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LOCUS XM_017138088 5961 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017138088 VERSION XM_017138088.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138088.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5961 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5961 /gene="Mnt" /note="Mnt; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108054957" CDS 708..3170 /gene="Mnt" /codon_start=1 /product="streptococcal hemagglutinin isoform X1" /protein_id="XP_016993577.2" /db_xref="GeneID:108054957" /translation="MSNIGGINTLLRAAEFIEKLNEVPQAGSGGAGALGVGVGVALPQ QQSLLGKSISIINNNNSSQHNRNSSSSSNGIIATPPFTNGNCNGFVGIGNVNVNVNVN ANGNGLSNGHSSPRSQLAAAAHDYELAAVVGSAVANGHSEGRPLISEDDNSSVNSKNK NKNNTHSPQQQQQQQQQHDAARIGAALAIAIAAETAAAQRLTATNTTATSSPTTTPAI STPSPASSAVMVLAAAAAATTATPATPATAATPATSNPAKHKLGPFASIPPKFLLVSD GKEVYPKASASSASNASDSLDSFRYNPNSGERIRKIMQNMQNMQHIEQQFHSLRPAVI PLTPPPTSTRKVDTSISRIRSYSLSNAFSAPRDQSADHPQQHLQFQHNLSYVRSANGG VVYGLPADSVDSSAAAGSVAMNIASSAPAAGSQLTAHHHTGHGGRRRTTSSNSNGAGT REVHNKLEKERRAQLKECYDLLKKELPMRDEDRKKTSNLTILDTAHKFVKQLTQRDRE QEAEVERLAKQKIELQKRLKRLGLRRETPPTDQQSIPQAIKAICVATTTAPVPPTAAS GRNGTTILFDAGNACATGQLTTVINKSNATPASGAGATAAANGSISSKHNGNHTGGAA TTLTPAMGIMTIKNGNGNGNGNILAISPTAIQQQHHHNGSPAGSPSAIGGATSGATIT RGSPTPSTPSPSPSSSSSGVSSSASFMGGGSSSSSSSSSSSSSSSSSSSSSSTSSSSS SPTQQQLIATPTATAHLVGARNVGLKFHGGAGGAASALNGGATIVAAAVPTGGGSANG FHQADKDRNYNFLMLSAGTTAQ" misc_feature 2052..2288 /gene="Mnt" /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-binding protein Mnt and similar proteins; Region: bHLHzip_Mnt; cd11402" /db_xref="CDD:381408" misc_feature order(2067..2072,2079..2084,2088..2093,2103..2105, 2163..2171) /gene="Mnt" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:381408" misc_feature order(2100..2105,2109..2126,2130..2135,2172..2174, 2181..2183,2193..2195,2199..2207,2211..2216,2220..2225, 2232..2234,2244..2246,2253..2258,2262..2267,2274..2279, 2283..2288) /gene="Mnt" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:381408" misc_feature order(2100..2102,2109..2114,2118..2123,2130..2135, 2172..2174,2181..2183,2193..2195,2199..2207,2211..2216, 2220..2225,2232..2234,2244..2246,2253..2258,2262..2267, 2274..2279,2283..2288) /gene="Mnt" /note="putative tetramer interface [polypeptide binding]; other site" /db_xref="CDD:381408" polyA_site 5961 /gene="Mnt" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcagacgtc acactctaaa agttgcgtca gttcaaaaaa gtttttttta acaattatta 61 gaaaaaagga aaaataaata ccacatattt ttttcaagtt ttcaaccaag tttgatcaaa 121 gcgcatggca aaagtttata aacccaatct actaaaaaca aacaccaaaa tcaaaactgc 181 aaccatatat aaacaacaac agcaagcaag aaccaccgaa aaatcaacaa catcaaaagt 241 ggcagaaaac tcaccaagtt caacaataat attcaacaac cagctaaatt gtaaaacaag 301 aaaccaccat cagcaaccaa taatttcaac aaccaatcgt caataaaagc cacacacacc 361 aacaattttc aacaacaata ttttcaacaa ttttcaagta cttttaacaa caatttccaa 421 gaatattttt tgaaaaaaca aaagtagaaa agttttaaac aacaatagta tccaaaagaa 481 gttaaacaac aatttccaca ataactgtaa acgtgtcgcg acttaaagct gctgcctctt 541 ctgtccctct ctctcgcgtg tattcgtcct gttcagtgtt ggtgtacgag aatcgtgttt 601 tgtttttttt gtcaaactta tatatccatt tcttgtatta cgcgttcgtc gtccttgtta 661 cgtgtgtgtg tgtgcgagaa gagggagtgc gctagtttgt gtatgctatg tcaaatatcg 721 ggggcattaa tacgctcctc cgggcggctg aatttatcga gaagctgaat gaggtcccgc 781 aggcgggaag cggtggcgcc ggcgcacttg gagtcggcgt gggcgtggca ctgccccaac 841 agcagtcgct gctgggcaag agcatctcca ttatcaacaa caacaatagc agccagcaca 901 atagaaatag cagcagtagc agtaacggga ttattgcaac gccaccgttc acgaacggaa 961 attgcaacgg tttcgtcggc atcggtaacg tgaacgtaaa cgttaacgtc aatgcgaacg 1021 ggaacggtct gagcaacggt cacagcagtc cgcgcagtca attagccgcc gctgcccacg 1081 attatgagct tgccgccgtc gttggcagcg cagtcgccaa cggacacagc gaaggtcgcc 1141 ccctcatctc ggaggatgat aattcctcag tcaacagcaa gaacaagaac aagaacaaca 1201 cccactcccc acagcagcaa caacaacagc aacaacagca tgatgcggca agaataggag 1261 cagcattggc aatagcaata gctgccgaaa cagcggcggc acagaggcta acagccacca 1321 acaccaccgc cacctcctcc cccacaacca cccccgcaat tagcaccccc tcgcccgcct 1381 cctctgccgt catggtgctg gcagcagcag cagcagccac tacggcaaca cctgcaacac 1441 ctgcaacagc agcaacacct gcaacatcca atcctgccaa gcacaaattg ggccccttcg 1501 cctcgatacc gcccaaattt ctattggttt cggatggcaa ggaggtctat ccaaaggcct 1561 cggcctccag tgcctccaat gcctccgatt cgctggattc gtttcgctac aatcccaatt 1621 ccggggagag gatcagaaag ataatgcaga atatgcagaa catgcagcat atcgagcagc 1681 aattccatag tctgcgaccg gcggtcattc ccctaacacc accgcccaca tccacccgaa 1741 aagtggacac cagcatctcg cggattcgct cctactcact gtccaatgcc ttttcagcac 1801 cccgagatca gtcggcggat catccgcagc agcatctgca attccaacac aatctcagct 1861 atgtgagaag cgccaacggt ggtgttgtct atggcctgcc agcggattcg gttgactcct 1921 ctgcagccgc cggatcggtg gccatgaaca ttgcctcctc ggcgccagcg gcaggatctc 1981 agctgacggc gcaccatcac acgggacacg gcggacgcag gcgcaccacc agttccaaca 2041 gcaatggagc gggcactcgg gaagtgcaca acaagctgga aaaggagcga cgcgcccagc 2101 tgaaggagtg ctacgacctg ctcaaaaagg agctgcccat gcgggacgag gaccgaaaga 2161 agacctccaa tttgacaata ctcgatacgg cccacaaatt tgtcaagcaa ttgacgcagc 2221 gtgatcgcga gcaggaggcg gaggtggaga ggctggcgaa gcagaagatt gagctgcaga 2281 agcggctgaa gcgattgggt ttgaggaggg aaacgccgcc caccgatcag caaagcattc 2341 cacaggccat caaagccatt tgcgtggcaa caaccaccgc accagtacca ccaacggcgg 2401 ccagtggtcg caatggaacc acaattctat tcgacgcagg caacgcctgt gccactgggc 2461 agctaacaac tgtgataaac aaatcaaatg ccacaccagc atcaggagca ggagcaaccg 2521 cagcagccaa cggcagcatt agcagcaaac acaatggcaa ccacacagga ggagcagcaa 2581 ccacactgac tccggccatg ggtatcatga caattaagaa cggcaatggc aacggcaacg 2641 gcaacatact ggcaatctca ccaacggcaa tccagcagca gcaccatcac aacggcagcc 2701 cagcgggcag tccatcggca attggaggag caactagtgg agccaccatt acacgtggct 2761 cgcccacgcc atcgactcca tcgccgtcgc ccagctcctc gtccagtggc gtctcgtcgt 2821 cggcctcgtt tatgggcggc ggctcctcct cgtcgtcctc ctcctcatca tcctcctcgt 2881 cgtcgtcctc ctcgtcgtcg tcatccagta cgtcgtccag ttcgtcgtcg cccacgcaac 2941 agcagctgat cgccacgccc acggccaccg cccatttggt gggcgcccgc aatgttggcc 3001 tgaaattcca cggcggtgcg ggtggtgcgg ccagcgcctt gaatggcggt gccaccattg 3061 tggccgctgc agtgccaact ggcggcggat cagcgaatgg tttccatcag gcggacaagg 3121 accgcaatta caatttcctg atgctcagtg ctgggacaac ggcgcagtaa accaacaaac 3181 aagaaacaac aacaacaaca tcaaacgaac acctacaaca ataatgaaaa caacaacaac 3241 aactgaattg tgtgcaacag ctcccacctt ataaaagaaa aaatgtaaca acaactagaa 3301 gaaggttctc tgaaaactct tttttcttac aacaagatac aaacaaatat tatgtatttt 3361 tcacactttc gcacacattg aaaacaacaa caacagcagc agcagcagca gcagcagcaa 3421 aaagaaaata acaaagctgt aattttttat gtaaaacaaa aaaagaaaac aaaagctatc 3481 aaacagttcc gcccaacact tagcatcgat tttgaaaatc aacaaaatga agaggaagat 3541 tattttttaa taaataattt taaagaaaca acaaaagcgc ggaagagaaa gctaccaaca 3601 acaccaacaa taaaacaaca acaacaacag cgacaacaag agaagaccaa ttaagtaaat 3661 atacaacaac tgcaacgaca gccagcattc aacaacaaca gcaatcacaa caacaacagc 3721 ttgaaggccc acaacaaaca aatacacaca caggcccatc aacatgcata tatactatat 3781 acattatata tctaattgta ctactttata gtaaagccta gagaagaaga gaaaaacacc 3841 aagatgaata gcacacttaa atgtaaaaca ggaagaaaaa aaaacaaaac caaaatgcgc 3901 tgttgaaaca gaaaccacca atgggtaacg ctttataagt atatatatat atctctaaat 3961 atatatacat atatatatat atctaaaact tagaagaaga agattataaa ttagaaacgt 4021 atgtaaaagc aggatttcca aaattctcgt ggcaaagaaa aaactaaagc taaaacgaaa 4081 aaagatagat gtctcttttc ttgaccaaaa atactgagcc agaaataata atttcttttg 4141 gatatacttt cttcttcttt caaaagcgag accacaaagc aaaacaaaaa caaaaagaac 4201 acataaacga agcaaaaatc aaatcaatag aattatatca aattagagtg cttgtatgtc 4261 aagtatgtgt gagtttgcag acagaaaatt aaccaatagt atgtaaaact aaggagaaaa 4321 gctggcgaga gagtgttgta tctgtgtaat gcccatttaa attagatatt aatgtagcaa 4381 gcaaacaaaa aatcgtagca aaaatgtgta atagtgcaat aagctaacaa aagccacacc 4441 caccccctcc cttcttcctc cttcatcctg caacctcccc ccatttaaca aaatttttta 4501 gagaattttt attttgatct tgttctggaa agacacgcat ataagacatt atcatataat 4561 ataatatgta gtgattgcgt agaaccacac cttctcttgc aatttaaatt cctgccttaa 4621 tgccattgaa acggaatacg gaatcaaagt aacagcagaa cagcaaatgt ccccaaaatt 4681 tgatacaccc tcaaacaact aaagcttata acaacattta tatacaagga aaggtaaaac 4741 atgaaaaaaa gaaagaaaac gaaaatagct tagaaataga caacacaatt atcacgataa 4801 gcaaaaagag aaaaaatcta gcaaaaaacg gcaacataaa actgaatgtt atattttgga 4861 gcattttttc aatgtgtatg tgttagcata tatattacat atatatatct agagagaaag 4921 cgaaggagca ggattgataa aagtattagc aaaagatatc tcttgaacaa taatgaagga 4981 cagacagaga tggagagagc aggtcgtctc tttctactcc ccttaaatat ttgcaagttt 5041 tttaggtcgg ggcaatgaat ataaaactat atatcatcta tctatatata tttgtataca 5101 caaactaaat tgagcaggtc agatagcgtg aattttccat atattttgta aatactttaa 5161 aaacaagtgg gaaactgtcg agctttgagt tcttttcatc acggggggct tattttgttt 5221 tgataatgtt ttttttttac caaagggaca gcaaatcaaa aattattttc acacaagaaa 5281 gttttacacg aaaggaaaga gcaagcaagt aatcataaaa atcgaaatct ttaaactaga 5341 aatatatata tgtgtatgga acgtctgtgt aaatgtgttt gaatgtaaaa tgctttagtc 5401 acataagttg aaagagaaat ttgaattaac taaatagtta tatatgcctg tgtctgtcac 5461 tcgatttctg ttactaatca taaaataaat tgtataaaaa taataatacc aacacacgtt 5521 tgaagaatta acattaactc ttcaattagc tcttatgttc tttaatttat gttttttttt 5581 acgttgtatt aactgaaaaa cactttttga aaatgttttt tcttgatttt tgtaaccatc 5641 ctttgtaagt aggcaagtaa caaatgattg aacataatac ttttttgcgt actttttatt 5701 aaaaaaaaat caaacaagga aaacagcaaa caacagaacg atttcatttt agaaatttaa 5761 gcttaactta actaattatt aatgtttaaa caaatttgtt ctttaagttg aaaacaaatc 5821 gggagtattg caaattataa ttatctttaa atatacacaa caaaaaaaca acaaaacaaa 5881 ggagaaaact caacaaaaaa attatattta tagaaaaagc agacaacaac aaaaacaaga 5941 aaagattata acaaaaaaca a