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PREDICTED: Drosophila takahashii Poly(ADP-ribose) glycohydrolase


LOCUS       XM_017138093            3476 bp    mRNA    linear   INV 09-DEC-2024
            (Parg), mRNA.
ACCESSION   XM_017138093
VERSION     XM_017138093.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017138093.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3476
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..3476
                     /gene="Parg"
                     /note="Poly(ADP-ribose) glycohydrolase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins"
                     /db_xref="GeneID:108054958"
     CDS             227..2308
                     /gene="Parg"
                     /codon_start=1
                     /product="poly(ADP-ribose) glycohydrolase"
                     /protein_id="XP_016993582.2"
                     /db_xref="GeneID:108054958"
                     /translation="MSQQQQPPDGGISEMETEEEQPATESWRGLPMEAIRRHLRPFEL
                     ETLPAVAAGNLHRVMYQLPIRETPPRPHKSPGKWDSEHVRLPCAPESKYPRENPDGST
                     TIDSRWGMIERALLQPIETSEELQAAILSYNTTYRDQWHFRALHQLLDEELDESESRV
                     FFEDLLPRIIRLALRLPDLIQAPVPLLKQHKNASLSLSQQQIACLLANAFLCTFPRRN
                     TLKRKSEYSSFPDINFNRLYQSTGPAVLEKLKCIMHYFRRVCPTERGASNVPTGVVTF
                     TRRSGLPEHQVDWAQSAAPLGDVPLHVDAEGTIEDEGVGLLQVDFANKYLGGGVLGHG
                     CVQEEIRFVICPELLVGKLFTESLRPFESLVMLGAERYSNYTGYAGSFEWSGNCEDST
                     PRDSSHRRQTAIVAIDALHFAQSQHQYREDLMERELNKAYIGFVHWMITPPPGVATGN
                     WGCGAFGGDPYLKALLQLMVCAQLGRPLAYYTFGNTEFRDDFHDMWLFFRSEGTTVQQ
                     LWRVLRSFSRLVKEKGSKNLNLYEFIREELKKKLKEEAPSAEAGTSKASGSGEAEAKP
                     SKSAKTSPEITKKKDTITQQSPDLFPAQSSLDNSDSSPEQAILMLSDDEEANAMMEAA
                     SLEAKNSEELSSSSTTKTGGSGGRQLTLLEMLDSHYEKGQASKRPRKAPEGPAKSRKE
                     NNVEDKKDQDD"
     misc_feature    683..1696
                     /gene="Parg"
                     /note="Poly (ADP-ribose) glycohydrolase (PARG); Region:
                     PARG_cat; pfam05028"
                     /db_xref="CDD:461528"
     polyA_site      3476
                     /gene="Parg"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caaacaaatg ttatcgatgt ttggccacct ctagtcggag gaccacctga tatcgattag
       61 cctatcaaag tggaccacct gatatcgaaa tacggacaac ataagatatt ccaggatatt
      121 ccagaggatc taccaatttt cggctcattg ccgcggagca agtgcatcgt ccgtcctgac
      181 caaccggctg ggcgcgactg cttggttagg atccgcatcc gccgcaatgt cgcaacaaca
      241 acagccgccg gatggcggga tttccgaaat ggaaacggag gaggagcagc cggcaaccga
      301 atcctggcgt ggcctgccca tggaggccat acgtcgtcac ctccgaccct tcgaactgga
      361 aacgctgccg gccgtcgccg ctggcaatct gcaccgggtt atgtaccaac tgcccatccg
      421 ggagacgcca ccgcggccgc acaaatcgcc gggcaagtgg gactcggagc atgtgcgtct
      481 gccgtgcgcg ccagagtcga aatacccgcg ggagaatccc gatggcagca ccaccatcga
      541 ttcgcggtgg ggcatgatcg agcgggctct gctgcagccc atcgaaacga gcgaggagct
      601 gcaggcggcc attctgtcgt ataacacgac ataccgcgac cagtggcact tccgggcgct
      661 ccatcagctg ctcgacgagg agctggacga gagcgagtcg cgggtcttct tcgaggacct
      721 gctgccgcgc atcattcgcc tggctttgcg actgccggac ttgatccaag cgccggtgcc
      781 gctgctcaag cagcacaaga acgcctcgct gagcctgagt cagcagcaga tcgcctgcct
      841 gctggccaac gccttcctct gcaccttccc gcggcgcaac acgctgaaga ggaagtccga
      901 gtacagcagc tttccggata tcaactttaa cagactctat caatccacgg gtcccgccgt
      961 gctggagaag ctcaagtgca tcatgcacta ctttcggcgc gtgtgtccca cggagcgcgg
     1021 tgccagcaat gtgcccaccg gcgtggtgac cttcacgcga cgcagcggcc tgccggaaca
     1081 tcaggtcgac tgggcgcaga gtgcggcgcc gctgggcgat gtgccgctgc atgtggacgc
     1141 cgagggaacg atcgaggacg agggcgtcgg cctgctgcag gtggactttg ccaacaagta
     1201 tctgggcggc ggtgttctgg gccatggctg cgttcaggag gagatccgct tcgtcatctg
     1261 tccggagctg ctcgttggca agctgttcac ggagagtctg cgcccgttcg agtcgctggt
     1321 catgctgggc gccgagcggt atagcaacta tacgggatat gccggcagtt tcgagtggtc
     1381 cggcaactgt gaggattcca caccgcggga cagctcgcat cggcggcaaa cggccattgt
     1441 ggccatcgat gccctgcatt ttgcccaatc gcagcatcag tatcgcgagg atcttatgga
     1501 gcgggagctg aacaaggcgt atatcggatt tgtccactgg atgatcacgc cgccgccggg
     1561 agtggctacc gggaattggg gctgcggagc cttcggcgga gatccctacc tcaaggccct
     1621 gctgcagctg atggtctgcg ctcaattggg cagacctttg gcctactata ccttcggtaa
     1681 taccgagttc agagatgatt tccatgacat gtggctgttc tttcgcagcg aaggcactac
     1741 ggtgcagcag ctttggaggg tattaagatc cttcagtagg ctggtcaaag agaagggctc
     1801 caaaaatcta aatctatacg aatttattag ggaggaactg aagaagaagc tcaaagaaga
     1861 ggctccatcc gcagaggcgg gaacatctaa ggcgagcggc tcaggagaag cggaagcaaa
     1921 gccctcgaaa tcagcgaaaa cgtcgccgga aatcaccaaa aaaaaagaca ccattacgca
     1981 gcaaagtccc gatctctttc ccgcgcaatc atcgctggat aattccgatt cctcgccgga
     2041 acaggccatt ctcatgctgt ccgatgacga ggaggccaat gccatgatgg aggccgccag
     2101 tttggaggcg aaaaacagcg aggagctcag cagcagcagc accacgaaaa caggaggatc
     2161 cggtggccgc cagttgacgc tgctcgagat gctcgactct cattacgaaa agggacaggc
     2221 ctcgaagagg ccaagaaaag cacccgaggg tccagccaaa agccggaagg agaacaatgt
     2281 ggaggacaag aaggatcagg atgactaagt gatattgccc tagaggattt gtactgccct
     2341 aaaataaaaa gttctaaact aagacgtttt aaagaaggct taaaatttga atgtgcttgg
     2401 tttacaatgg agtttgcatt ttaaacatgc agacattttt ttttggaaac ttaaatgctc
     2461 tttgacactt ggtaaatttg aagcgttgct tacagtcttt taattttaaa aattgttaca
     2521 ttttctatta aaaattctta tgaaaacaca atttttttct taggttaata tttatataaa
     2581 aatattaaat tagttgactt ttaaataaaa attttgagaa atatttaaaa ctttcctgta
     2641 ctctatctct gttcaataat gttaaagtta tcattttatg atattaaaaa aactttaatt
     2701 tacgtacata aaacaagatc tatgtgtata gcaggagttg tataacgttg cattattaaa
     2761 tagggtaaac acattaaaaa atgagatatt cgattattat caattttata ttcaattttc
     2821 aaagaattgt tataatagtt gtattacaag caaaaccata ttagtatgtt gtataccgat
     2881 attattattt gtgaagtgat atcatgttaa tcatgttaat ggattcaaag aggacattga
     2941 taaattgtaa aaaatgtaag ttccgtacat taccgatgga caatttaaga tttataattt
     3001 tctcagcatc ttgatattct tgtaattttc taggctaaga tagcaaaagg catgtataaa
     3061 aattgtttgt agattcttta aatgcctaat atataatatg tagttgaact tagtaaagtt
     3121 tttttaacca aaaccttttt attttcaata agagtttatt tcacaacaac aagaacatca
     3181 acaacaacca cgaaaatagg tatgtaaatg gcaactcgtt ttcagttaat taaaactatg
     3241 caacatgaag ttgttaagaa aaattcagca tagagtttta taaaataaaa aagcgaagta
     3301 tttcggataa tattatgttt ggagtttcaa aacaacaaag ctttaacaat tttttccagg
     3361 tcgttcatgg caactaatgg aagttcgtac agacctatta tgttaatact ttttcgaaaa
     3421 aattattatg tttcgataaa tcattaaaaa aagtgtataa cttcaaaatt tcaaaa