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LOCUS XM_017138102 1948 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017138102 VERSION XM_017138102.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138102.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1948 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1948 /gene="Rala" /note="Ras-like protein A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054963" CDS 289..882 /gene="Rala" /codon_start=1 /product="ras-related protein Ral-a isoform X2" /protein_id="XP_016993591.1" /db_xref="GeneID:108054963" /translation="MSKKPTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTK ADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQ EFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTREN VDKVFYDLIRDISSRKKQRQTDVKQPPKPNSHCCQLL" misc_feature 322..810 /gene="Rala" /note="Ral (Ras-like) family containing highly homologous RalA and RalB; Region: RalA_RalB; cd04139" /db_xref="CDD:206710" misc_feature 340..363 /gene="Rala" /note="G1 box; other site" /db_xref="CDD:206710" misc_feature order(343..348,487..495,499..504,514..516,523..525, 568..570,574..576,583..588,595..600,607..609) /gene="Rala" /note="GDI interaction site [active]" /db_xref="CDD:206710" misc_feature order(346..366,394..399,415..417,490..492,658..663, 667..669,748..753) /gene="Rala" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206710" misc_feature order(361..366,406..408,412..414,430..435,472..477, 481..483,487..492,754..756) /gene="Rala" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:206710" misc_feature order(385..387,391..393,418..435,445..447,457..462, 757..768,772..774) /gene="Rala" /note="effector interaction site [active]" /db_xref="CDD:206710" misc_feature 409..432 /gene="Rala" /note="Switch I region; other site" /db_xref="CDD:206710" misc_feature 415..417 /gene="Rala" /note="G2 box; other site" /db_xref="CDD:206710" misc_feature 481..492 /gene="Rala" /note="G3 box; other site" /db_xref="CDD:206710" misc_feature 487..543 /gene="Rala" /note="Switch II region; other site" /db_xref="CDD:206710" misc_feature 658..669 /gene="Rala" /note="G4 box; other site" /db_xref="CDD:206710" misc_feature order(694..699,706..708,718..720,742..744) /gene="Rala" /note="alternate GDI interaction site [active]" /db_xref="CDD:206710" misc_feature 748..756 /gene="Rala" /note="G5 box; other site" /db_xref="CDD:206710" polyA_site 1948 /gene="Rala" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttcgcaccgc tattcagttt cacactttcg accaaatcca tcggttttta tttgcggcgg 61 cggaaaagag aaaagaaacc gaaagccacc aacttattgt tgtgatccga tcctgtttcc 121 gcaggctcca ctatctctgt cgcggccccc acttttttgt tcagtgcatc cagtgccact 181 acacacagca acaacaaacg aagcgtcagc ccaaagcgga cacgcagaac acagaaaagg 241 aaaacgaaac agagagcgga accgagtgag agagcagatc ccgccatcat gagcaagaag 301 ccgacagccg gaccggcgct ccacaaggtc atcatggtgg gcagtggcgg cgtgggaaag 361 tccgccctca cactgcagtt catgtacgac gagttcgtcg aggactacga gcccaccaag 421 gccgatagct ataggaaaaa ggttgtgctg gacggggagg aagtacaaat agatatattg 481 gatacggctg gtcaggagga ttatgccgcc atcagagaca attactttcg cagcggcgag 541 ggattcctct gtgtcttctc catcacagac gacgaaagct tccaggcaac ccaggaattc 601 agagagcaga tattgcgggt caagaatgac gagagcatac cgttcctgct ggtgggcaac 661 aagtgcgatc tgaatgacaa gcgcaaggtg ccgctgagcg agtgccaatt gagggcgcag 721 cagtgggcgg tgccctatgt ggagacctcg gctaaaaccc gcgaaaatgt ggataaggta 781 ttttatgatc taatcaggga tatttcatcg cgtaaaaaac aacgtcagac ggacgtgaaa 841 cagccgccga agcccaattc tcactgctgc caactgctgt aggatgaaac agaaaaaccg 901 acaacaacca tacgatgaac aacaaacaac tgcagcagca acaacttgga aaacaacaac 961 ggccacacgg ataacaccaa ccacagaata gaagatgaag aatagaagaa cagaacgata 1021 tgttaataaa taattaactt agagaactcc agaacacaca cacaaacagc agagaatatc 1081 aaaattaatt gccacactca aaactcaaac actcaaacac gtaatccaag ttaacttgca 1141 ttgtaatata cataaatata ttatttaggc aaccaatttt cccgaaaaca tcaaatgaaa 1201 agcacacaga caggcagctt ataaattctg tcgtttagtt ttcgtttttt cttttgaatt 1261 atcgattttt gtgttgcccc gtacaataaa atgttaaaac aaaaactaaa gcttaaacgt 1321 attaaatata atcaatctta gacacctaaa gcaaaaccgt aattatgcaa tttaataaat 1381 gctatagata tttctcttgt ttaattatac atatgcatac attttttgta atattttaaa 1441 gtttaatagc aaaatgcaaa caacacaaac caacaagaaa ccacacagaa aagcttttta 1501 taaatacatc taaatatata tatttaaata tatacaaaat agtttaaagt ataaaacact 1561 taaaatgcta gagaagagaa aaaaacaaag aaaaacgata acaaaaacaa aaaatatctc 1621 caattattaa ttgtaaacga agtgaatcga aacaaatttt taatgcaatt tttgtaattt 1681 tctaagccga aagcaaatga gtagggatat ataaacaaga aatacaaatg aagaatgata 1741 aactaatgtt tgtgacaagc tttggagatt ttcctttact aacggttttt ttcacgctga 1801 aacacatcca atatatattt agcaataact cccgattgat ttgcttcttt gtttacattt 1861 gtaaaactgc attctgtatt gtaatattta agctattatt attatgataa ttattattat 1921 taaatatata agttatatat gcaatcaa