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LOCUS XM_017138099 2073 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017138099 VERSION XM_017138099.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138099.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2073 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2073 /gene="Rala" /note="Ras-like protein A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054963" CDS 290..895 /gene="Rala" /codon_start=1 /product="ras-related protein Ral-a isoform X1" /protein_id="XP_016993588.1" /db_xref="GeneID:108054963" /translation="MSKKPTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTK ADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQ EFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTREN VDKVFFDLMREIRSRKTEDSKATSGRAKDRCKKRRLKCTLL" misc_feature 323..811 /gene="Rala" /note="Ral (Ras-like) family containing highly homologous RalA and RalB; Region: RalA_RalB; cd04139" /db_xref="CDD:206710" misc_feature 341..364 /gene="Rala" /note="G1 box; other site" /db_xref="CDD:206710" misc_feature order(344..349,488..496,500..505,515..517,524..526, 569..571,575..577,584..589,596..601,608..610) /gene="Rala" /note="GDI interaction site [active]" /db_xref="CDD:206710" misc_feature order(347..367,395..400,416..418,491..493,659..664, 668..670,749..754) /gene="Rala" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206710" misc_feature order(362..367,407..409,413..415,431..436,473..478, 482..484,488..493,755..757) /gene="Rala" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:206710" misc_feature order(386..388,392..394,419..436,446..448,458..463, 758..769,773..775) /gene="Rala" /note="effector interaction site [active]" /db_xref="CDD:206710" misc_feature 410..433 /gene="Rala" /note="Switch I region; other site" /db_xref="CDD:206710" misc_feature 416..418 /gene="Rala" /note="G2 box; other site" /db_xref="CDD:206710" misc_feature 482..493 /gene="Rala" /note="G3 box; other site" /db_xref="CDD:206710" misc_feature 488..544 /gene="Rala" /note="Switch II region; other site" /db_xref="CDD:206710" misc_feature 659..670 /gene="Rala" /note="G4 box; other site" /db_xref="CDD:206710" misc_feature order(695..700,707..709,719..721,743..745) /gene="Rala" /note="alternate GDI interaction site [active]" /db_xref="CDD:206710" misc_feature 749..757 /gene="Rala" /note="G5 box; other site" /db_xref="CDD:206710" polyA_site 2073 /gene="Rala" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttcgcaccg ctattcagtt tcacactttc gaccaaatcc atcggttttt atttgcggcg 61 gcggaaaaga gaaaagaaac cgaaagccac caacttattg ttgtgatccg atcctgtttc 121 cgcaggctcc actatctctg tcgcggcccc cacttttttg ttcagtgcat ccagtgccac 181 tacacacagc aacaacaaac gaagcgtcag cccaaagcgg acacgcagaa cacagaaaag 241 gaaaacgaaa cagagagcgg aaccgagtga gagagcagat cccgccatca tgagcaagaa 301 gccgacagcc ggaccggcgc tccacaaggt catcatggtg ggcagtggcg gcgtgggaaa 361 gtccgccctc acactgcagt tcatgtacga cgagttcgtc gaggactacg agcccaccaa 421 ggccgatagc tataggaaaa aggttgtgct ggacggggag gaagtacaaa tagatatatt 481 ggatacggct ggtcaggagg attatgccgc catcagagac aattactttc gcagcggcga 541 gggattcctc tgtgtcttct ccatcacaga cgacgaaagc ttccaggcaa cccaggaatt 601 cagagagcag atattgcggg tcaagaatga cgagagcata ccgttcctgc tggtgggcaa 661 caagtgcgat ctgaatgaca agcgcaaggt gccgctgagc gagtgccaat tgagggcgca 721 gcagtgggcg gtgccctatg tggagacctc ggctaaaacc cgcgaaaatg tggataaggt 781 attttttgat ttgatgcgcg aaataagatc acgaaaaacc gaagattcga aagccacgag 841 cgggcgtgct aaagatagat gcaagaagcg gagacttaag tgtaccctac tttaggcatt 901 aggtatttta tgatctaatc agggatattt catcgcgtaa aaaacaacgt cagacggacg 961 tgaaacagcc gccgaagccc aattctcact gctgccaact gctgtaggat gaaacagaaa 1021 aaccgacaac aaccatacga tgaacaacaa acaactgcag cagcaacaac ttggaaaaca 1081 acaacggcca cacggataac accaaccaca gaatagaaga tgaagaatag aagaacagaa 1141 cgatatgtta ataaataatt aacttagaga actccagaac acacacacaa acagcagaga 1201 atatcaaaat taattgccac actcaaaact caaacactca aacacgtaat ccaagttaac 1261 ttgcattgta atatacataa atatattatt taggcaacca attttcccga aaacatcaaa 1321 tgaaaagcac acagacaggc agcttataaa ttctgtcgtt tagttttcgt tttttctttt 1381 gaattatcga tttttgtgtt gccccgtaca ataaaatgtt aaaacaaaaa ctaaagctta 1441 aacgtattaa atataatcaa tcttagacac ctaaagcaaa accgtaatta tgcaatttaa 1501 taaatgctat agatatttct cttgtttaat tatacatatg catacatttt ttgtaatatt 1561 ttaaagttta atagcaaaat gcaaacaaca caaaccaaca agaaaccaca cagaaaagct 1621 ttttataaat acatctaaat atatatattt aaatatatac aaaatagttt aaagtataaa 1681 acacttaaaa tgctagagaa gagaaaaaaa caaagaaaaa cgataacaaa aacaaaaaat 1741 atctccaatt attaattgta aacgaagtga atcgaaacaa atttttaatg caatttttgt 1801 aattttctaa gccgaaagca aatgagtagg gatatataaa caagaaatac aaatgaagaa 1861 tgataaacta atgtttgtga caagctttgg agattttcct ttactaacgg tttttttcac 1921 gctgaaacac atccaatata tatttagcaa taactcccga ttgatttgct tctttgttta 1981 catttgtaaa actgcattct gtattgtaat atttaagcta ttattattat gataattatt 2041 attattaaat atataagtta tatatgcaat caa