Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017138095 6575 bp mRNA linear INV 09-DEC-2024 echinus (ec), transcript variant X1, mRNA. ACCESSION XM_017138095 VERSION XM_017138095.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138095.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6575 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6575 /gene="ec" /note="ubiquitin specific peptidase echinus; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054960" CDS 324..5624 /gene="ec" /codon_start=1 /product="uncharacterized protein ec isoform X1" /protein_id="XP_016993584.3" /db_xref="GeneID:108054960" /translation="MIKFRYKRKEPTNLVVTPAEGGGGSPSAPGTTVAPTGVVTSPIT VPVQMHHPQLSHLISNNGGTLPRSSPRKLNLDGGDKSATLTRQQSKQKSVSALAKVAS SVELAVMGYNGNGNSMNGINMAGNSERDRCINAVIELFQQLQTSSEPALCPEPLRRAL ASGPLAGRRFPLGCLGDAAECFELLLHRVHSHISPDDGDSCESSACIAHRRFAMRVIE QSVCKCGANSEQLPFTQMVHYVSASALTSQKSLALQSHQQLSFGQLLRAAGNMGDIRD CPNTCGAKIGICRALLNRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQV SEQRWAQQTQHELVGIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKC SRGRYQPLLLLYAVPQQGGGGGVGGGVPDAVTIPTSAPVIRRAVTPSPEKPSLGSTRR AITPTPLRTPPMPTNDYQNLSVIQKSIFPGYLMSSDETDAYISRKTVEHVLSAQYQNL SVIQDKIVAPPGGATPANQQNADKDGGFLSRKPIEAVLSAQLARRQHLQLQRSHSAES SSGHASSSNGSSPPSDGLTMPEHLNQPRRRDSGNWSGDRNSASSASSTTLDNPYLYMV AKRGVAAVPQSPTRHGLPYDPGYDSFSLSSTDSYPPKHALNPQLAKIPEAAMGAMVPN VVPHGHGQLALSGDCEKLCHEADQLLEKSRLVEESHDLETALVLCNAAAGRARAAMDA PYSNPHTMTFARMKHNTCVMRARSLHRRILVEKGAETEAMPELKHMREGSTSSVKHVR QNSKDRTLEKEQQLQQQQQQQQLQFQQLQQQIPASIEIYATLPKRKSPLKTLASSAAA CDDNAIEYEQQVTTTSSPGKPERESRSLFGRKDKDKEKEKRSRSEDRNKLTREFSLTE TLLVNAKDTLKKHKEDKDEKKEKDKSGKKQHKIRRKLLMGGLIRRKNRSMPDLTEAVD DGVASSGNHHHLPHYSTNQGGVTTAAGTLLGSSVDDSAVGLGKHGQHGMSGYISEGHF DYPGSSSASGGGSNAGSNPNPNLERSKLMRKSFHGSGRQLTMVPKVAPPPPMRTSSTL TPQQQQQFHHEANLSNLSAMSSNTSISEDSCQTIITTCAQVHSEQSPLKDLQMLQSAV GQDELPLPLPPMELPPYPSPPHSACHSRQASEDFPPPPPPELDLEPLNQQLSQLQALE AASKHQRQQLDSLEGTTSILAQLQQRQHLLKLRKEQQASHPVDANWLKELQAKQASDL RAMQRKLEASSPSSVRDLAHRFEQTSIRSYASQELLSQAGGQPVGQLRTQMNGLPSGG AGASKLDVDEVDSMPAVRSTHQLLPKPKYEMSQSQIAEEIREVELLNTMVQQTLNQNG VAAPPKRVKKKSVSFCDQVILVATAGNEEDDDFIPNPILERVLRTAQHPNEKVTAQMI QQQQQNMLRLQTEAQPRQQLQQQQQQLQQQLQQQQQQPSPMLGQRPAAAAADMQRYVQ RMQQQQQQQQHQELLRQQQQQQQQQQQQQHRTSMSGIASQQHLQQMDAQYTTMPRPLH HPPPQLGSYSVHLQKHQQLQQQQQQQLQQQQQQQQQAYFSNGNVATTEQVPLPSPYQR VPLPHGYQPAVQAATAGPYYPLPNAQQHQQQQQQQQQQQQLQLQQQQLMAKPVQKKVS FEPGTKGEAECLPPPPPQKNGLPEPAGSPGAPSGAAAGPGGNSSAAITAIPTRVYNNA IVKASAKAVECNLCRKRHVIAPAVYCTNCEYYLQMLNQRR" misc_feature <852..1475 /gene="ec" /note="Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly...; Region: Peptidase_C19; cl02553" /db_xref="CDD:470612" misc_feature <5532..>5600 /gene="ec" /note="protein kinase C conserved region 1 (C1 domain) superfamily; Region: C1; cl00040" /db_xref="CDD:412127" ORIGIN 1 tttcccagtc ggcggacgtg ttttaatcgg cggacccaca agtcccatct agaatcgaat 61 ctcagaggta gaaaccagag tgaagaattg cgcgcgcggc aaaaaatatg aacgctgatt 121 cctaacaagt tcgaaaaaaa aaaaactatt tttttctggt gcctgcaaaa aagcagaaat 181 acaaacaaag ttgttcccga gctgtgctaa aatcaagata aatcattgga atacctcttt 241 atacacgaaa caaaaaatgt ttgctgacat gttggtagtg agaaggcact aggctctgat 301 taccattacc ggacgacagc aagatgatca agttccgcta caagaggaag gaacccacca 361 atttggtggt gactccagca gaaggaggag gaggatcgcc aagtgccccg ggaactacag 421 ttgccccaac tggagttgta acctccccta ttaccgtgcc cgtgcagatg caccaccccc 481 aactgagcca cctgatcagc aacaatggag gcactctgcc caggagcagt ccccggaaac 541 tcaatctcga tggaggcgac aagtcggcca ctttgacccg ccagcagtcc aagcagaagt 601 cggtcagtgc tttggccaag gtggccagca gcgtggagtt ggccgtaatg ggctacaatg 661 gcaacgggaa tagcatgaac ggcatcaaca tggcgggaaa ctcggaaagg gatcggtgca 721 tcaatgcggt tatcgaactc ttccagcagc tgcagaccag ttcggaaccg gccttgtgtc 781 cggagccact gcgtcgagcc ttggccagtg gtccgctggc aggacgacgc ttcccccttg 841 gatgcctggg cgatgccgca gagtgcttcg agctcctgct gcaccgcgtc cactcgcaca 901 tctcgccgga tgacggcgac tcctgcgagt cctccgcctg cattgcccac cgaaggttcg 961 ccatgcgcgt catcgagcag agcgtctgca agtgcggagc caactccgag cagctgccct 1021 tcacccagat ggtccactac gtctccgcct cggccttgac ctcccagaag agtctggccc 1081 tgcagtcgca ccagcagctg agtttcggcc aacttctgag ggccgccggc aacatgggcg 1141 acatacgcga ttgtccgaac acctgtggcg ccaagatcgg catatgccgt gccctgctca 1201 accgtccgga tgtggtgtcc atcggcattg tctgggactc ggagcgaccg gccgccgacc 1261 aggtgcacgc cgtcctgaag gccgtgggca ccagtctgcg gctgggcgac gtcttccatc 1321 aggtcagcga gcagcggtgg gcccagcaga cgcagcacga gctggtgggg atcgtctcct 1381 actacggcaa gcactacacc accttcttct tccacacgaa gctcaaggtg tgggtgtatt 1441 tcgacgacgc gaacgtcaag gaggtgggtc ccagctggga gggcgtggtg gacaagtgca 1501 gccgaggcag ataccagccc ctgttgctcc tctacgcggt tccccagcag ggaggaggag 1561 gaggagtcgg aggaggagtt ccggatgcag tgaccattcc aacgagtgcc ccggtgattc 1621 gtcgcgccgt gactcccagt cccgagaagc ccagtttggg cagcacccga cgggccatta 1681 cccccacgcc cctgaggacg ccgcccatgc ccaccaacga ttaccagaac ctgagtgtca 1741 tccagaagag catctttccg ggctacctga tgagcagcga cgagacggac gcctacatca 1801 gtaggaagac ggtggagcat gtgctgagtg cccagtacca gaatctgagt gtgatccagg 1861 acaagatagt agctcctcca ggaggagcaa caccagctaa ccaacaaaat gccgacaagg 1921 atggaggctt cctcagccgc aagcccatcg aggcggtgct gagtgcccag ctggccaggc 1981 ggcagcacct gcagctgcag cgcagccaca gtgcggagtc cagttcgggc cacgcctcct 2041 cctccaacgg gagcagcccg cccagcgatg ggctcaccat gccggagcac ctcaaccagc 2101 cgcgtcgtcg ggactcgggc aactggtcgg gggatcggaa cagcgccagt tcggccagct 2161 ccaccaccct ggacaatccc tatctgtaca tggtggccaa gaggggtgtg gccgcggtgc 2221 cgcagagtcc cacgcgacac ggtctgccct acgatcccgg ctacgactcc ttctcgctca 2281 gctccacgga ctcgtatccg ccgaagcacg ccctgaatcc ccagctggcc aagattcccg 2341 aggcggccat gggtgcgatg gtgccgaatg tggtgcccca tggacatggt cagctggccc 2401 tgtcggggga ctgcgagaag ctctgccacg aggcggatca gctgctggag aagtcgcgac 2461 tggtggagga gtcgcacgac ctggaaacag cactcgtcct ctgcaatgcg gccgccggaa 2521 gggcgagggc ggccatggat gcgccgtaca gcaatccgca caccatgacc tttgcccgga 2581 tgaagcacaa cacgtgcgtg atgcgggcga ggagcctgca ccgccgcatt ctggtggaga 2641 agggggcgga gacggaggcc atgccggaac tgaagcacat gcgggagggc agcaccagca 2701 gcgtgaagca tgtgcgccag aacagcaagg atcgcacgct ggagaaggag cagcagttgc 2761 agcagcagca gcagcagcag cagttgcagt tccagcagct gcagcagcag atccccgcca 2821 gcatcgagat ctatgccacg ctgcccaagc gcaagagtcc cctgaagacg ctggcctcct 2881 cggcggccgc ctgcgacgac aatgccatcg agtacgagca gcaggtgacc accaccagta 2941 gtcccgggaa gccggagcgg gagagtcgct ccctgttcgg ccggaaggac aaggacaagg 3001 agaaggagaa gcgcagtcgc agcgaggatc gcaacaagct gacccgcgag ttctcgctca 3061 ccgaaacgct gcttgtgaac gccaaggaca cgctgaagaa gcacaaggag gacaaggacg 3121 agaagaagga gaaggacaag agcggcaaga agcagcacaa gatcaggcgc aagctcctga 3181 tgggcggcct catccggcgc aagaaccgct ccatgcccga tctcaccgag gcggtggacg 3241 acggagtggc ctccagtggg aatcaccacc atctgccgca ctactccacc aaccaagggg 3301 gagtgaccac ggcggcgggc acccttctag gcagctccgt ggacgacagt gccgtgggtc 3361 tgggcaagca tggccagcac ggcatgagtg gctacatctc cgagggccac tttgactacc 3421 cgggctcgag ttccgcgagc ggaggaggca gcaatgctgg cagcaatccc aatccgaatc 3481 tcgagcggag caagctgatg cgcaagagct tccatggcag cggcaggcag ttgactatgg 3541 tgcccaaggt ggcgccaccg ccgcccatgc gcaccagctc caccctgacc ccccagcagc 3601 agcagcagtt ccaccacgag gccaacctgt ccaatctctc ggctatgagc tcgaacacct 3661 cgatcagcga ggactcctgc cagacgatca tcaccacctg cgcccaggtt cactcggagc 3721 agagtccgct gaaggatctg caaatgctgc agtctgccgt tggccaggat gagctgcccc 3781 tgccgctgcc gcccatggaa ctgcctccgt accccagtcc gccgcactcc gcctgccact 3841 cgcggcaggc cagcgaggat ttcccgccgc caccgccgcc cgaattggac ctggaacccc 3901 tcaaccagca gctcagccag ctgcaggccc tcgaggcggc cagcaagcac cagcgccagc 3961 agctggactc cctggagggc accaccagca tcctggccca gctgcagcag cgccagcatc 4021 tgctcaagct gcgcaaggag cagcaggcca gccacccggt ggacgccaac tggctgaagg 4081 agctgcaggc caagcaggcc agcgatctgc gggccatgca gcgcaagctg gaggcctctt 4141 ccccttcgag tgtgcgggat ctggcccacc gcttcgagca gacctccatt cgatcctacg 4201 cctcgcagga gctgctctcc caggcgggag gacagccggt gggtcagctg cgcacccaga 4261 tgaacggact gcccagtggc ggggcagggg catccaagct ggatgtggat gaggtggact 4321 cgatgccggc ggtgaggagc acccaccaac tgctgcccaa gcccaagtac gagatgagcc 4381 aatcgcagat cgccgaggag atccgcgagg tggagctgct caacacgatg gtgcagcaga 4441 cactcaacca gaacggagtc gctgcgccac ccaagcgggt gaagaagaag agcgtctcct 4501 tctgcgacca ggtgatcctg gtggccaccg cagggaacga ggaggacgac gacttcatac 4561 ccaatcccat actggagcgg gttctccgca ctgcccagca tcccaacgag aaggtcaccg 4621 cccagatgat ccagcagcag cagcagaata tgctgcgctt gcaaacggag gcgcagccgc 4681 gtcagcagtt gcagcagcag cagcaacagt tgcagcagca actgcaacag cagcagcagc 4741 agccatcgcc catgttgggc cagcgaccag cggcagccgc agcggatatg cagcgatatg 4801 tgcagaggat gcaacagcag cagcagcagc agcaacatca ggagctgcta cgccagcagc 4861 agcagcagca gcagcaacag cagcagcagc aacatcgcac cagcatgagc ggcatagcca 4921 gccagcagca cctgcagcaa atggacgcac agtacaccac catgccgcgt cccctgcacc 4981 atccgccacc tcagctgggc agctactcgg tgcacctgca gaagcaccag caactgcagc 5041 agcagcagca gcaacagttg caacagcagc agcagcagca acagcaggcc tacttcagca 5101 acggcaatgt ggcgaccacc gagcaagtgc ctttgccttc gccctaccag cgagtgcccc 5161 tgccacatgg ctatcaacca gcggtgcaag cagcaacagc tggaccctac tacccactgc 5221 ccaatgccca gcagcatcag cagcagcagc aacagcagca acagcagcag cagttgcagc 5281 tgcaacagca acagctgatg gccaagcccg tgcagaagaa ggtgagcttt gagccgggga 5341 ccaagggcga agccgagtgc ctgccaccgc cgccgccgca aaagaatgga ctgcccgagc 5401 cggcgggatc accaggagca ccgtcggggg cagcagccgg gcccgggggc aactcctcgg 5461 ccgccatcac cgccataccc acccgcgtct acaacaatgc catcgtgaag gcctcggcca 5521 aggccgtcga gtgcaacttg tgccgcaagc ggcatgtgat cgcgccggcg gtttactgca 5581 ccaactgcga gtactacctg cagatgctga accagcgcag atgatgatga cgaccctggt 5641 tgtggaccgt ctctagtgca actttctagc cgtacatgga acccgttaat ctcaagcaat 5701 gcaatgctgc cacgtcgcca ataaggatcc gccaaggatg tacatagcat ggttacaaat 5761 acgtaggtct aaggacgaag ggctggcggg cgactcgagg atcggggcgg aacgcagaaa 5821 cggaggggga acacgcacag tccttctatg gttccacatg agaagctccc gctgtggcac 5881 acaacccacc caccactcac cacccactca tccatccatg tccatgtccc caagcacacg 5941 cacacaagca tattgtacac gcccatccac atatacttgc cctgaggccc taagctgggt 6001 tgtaaacgat gcagctgatc agctgctgca ccgtttacag cctgctcagc gccaaccgtc 6061 gccccattgg acatcgatcg cttgactaaa tgcattccca gatactaaaa actaaagcac 6121 ccgaagcccg gccagtcctt cgtgttcttt tttttccaca acgaatttta tttacatttt 6181 ttacctaagc ctaccacata cgatttattc gccagcagtt tgaaactcag tcgctgagct 6241 tccttgtgcg tgctgttgtc caacgacaca cgcattccat ttttttttaa aatttttttt 6301 gtaattctta atttcagact aagcatacat atttttttaa tttcgtactt aattaggcct 6361 aacgtaagct tactcttttg tgtcttgtgc atttaaacga ttccgtgtat ttatagtgtt 6421 aatactactt ttacagttta tacattatta tatgaagatt atatattttt ataatgactt 6481 ttgaaagaag atttatcttt gcagcatacg agcagcgaga aaagagatgt caagcatcca 6541 caagaatggt aaagaatcat tttttctaaa taaat