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LOCUS XM_017138092 5402 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017138092 VERSION XM_017138092.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138092.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5402 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5402 /gene="Mnt" /note="Mnt; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108054957" CDS 794..2611 /gene="Mnt" /codon_start=1 /product="myb-like protein A isoform X3" /protein_id="XP_016993581.2" /db_xref="GeneID:108054957" /translation="MSNIGGINTLLRAAEFIEKLNEVPQAGSGGAGALGVGVGVALPQ QQSLLGKSISIINNNNSSQHNRNSSSSSNGIIATPPFTNGNCNGFVGIGNVNVNVNVN ANGNGLSNGHSSPRSQLAAAAHDYELAAVVGSAVANGHSEGRPLISAPRDQSADHPQQ HLQFQHNLSYVRSANGGVVYGLPADSVDSSAAAGSVAMNIASSAPAAGSQLTAHHHTG HGGRRRTTSSNSNGAGTREVHNKLEKERRAQLKECYDLLKKELPMRDEDRKKTSNLTI LDTAHKFVKQLTQRDREQEAEVERLAKQKIELQKRLKRLGLRRETPPTDQQSIPQAIK AICVATTTAPVPPTAASGRNGTTILFDAGNACATGQLTTVINKSNATPASGAGATAAA NGSISSKHNGNHTGGAATTLTPAMGIMTIKNGNGNGNGNILAISPTAIQQQHHHNGSP AGSPSAIGGATSGATITRGSPTPSTPSPSPSSSSSGVSSSASFMGGGSSSSSSSSSSS SSSSSSSSSSSTSSSSSSPTQQQLIATPTATAHLVGARNVGLKFHGGAGGAASALNGG ATIVAAAVPTGGGSANGFHQADKDRNYNFLMLSAGTTAQ" misc_feature 1493..1729 /gene="Mnt" /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-binding protein Mnt and similar proteins; Region: bHLHzip_Mnt; cd11402" /db_xref="CDD:381408" misc_feature order(1508..1513,1520..1525,1529..1534,1544..1546, 1604..1612) /gene="Mnt" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:381408" misc_feature order(1541..1546,1550..1567,1571..1576,1613..1615, 1622..1624,1634..1636,1640..1648,1652..1657,1661..1666, 1673..1675,1685..1687,1694..1699,1703..1708,1715..1720, 1724..1729) /gene="Mnt" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:381408" misc_feature order(1541..1543,1550..1555,1559..1564,1571..1576, 1613..1615,1622..1624,1634..1636,1640..1648,1652..1657, 1661..1666,1673..1675,1685..1687,1694..1699,1703..1708, 1715..1720,1724..1729) /gene="Mnt" /note="putative tetramer interface [polypeptide binding]; other site" /db_xref="CDD:381408" polyA_site 5402 /gene="Mnt" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgcttctgt cattgcattc ggcgggtagg atcaagaaaa agaaacaaga aacaccaaaa 61 ccaaaaacac aagaaccgaa accgaaacag acaacacaca aaaattaaca acaaatcgaa 121 aaaaacagcc tttatttttt tcacgtttaa gtgcaaccac acaaagaata agaagccaaa 181 ccagaagtag aagaagaagg agcagcagag tgcttaataa ttctaacgcc caatctacta 241 aaaacaaaca ccaaaatcaa aactgcaacc atatataaac aacaacagca agcaagaacc 301 accgaaaaat caacaacatc aaaagtggca gaaaactcac caagttcaac aataatattc 361 aacaaccagc taaattgtaa aacaagaaac caccatcagc aaccaataat ttcaacaacc 421 aatcgtcaat aaaagccaca cacaccaaca attttcaaca acaatatttt caacaatttt 481 caagtacttt taacaacaat ttccaagaat attttttgaa aaaacaaaag tagaaaagtt 541 ttaaacaaca atagtatcca aaagaagtta aacaacaatt tccacaataa ctgtaaacgt 601 gtcgcgactt aaagctgctg cctcttctgt ccctctctct cgcgtgtatt cgtcctgttc 661 agtgttggtg tacgagaatc gtgttttgtt ttttttgtca aacttatata tccatttctt 721 gtattacgcg ttcgtcgtcc ttgttacgtg tgtgtgtgtg cgagaagagg gagtgcgcta 781 gtttgtgtat gctatgtcaa atatcggggg cattaatacg ctcctccggg cggctgaatt 841 tatcgagaag ctgaatgagg tcccgcaggc gggaagcggt ggcgccggcg cacttggagt 901 cggcgtgggc gtggcactgc cccaacagca gtcgctgctg ggcaagagca tctccattat 961 caacaacaac aatagcagcc agcacaatag aaatagcagc agtagcagta acgggattat 1021 tgcaacgcca ccgttcacga acggaaattg caacggtttc gtcggcatcg gtaacgtgaa 1081 cgtaaacgtt aacgtcaatg cgaacgggaa cggtctgagc aacggtcaca gcagtccgcg 1141 cagtcaatta gccgccgctg cccacgatta tgagcttgcc gccgtcgttg gcagcgcagt 1201 cgccaacgga cacagcgaag gtcgccccct catctcggca ccccgagatc agtcggcgga 1261 tcatccgcag cagcatctgc aattccaaca caatctcagc tatgtgagaa gcgccaacgg 1321 tggtgttgtc tatggcctgc cagcggattc ggttgactcc tctgcagccg ccggatcggt 1381 ggccatgaac attgcctcct cggcgccagc ggcaggatct cagctgacgg cgcaccatca 1441 cacgggacac ggcggacgca ggcgcaccac cagttccaac agcaatggag cgggcactcg 1501 ggaagtgcac aacaagctgg aaaaggagcg acgcgcccag ctgaaggagt gctacgacct 1561 gctcaaaaag gagctgccca tgcgggacga ggaccgaaag aagacctcca atttgacaat 1621 actcgatacg gcccacaaat ttgtcaagca attgacgcag cgtgatcgcg agcaggaggc 1681 ggaggtggag aggctggcga agcagaagat tgagctgcag aagcggctga agcgattggg 1741 tttgaggagg gaaacgccgc ccaccgatca gcaaagcatt ccacaggcca tcaaagccat 1801 ttgcgtggca acaaccaccg caccagtacc accaacggcg gccagtggtc gcaatggaac 1861 cacaattcta ttcgacgcag gcaacgcctg tgccactggg cagctaacaa ctgtgataaa 1921 caaatcaaat gccacaccag catcaggagc aggagcaacc gcagcagcca acggcagcat 1981 tagcagcaaa cacaatggca accacacagg aggagcagca accacactga ctccggccat 2041 gggtatcatg acaattaaga acggcaatgg caacggcaac ggcaacatac tggcaatctc 2101 accaacggca atccagcagc agcaccatca caacggcagc ccagcgggca gtccatcggc 2161 aattggagga gcaactagtg gagccaccat tacacgtggc tcgcccacgc catcgactcc 2221 atcgccgtcg cccagctcct cgtccagtgg cgtctcgtcg tcggcctcgt ttatgggcgg 2281 cggctcctcc tcgtcgtcct cctcctcatc atcctcctcg tcgtcgtcct cctcgtcgtc 2341 gtcatccagt acgtcgtcca gttcgtcgtc gcccacgcaa cagcagctga tcgccacgcc 2401 cacggccacc gcccatttgg tgggcgcccg caatgttggc ctgaaattcc acggcggtgc 2461 gggtggtgcg gccagcgcct tgaatggcgg tgccaccatt gtggccgctg cagtgccaac 2521 tggcggcgga tcagcgaatg gtttccatca ggcggacaag gaccgcaatt acaatttcct 2581 gatgctcagt gctgggacaa cggcgcagta aaccaacaaa caagaaacaa caacaacaac 2641 atcaaacgaa cacctacaac aataatgaaa acaacaacaa caactgaatt gtgtgcaaca 2701 gctcccacct tataaaagaa aaaatgtaac aacaactaga agaaggttct ctgaaaactc 2761 ttttttctta caacaagata caaacaaata ttatgtattt ttcacacttt cgcacacatt 2821 gaaaacaaca acaacagcag cagcagcagc agcagcagca aaaagaaaat aacaaagctg 2881 taatttttta tgtaaaacaa aaaaagaaaa caaaagctat caaacagttc cgcccaacac 2941 ttagcatcga ttttgaaaat caacaaaatg aagaggaaga ttatttttta ataaataatt 3001 ttaaagaaac aacaaaagcg cggaagagaa agctaccaac aacaccaaca ataaaacaac 3061 aacaacaaca gcgacaacaa gagaagacca attaagtaaa tatacaacaa ctgcaacgac 3121 agccagcatt caacaacaac agcaatcaca acaacaacag cttgaaggcc cacaacaaac 3181 aaatacacac acaggcccat caacatgcat atatactata tacattatat atctaattgt 3241 actactttat agtaaagcct agagaagaag agaaaaacac caagatgaat agcacactta 3301 aatgtaaaac aggaagaaaa aaaaacaaaa ccaaaatgcg ctgttgaaac agaaaccacc 3361 aatgggtaac gctttataag tatatatata tatctctaaa tatatataca tatatatata 3421 tatctaaaac ttagaagaag aagattataa attagaaacg tatgtaaaag caggatttcc 3481 aaaattctcg tggcaaagaa aaaactaaag ctaaaacgaa aaaagataga tgtctctttt 3541 cttgaccaaa aatactgagc cagaaataat aatttctttt ggatatactt tcttcttctt 3601 tcaaaagcga gaccacaaag caaaacaaaa acaaaaagaa cacataaacg aagcaaaaat 3661 caaatcaata gaattatatc aaattagagt gcttgtatgt caagtatgtg tgagtttgca 3721 gacagaaaat taaccaatag tatgtaaaac taaggagaaa agctggcgag agagtgttgt 3781 atctgtgtaa tgcccattta aattagatat taatgtagca agcaaacaaa aaatcgtagc 3841 aaaaatgtgt aatagtgcaa taagctaaca aaagccacac ccaccccctc ccttcttcct 3901 ccttcatcct gcaacctccc cccatttaac aaaatttttt agagaatttt tattttgatc 3961 ttgttctgga aagacacgca tataagacat tatcatataa tataatatgt agtgattgcg 4021 tagaaccaca ccttctcttg caatttaaat tcctgcctta atgccattga aacggaatac 4081 ggaatcaaag taacagcaga acagcaaatg tccccaaaat ttgatacacc ctcaaacaac 4141 taaagcttat aacaacattt atatacaagg aaaggtaaaa catgaaaaaa agaaagaaaa 4201 cgaaaatagc ttagaaatag acaacacaat tatcacgata agcaaaaaga gaaaaaatct 4261 agcaaaaaac ggcaacataa aactgaatgt tatattttgg agcatttttt caatgtgtat 4321 gtgttagcat atatattaca tatatatatc tagagagaaa gcgaaggagc aggattgata 4381 aaagtattag caaaagatat ctcttgaaca ataatgaagg acagacagag atggagagag 4441 caggtcgtct ctttctactc cccttaaata tttgcaagtt ttttaggtcg gggcaatgaa 4501 tataaaacta tatatcatct atctatatat atttgtatac acaaactaaa ttgagcaggt 4561 cagatagcgt gaattttcca tatattttgt aaatacttta aaaacaagtg ggaaactgtc 4621 gagctttgag ttcttttcat cacggggggc ttattttgtt ttgataatgt ttttttttta 4681 ccaaagggac agcaaatcaa aaattatttt cacacaagaa agttttacac gaaaggaaag 4741 agcaagcaag taatcataaa aatcgaaatc tttaaactag aaatatatat atgtgtatgg 4801 aacgtctgtg taaatgtgtt tgaatgtaaa atgctttagt cacataagtt gaaagagaaa 4861 tttgaattaa ctaaatagtt atatatgcct gtgtctgtca ctcgatttct gttactaatc 4921 ataaaataaa ttgtataaaa ataataatac caacacacgt ttgaagaatt aacattaact 4981 cttcaattag ctcttatgtt ctttaattta tgtttttttt tacgttgtat taactgaaaa 5041 acactttttg aaaatgtttt ttcttgattt ttgtaaccat cctttgtaag taggcaagta 5101 acaaatgatt gaacataata cttttttgcg tactttttat taaaaaaaaa tcaaacaagg 5161 aaaacagcaa acaacagaac gatttcattt tagaaattta agcttaactt aactaattat 5221 taatgtttaa acaaatttgt tctttaagtt gaaaacaaat cgggagtatt gcaaattata 5281 attatcttta aatatacaca acaaaaaaac aacaaaacaa aggagaaaac tcaacaaaaa 5341 aattatattt atagaaaaag cagacaacaa caaaaacaag aaaagattat aacaaaaaac 5401 aa