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LOCUS XM_017138087 6048 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017138087 VERSION XM_017138087.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138087.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6048 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6048 /gene="Mnt" /note="Mnt; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108054957" CDS 795..3257 /gene="Mnt" /codon_start=1 /product="streptococcal hemagglutinin isoform X1" /protein_id="XP_016993576.2" /db_xref="GeneID:108054957" /translation="MSNIGGINTLLRAAEFIEKLNEVPQAGSGGAGALGVGVGVALPQ QQSLLGKSISIINNNNSSQHNRNSSSSSNGIIATPPFTNGNCNGFVGIGNVNVNVNVN ANGNGLSNGHSSPRSQLAAAAHDYELAAVVGSAVANGHSEGRPLISEDDNSSVNSKNK NKNNTHSPQQQQQQQQQHDAARIGAALAIAIAAETAAAQRLTATNTTATSSPTTTPAI STPSPASSAVMVLAAAAAATTATPATPATAATPATSNPAKHKLGPFASIPPKFLLVSD GKEVYPKASASSASNASDSLDSFRYNPNSGERIRKIMQNMQNMQHIEQQFHSLRPAVI PLTPPPTSTRKVDTSISRIRSYSLSNAFSAPRDQSADHPQQHLQFQHNLSYVRSANGG VVYGLPADSVDSSAAAGSVAMNIASSAPAAGSQLTAHHHTGHGGRRRTTSSNSNGAGT REVHNKLEKERRAQLKECYDLLKKELPMRDEDRKKTSNLTILDTAHKFVKQLTQRDRE QEAEVERLAKQKIELQKRLKRLGLRRETPPTDQQSIPQAIKAICVATTTAPVPPTAAS GRNGTTILFDAGNACATGQLTTVINKSNATPASGAGATAAANGSISSKHNGNHTGGAA TTLTPAMGIMTIKNGNGNGNGNILAISPTAIQQQHHHNGSPAGSPSAIGGATSGATIT RGSPTPSTPSPSPSSSSSGVSSSASFMGGGSSSSSSSSSSSSSSSSSSSSSSTSSSSS SPTQQQLIATPTATAHLVGARNVGLKFHGGAGGAASALNGGATIVAAAVPTGGGSANG FHQADKDRNYNFLMLSAGTTAQ" misc_feature 2139..2375 /gene="Mnt" /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain found in Max-binding protein Mnt and similar proteins; Region: bHLHzip_Mnt; cd11402" /db_xref="CDD:381408" misc_feature order(2154..2159,2166..2171,2175..2180,2190..2192, 2250..2258) /gene="Mnt" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:381408" misc_feature order(2187..2192,2196..2213,2217..2222,2259..2261, 2268..2270,2280..2282,2286..2294,2298..2303,2307..2312, 2319..2321,2331..2333,2340..2345,2349..2354,2361..2366, 2370..2375) /gene="Mnt" /note="putative dimer interface [polypeptide binding]; other site" /db_xref="CDD:381408" misc_feature order(2187..2189,2196..2201,2205..2210,2217..2222, 2259..2261,2268..2270,2280..2282,2286..2294,2298..2303, 2307..2312,2319..2321,2331..2333,2340..2345,2349..2354, 2361..2366,2370..2375) /gene="Mnt" /note="putative tetramer interface [polypeptide binding]; other site" /db_xref="CDD:381408" polyA_site 6048 /gene="Mnt" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttgcttctg tcattgcatt cggcgggtag gatcaagaaa aagaaacaag aaacaccaaa 61 accaaaaaca caagaaccga aaccgaaaca gacaacacac aaaaattaac aacaaatcga 121 aaaaaacagc ctttattttt ttcacgttta agtgcaacca cacaaagaat aagaagccaa 181 accagaagta gaagaagaag gagcagcaga gtgcttaata attctaacgc ccaatctact 241 aaaaacaaac accaaaatca aaactgcaac catatataaa caacaacagc aagcaagaac 301 caccgaaaaa tcaacaacat caaaagtggc agaaaactca ccaagttcaa caataatatt 361 caacaaccag ctaaattgta aaacaagaaa ccaccatcag caaccaataa tttcaacaac 421 caatcgtcaa taaaagccac acacaccaac aattttcaac aacaatattt tcaacaattt 481 tcaagtactt ttaacaacaa tttccaagaa tattttttga aaaaacaaaa gtagaaaagt 541 tttaaacaac aatagtatcc aaaagaagtt aaacaacaat ttccacaata actgtaaacg 601 tgtcgcgact taaagctgct gcctcttctg tccctctctc tcgcgtgtat tcgtcctgtt 661 cagtgttggt gtacgagaat cgtgttttgt tttttttgtc aaacttatat atccatttct 721 tgtattacgc gttcgtcgtc cttgttacgt gtgtgtgtgt gcgagaagag ggagtgcgct 781 agtttgtgta tgctatgtca aatatcgggg gcattaatac gctcctccgg gcggctgaat 841 ttatcgagaa gctgaatgag gtcccgcagg cgggaagcgg tggcgccggc gcacttggag 901 tcggcgtggg cgtggcactg ccccaacagc agtcgctgct gggcaagagc atctccatta 961 tcaacaacaa caatagcagc cagcacaata gaaatagcag cagtagcagt aacgggatta 1021 ttgcaacgcc accgttcacg aacggaaatt gcaacggttt cgtcggcatc ggtaacgtga 1081 acgtaaacgt taacgtcaat gcgaacggga acggtctgag caacggtcac agcagtccgc 1141 gcagtcaatt agccgccgct gcccacgatt atgagcttgc cgccgtcgtt ggcagcgcag 1201 tcgccaacgg acacagcgaa ggtcgccccc tcatctcgga ggatgataat tcctcagtca 1261 acagcaagaa caagaacaag aacaacaccc actccccaca gcagcaacaa caacagcaac 1321 aacagcatga tgcggcaaga ataggagcag cattggcaat agcaatagct gccgaaacag 1381 cggcggcaca gaggctaaca gccaccaaca ccaccgccac ctcctccccc acaaccaccc 1441 ccgcaattag caccccctcg cccgcctcct ctgccgtcat ggtgctggca gcagcagcag 1501 cagccactac ggcaacacct gcaacacctg caacagcagc aacacctgca acatccaatc 1561 ctgccaagca caaattgggc cccttcgcct cgataccgcc caaatttcta ttggtttcgg 1621 atggcaagga ggtctatcca aaggcctcgg cctccagtgc ctccaatgcc tccgattcgc 1681 tggattcgtt tcgctacaat cccaattccg gggagaggat cagaaagata atgcagaata 1741 tgcagaacat gcagcatatc gagcagcaat tccatagtct gcgaccggcg gtcattcccc 1801 taacaccacc gcccacatcc acccgaaaag tggacaccag catctcgcgg attcgctcct 1861 actcactgtc caatgccttt tcagcacccc gagatcagtc ggcggatcat ccgcagcagc 1921 atctgcaatt ccaacacaat ctcagctatg tgagaagcgc caacggtggt gttgtctatg 1981 gcctgccagc ggattcggtt gactcctctg cagccgccgg atcggtggcc atgaacattg 2041 cctcctcggc gccagcggca ggatctcagc tgacggcgca ccatcacacg ggacacggcg 2101 gacgcaggcg caccaccagt tccaacagca atggagcggg cactcgggaa gtgcacaaca 2161 agctggaaaa ggagcgacgc gcccagctga aggagtgcta cgacctgctc aaaaaggagc 2221 tgcccatgcg ggacgaggac cgaaagaaga cctccaattt gacaatactc gatacggccc 2281 acaaatttgt caagcaattg acgcagcgtg atcgcgagca ggaggcggag gtggagaggc 2341 tggcgaagca gaagattgag ctgcagaagc ggctgaagcg attgggtttg aggagggaaa 2401 cgccgcccac cgatcagcaa agcattccac aggccatcaa agccatttgc gtggcaacaa 2461 ccaccgcacc agtaccacca acggcggcca gtggtcgcaa tggaaccaca attctattcg 2521 acgcaggcaa cgcctgtgcc actgggcagc taacaactgt gataaacaaa tcaaatgcca 2581 caccagcatc aggagcagga gcaaccgcag cagccaacgg cagcattagc agcaaacaca 2641 atggcaacca cacaggagga gcagcaacca cactgactcc ggccatgggt atcatgacaa 2701 ttaagaacgg caatggcaac ggcaacggca acatactggc aatctcacca acggcaatcc 2761 agcagcagca ccatcacaac ggcagcccag cgggcagtcc atcggcaatt ggaggagcaa 2821 ctagtggagc caccattaca cgtggctcgc ccacgccatc gactccatcg ccgtcgccca 2881 gctcctcgtc cagtggcgtc tcgtcgtcgg cctcgtttat gggcggcggc tcctcctcgt 2941 cgtcctcctc ctcatcatcc tcctcgtcgt cgtcctcctc gtcgtcgtca tccagtacgt 3001 cgtccagttc gtcgtcgccc acgcaacagc agctgatcgc cacgcccacg gccaccgccc 3061 atttggtggg cgcccgcaat gttggcctga aattccacgg cggtgcgggt ggtgcggcca 3121 gcgccttgaa tggcggtgcc accattgtgg ccgctgcagt gccaactggc ggcggatcag 3181 cgaatggttt ccatcaggcg gacaaggacc gcaattacaa tttcctgatg ctcagtgctg 3241 ggacaacggc gcagtaaacc aacaaacaag aaacaacaac aacaacatca aacgaacacc 3301 tacaacaata atgaaaacaa caacaacaac tgaattgtgt gcaacagctc ccaccttata 3361 aaagaaaaaa tgtaacaaca actagaagaa ggttctctga aaactctttt ttcttacaac 3421 aagatacaaa caaatattat gtatttttca cactttcgca cacattgaaa acaacaacaa 3481 cagcagcagc agcagcagca gcagcaaaaa gaaaataaca aagctgtaat tttttatgta 3541 aaacaaaaaa agaaaacaaa agctatcaaa cagttccgcc caacacttag catcgatttt 3601 gaaaatcaac aaaatgaaga ggaagattat tttttaataa ataattttaa agaaacaaca 3661 aaagcgcgga agagaaagct accaacaaca ccaacaataa aacaacaaca acaacagcga 3721 caacaagaga agaccaatta agtaaatata caacaactgc aacgacagcc agcattcaac 3781 aacaacagca atcacaacaa caacagcttg aaggcccaca acaaacaaat acacacacag 3841 gcccatcaac atgcatatat actatataca ttatatatct aattgtacta ctttatagta 3901 aagcctagag aagaagagaa aaacaccaag atgaatagca cacttaaatg taaaacagga 3961 agaaaaaaaa acaaaaccaa aatgcgctgt tgaaacagaa accaccaatg ggtaacgctt 4021 tataagtata tatatatatc tctaaatata tatacatata tatatatatc taaaacttag 4081 aagaagaaga ttataaatta gaaacgtatg taaaagcagg atttccaaaa ttctcgtggc 4141 aaagaaaaaa ctaaagctaa aacgaaaaaa gatagatgtc tcttttcttg accaaaaata 4201 ctgagccaga aataataatt tcttttggat atactttctt cttctttcaa aagcgagacc 4261 acaaagcaaa acaaaaacaa aaagaacaca taaacgaagc aaaaatcaaa tcaatagaat 4321 tatatcaaat tagagtgctt gtatgtcaag tatgtgtgag tttgcagaca gaaaattaac 4381 caatagtatg taaaactaag gagaaaagct ggcgagagag tgttgtatct gtgtaatgcc 4441 catttaaatt agatattaat gtagcaagca aacaaaaaat cgtagcaaaa atgtgtaata 4501 gtgcaataag ctaacaaaag ccacacccac cccctccctt cttcctcctt catcctgcaa 4561 cctcccccca tttaacaaaa ttttttagag aatttttatt ttgatcttgt tctggaaaga 4621 cacgcatata agacattatc atataatata atatgtagtg attgcgtaga accacacctt 4681 ctcttgcaat ttaaattcct gccttaatgc cattgaaacg gaatacggaa tcaaagtaac 4741 agcagaacag caaatgtccc caaaatttga tacaccctca aacaactaaa gcttataaca 4801 acatttatat acaaggaaag gtaaaacatg aaaaaaagaa agaaaacgaa aatagcttag 4861 aaatagacaa cacaattatc acgataagca aaaagagaaa aaatctagca aaaaacggca 4921 acataaaact gaatgttata ttttggagca ttttttcaat gtgtatgtgt tagcatatat 4981 attacatata tatatctaga gagaaagcga aggagcagga ttgataaaag tattagcaaa 5041 agatatctct tgaacaataa tgaaggacag acagagatgg agagagcagg tcgtctcttt 5101 ctactcccct taaatatttg caagtttttt aggtcggggc aatgaatata aaactatata 5161 tcatctatct atatatattt gtatacacaa actaaattga gcaggtcaga tagcgtgaat 5221 tttccatata ttttgtaaat actttaaaaa caagtgggaa actgtcgagc tttgagttct 5281 tttcatcacg gggggcttat tttgttttga taatgttttt tttttaccaa agggacagca 5341 aatcaaaaat tattttcaca caagaaagtt ttacacgaaa ggaaagagca agcaagtaat 5401 cataaaaatc gaaatcttta aactagaaat atatatatgt gtatggaacg tctgtgtaaa 5461 tgtgtttgaa tgtaaaatgc tttagtcaca taagttgaaa gagaaatttg aattaactaa 5521 atagttatat atgcctgtgt ctgtcactcg atttctgtta ctaatcataa aataaattgt 5581 ataaaaataa taataccaac acacgtttga agaattaaca ttaactcttc aattagctct 5641 tatgttcttt aatttatgtt tttttttacg ttgtattaac tgaaaaacac tttttgaaaa 5701 tgttttttct tgatttttgt aaccatcctt tgtaagtagg caagtaacaa atgattgaac 5761 ataatacttt tttgcgtact ttttattaaa aaaaaatcaa acaaggaaaa cagcaaacaa 5821 cagaacgatt tcattttaga aatttaagct taacttaact aattattaat gtttaaacaa 5881 atttgttctt taagttgaaa acaaatcggg agtattgcaa attataatta tctttaaata 5941 tacacaacaa aaaaacaaca aaacaaagga gaaaactcaa caaaaaaatt atatttatag 6001 aaaaagcaga caacaacaaa aacaagaaaa gattataaca aaaaacaa