADTKAIQAIHENVITHNPRVTVSHL DQNTWNLHIKAVSEEDRGGYMCQLNTDPMKSQIGFLDVVIPPDFISEDTSSDVIVPEG SSVRLTCRARGYPEPIVTWRREDGNEIVLKDNVGTKTLAPSFRGEVLKLSKISRNEMG SYLCIASNGVPPSVSKRISLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINY WIKDTGEMIVTSGKYHVQESSQSMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDSS IRLYEIPGPNRNKNPLNGGGKGGGGGGGAGGSLDADANDILKQKQQVKVTYQPEDEEL QYGSSEDFEGEGGEGGGLTPLSPHVYYTSGNKPATHKPGSSGGNQHQHQHQQHHHHHH HQQHGGGGGAGGAGGGGPGGSPTGGGEMGGITRKPPPYYGGNTEVRGPIDNNEMSSGS GDSRLLRRGHHFTLLAILLVLLVLPRSWHCRQPFLMGLSTLSGLLLSLL" misc_feature 219..461 /gene="DIP-alpha" /note="Immunoglobulin like; Region: IG_like; smart00410" /db_xref="CDD:214653" misc_feature 249..263 /gene="DIP-alpha" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409549" misc_feature 288..302 /gene="DIP-alpha" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409549" misc_feature 381..407 /gene="DIP-alpha" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409549" misc_feature 528..794 /gene="DIP-alpha" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 561..575 /gene="DIP-alpha" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409562" misc_feature 600..614 /gene="DIP-alpha" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409562" misc_feature 687..701 /gene="DIP-alpha" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409562" misc_feature 729..746 /gene="DIP-alpha" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409562" misc_feature 771..782 /gene="DIP-alpha" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409562" misc_feature 804..1085 /gene="DIP-alpha" /note="Immunoglobulin domain; Region: Ig; cl11960" /db_xref="CDD:472250" misc_feature 855..869 /gene="DIP-alpha" /note="Ig strand B [structural motif]; Region: Ig strand B" /db_xref="CDD:409570" misc_feature 894..908 /gene="DIP-alpha" /note="Ig strand C [structural motif]; Region: Ig strand C" /db_xref="CDD:409570" misc_feature 987..1001 /gene="DIP-alpha" /note="Ig strand E [structural motif]; Region: Ig strand E" /db_xref="CDD:409570" misc_feature 1029..1046 /gene="DIP-alpha" /note="Ig strand F [structural motif]; Region: Ig strand F" /db_xref="CDD:409570" misc_feature 1068..1079 /gene="DIP-alpha" /note="Ig strand G [structural motif]; Region: Ig strand G" /db_xref="CDD:409570" ORIGIN 1 aattttttct gtgcagtgaa actgttttgt tcgcgtgccg atcgcaaatg tcgttgcgga 61 attgttgata ccaaatgcga atcacggcga aacggttatt tcggaattct ccactcgccc 121 ggttcgatcg gaatggcaaa atgataattc acctgctggt cgtcgtttcg ctcctggaag 181 ctattggcgc ctttcagccg gagttcgtgg agagcatttc caacgtgtcc gtggccgtcg 241 gacgcgatgc aaccttcacg tgtcacgtgc gacgtttggg gggctatcgg gtgggctggc 301 tcaaggccga caccaaggcc atccaggcca ttcacgaaaa cgtgatcacg cacaatcctc 361 gtgtcacggt gagtcatttg gaccagaaca cgtggaatct gcacataaaa gcggtttccg 421 aggaagatcg aggcggctat atgtgccaac taaacacgga tcccatgaag agccagatcg 481 gcttcctgga cgtcgtgatt ccgccggact tcatcagcga ggacacctcc tcggatgtga 541 ttgtgccgga gggcagttcc gtgcgattga catgtcgggc ccgtggctat ccggaaccga 601 ttgtcacctg gcggcgcgaa gacggcaacg agattgtcct gaaggacaat gtgggcacca 661 agaccctggc accctctttt cgcggcgagg tgctgaagct gtcaaagatc tcgaggaacg 721 agatgggctc ctatctgtgc atcgcctcca atggagtgcc cccatcggtt tccaagcgca 781 tctccctcag catacacttt catccggtca tccaagtgcc gaatcaatta gtcggcgcac 841 cacttggcac tgatgtccaa atcgagtgtc acgtcgaggc ctcgcccaaa tcaattaact 901 actggattaa ggacacggga gagatgattg tgacttcggg caagtaccat gtccaggaga 961 gttcgcagtc catgtacgag accaaaatgt cgatgatagt caggaagttt cagaaagatg 1021 atgtcggatc ctatcgctgc atagccaaaa actcactggg cgaagtcgac agcagtatcc 1081 gtttatatga aatccccgga ccgaatcgta ataaaaatcc gctgaacggc ggcggaaaag 1141 gcggtggcgg cggaggaggt gcgggcggaa gcctggatgc ggatgccaat gacattttga 1201 agcagaaaca acaagtcaaa gtcacctacc agccggagga cgaggagctg cagtacggat 1261 cctcggagga tttcgagggg gagggcggcg agggcggtgg gctgacaccg ttatcgccgc 1321 acgtttacta caccagcggc aataaaccgg ccacacataa gccgggcagc tcgggcggca 1381 atcagcatca gcatcaacat cagcagcacc accatcacca ccaccaccag cagcacggcg 1441 gcggcggtgg ggcaggtggg gcaggtggcg gtggtccggg tggttcgccc actggtggtg 1501 gcgaaatggg gggcataacc cgcaagccgc cgccatatta cggcggcaat acggaagtgc 1561 gcggccccat cgacaacaac gaaatgagct ccggctccgg cgattcgcga ctgctgcgtc 1621 ggggtcacca cttcaccctc ctcgccatcc ttctcgtcct gctcgtcctg cccaggagtt 1681 ggcactgtcg acagccgttc ttaatgggcc tgtcgaccct gtccggcctg ctgctcagcc 1741 ttttataata cgcagtctaa tggactcacc agcacatcca gcagcagact caacaacaca 1801 cgggaggcag cgaaggaaaa agaaaggaca ttcatcaggc acactatggt gggcaatacg 1861 ctagggatat caacaatact ttcaccaaca ctcattttta accaggaaca cacagaaatg 1921 ctgaggtttg taattcttgg tccttgggac tagacaacaa cactttcacc aacagtacat 1981 gtaaaacact aactctcaat cagacaaggc aaaagtccaa gggacttagt aacactttca 2041 ccaacaaatg attcagtgtt aaaaaagtct agaatagaca acaacacttc aacaacactt 2101 tcaccaacag tatatgtaaa acacaaactc tcaatcagac aaagcaaaag tccaagggac 2161 tcaacaacac tttcaccaac aaatgtttca gtgttggaaa aagtccaagg gactgaaagc 2221 attcacacaa gcattccaca acactttcat caatggtctc tttgaacact tactctcaac 2281 cataaggaga cgccaagcat aagacacaca tgttgtagta gcaaatgtta aattgtttat 2341 aacataaatt aaataagaaa gaaaaacaca aaaaacaggg atggtgttcg gaggcatccg 2401 tatttagtaa atgtatttaa cgcaagaatt tctagagtta ccgaaacatt ttta