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LOCUS XM_017138080 7606 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017138080 VERSION XM_017138080.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138080.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7606 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7606 /gene="Tlk" /note="Tousled-like kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108054955" CDS 578..5239 /gene="Tlk" /codon_start=1 /product="uncharacterized protein Tlk isoform X1" /protein_id="XP_016993569.2" /db_xref="GeneID:108054955" /translation="MSCTPSPLCAAFALAMHQQQQQQQLEIQEIQQQRQHLQIQQIHI QQQQIRRIEELNLNPQNHQQHIQKISHLLPQHNQHQIQNSHGLLQVQQIPETHKLHII QQTQPPQQQCYQIQQVPIQQRQIFDFQQINEIPHMQTIQITLQSQQKIPETQPIQQQQ PEQLHQSQRLPKIPEIPQIPEILQIQQFQVAQQQQKQTKKRGAKSTATTTITSHNSNS NSNNSSSNSNNYYNINNNNSSNSGGHIMLASASASAAARKRSRSASNGSKSSKAVSGR KLTKSMSAGAQLQMAPQTTSALSHHHPNQQQQLQPPQQQQAQPPPPQQQQHFANHHSA QQQSQQQQEQQNPQQAQQQQAQQQQILPQPHLQHLHKHPHQLQLHQQQQQLHQQQQHF HQQQQQSLQGLHQGSSNPDSNMSTGSSHSEKDVNDMLSGGGAAPGVAAAAAIQQQHPA FAPALGMQQPPPPPPQHSNNGGEMGYLTAGTTTTASVTAVGKPRTPAERKRKRKMPQT SADEAGSGGGSGGAGAAVVNNSSLKGKSLAFRDMPKVNMSLNLGDRLGGSAGSGGGAG GAGSGGSGAGSGSGSGGGKSARIMLPVSDNKKINDYFNKQQTGVGVGVPGGGGAGGNT AGLRGSHTGGGSKSPSSAQQQQQTTQQQQQQASGVATGGGAGGAAANQQVQVQTSSAY ALYPPASPQTQTPQQQQQQQPGADFHYVNSSKAQQQQQQQQQRQQQQTSNQMVPPHVV VGLGGHPLSLASIQQQQQTPLSQQQQQQQQQQQQQQQQLGPPTTSTASVVSTHPHQLG SLGVVGMVGVGVGVGVNVGVGPPLPPPPPMAMPAAIITYSKATQTEVSLHELQEREAE HESGKVKLDEMTRLSDEQKCQIVGNQKTIDQHKSHIAKCIDVVKKLLKEKSSIEKKEA RQKCMQNRLRLGQFVTQRVGATFQENWTDGYAFQELSRRQEEITAEREEIDRQKKQLM KKRPAESGRKRNNNSNQNNQQQQQQQQHQQQQQQQNSNSNDSSQLTGGVVTGPGSDRL GGAAGGVSVDSGLGGNNAGAIGGGAVGGGVGGGGVGSGGVGGVGGGGGRGLSRSNSTQ ANQAQLLHNGGGGSGGNVGNSGGVGDRLSDRGGGGGLGGNDSGSCSDSGTFLKPDPVS GAYTAQEYYEYDEILKLRQNALKKEDADLQLEMEKLERERNLHIRELKRILNEDQSRF NNHPVLNDRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIKH ALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQHKTIPEREAR SIIMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEIKITDFGLSKVMDDENYN PDHGMDLTSQGAGTYWYLPPECFVVGKNPPKISSKVDVWSVGVIFYQCLYGKKPFGHN QSQATILEENTILKATEVQFSNKPTVSNEAKSFIRGCLAYRKEDRMDVFALARHEYIQ PPIPKHGRGSLNQQQQAQQQQQQQQQQQQQQSSTSQANSTGQTSFSAHMFGNMNQSSS S" misc_feature <3092..>3502 /gene="Tlk" /note="Family of unknown function (DUF5401); Region: DUF5401; pfam17380" /db_xref="CDD:375164" misc_feature 4250..5053 /gene="Tlk" /note="Catalytic domain of the Serine/Threonine kinase, Tousled-Like Kinase; Region: STKc_TLK; cd13990" /db_xref="CDD:270892" misc_feature order(4259..4261,4298..4300,4304..4306,4412..4414, 4463..4474,4484..4486,4490..4492,4607..4609,4613..4615, 4619..4624,4628..4630,4670..4672,4679..4681,4748..4759) /gene="Tlk" /note="active site" /db_xref="CDD:270892" misc_feature order(4484..4486,4490..4492,4607..4609,4613..4615, 4619..4621,4679..4681,4748..4759) /gene="Tlk" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270892" misc_feature order(4667..4705,4718..4759) /gene="Tlk" /note="activation loop (A-loop); other site" /db_xref="CDD:270892" polyA_site 7606 /gene="Tlk" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cggcatttcg agtgcagacg cggtcggtgt cgttttggtt ttgtcggcgg ttgctaaaca 61 caatttaagt tcactcggtt agcagacatt acacactgcc cacatataaa cacataaata 121 tatatatgta cataaggtgt gtgtatgcaa gaaaccagaa aaaacaacaa cgttcgttga 181 gtcgcgttcg gttttattat ttttttgtgt ttttcgtgtg tgtggtgtgt gctttggatt 241 tgccaatttt agccgactgg ctctcagtgt cgaacttaaa cttaaagagc gagcaacgtg 301 acgtgtcgcg tcgtgtcgct aaaaattcgc gcacacaact tcctactaca acaaaaaaaa 361 gaaacaaaaa taaaacgtgt aagaaaaaag tgagacttgt tttttttctt gtgcatctct 421 gtgtgagttt gtgagtgtgc gaaaacacaa agaaaaacgg ggagagaggg agagccgcga 481 agagagtgag agagcaagag cagctgattt tagccggcaa gtgtcagctg tttcgcgcca 541 gagcgagata gcgctagttc ggcggggcga acatgttatg tcttgcacgc cgtctcctct 601 ttgtgctgca ttcgctttag caatgcacca acaacagcag caacaacaac tggaaataca 661 agaaatacaa cagcaaaggc aacatttgca aatacagcaa atacacatac agcaacaaca 721 aattagaagg atcgaggagc taaacctaaa cccccaaaac catcagcagc acatacaaaa 781 aatttcgcat ttactacccc aacataacca acatcaaatt caaaatagcc atggcttact 841 acaagttcag caaataccag aaacacacaa gttacatata atacaacaaa cacaaccacc 901 acaacaacaa tgttatcaaa tacaacaagt accgattcaa caacggcaaa tatttgattt 961 tcagcaaatc aatgaaatac cgcatatgca aaccatacaa ataactttgc aaagtcagca 1021 aaaaataccg gaaacacagc cgatacaaca acaacagcca gagcagcttc atcaaagtca 1081 acgcttgccg aaaataccag aaataccgca aataccagaa atactccaaa tacagcaatt 1141 tcaagtagcg caacagcaac aaaagcaaac gaaaaagcga ggtgcaaaat caacggcaac 1201 aacaacaata acatcgcata acagcaatag caatagcaac aatagcagca gcaatagcaa 1261 caactactat aacattaaca acaacaatag cagcaacagc ggcggccaca taatgttagc 1321 ctctgccagc gcctctgctg ccgcgcgaaa acgcagtcgc agcgcgagta acggcagcaa 1381 aagcagcaaa gccgtcagtg gccgcaaatt aaccaaaagc atgtccgccg gcgcacagtt 1441 gcagatggcc ccgcagacca cttcggccct aagtcaccac catcccaatc agcagcagca 1501 gctgcagccg ccgcagcaac agcaggcaca gcccccgcct ccgcaacagc agcagcactt 1561 tgccaaccat cacagcgccc agcagcagtc gcagcaacag caggagcaac agaatcccca 1621 gcaggcgcaa cagcagcagg cgcagcagca gcagatcctc ccgcagccgc atctgcagca 1681 cctgcacaag catccgcacc agctgcaact gcaccagcag cagcagcagc tccaccagca 1741 gcagcaacac ttccaccagc agcagcaaca gtcgctgcag gggctgcacc agggcagcag 1801 caatccggat tcgaatatga gcactggctc ctcgcacagc gagaaggatg tcaacgatat 1861 gctgagtggc ggcggagcag cgcccggagt agctgccgcg gcagccattc aacagcaaca 1921 tcccgccttt gcgcccgccc tgggaatgca gcagccaccg ccgccgccgc cgcagcactc 1981 caataacggg ggcgagatgg gctacttgac ggcgggcacg accacgacgg cctcggtgac 2041 ggcggtgggc aagcccagga cgccggcgga gcggaagcgg aagaggaaaa tgccgcagac 2101 cagtgcggac gaggcgggga gtggcggtgg gtccggcgga gctggagcag ccgtggtgaa 2161 caacagcagc ctgaagggca aatccctggc ctttcgtgat atgcccaagg tgaacatgag 2221 cctgaatctg ggcgatcgtc tgggcggttc ggccggcagt ggcggcggag ccggaggcgc 2281 cggcagcgga gggagtggcg ccggttccgg ttccggcagt ggcggcggca agagtgcccg 2341 catcatgctg cccgtcagcg acaacaagaa gatcaacgac tacttcaaca agcagcaaac 2401 gggcgtgggc gtcggtgtgc caggtggagg tggtgcggga ggcaataccg ccggtctccg 2461 aggatcccac acgggtggcg gcagcaagtc gccctcatcc gcccagcagc agcagcagac 2521 gacccaacag cagcagcagc aggcgagcgg agtggcgacg ggcggtgggg caggaggagc 2581 cgccgccaac cagcaggtgc aggtgcagac gagcagcgcc tacgccctgt atccaccagc 2641 tagtccccaa acgcagacgc cgcagcaaca gcagcagcag cagccgggag ccgacttcca 2701 ctacgtcaac tccagcaagg cgcagcagca gcagcaacag cagcagcagc gccagcagca 2761 acagacttcc aatcaaatgg ttcctccaca cgtggtcgtc ggcctgggtg gtcatcccct 2821 gagcctcgcg tccatccagc agcagcagca gacgcccctc tcccagcagc agcagcagca 2881 gcagcaacaa cagcagcagc aacagcagca actgggaccg ccgaccacat cgacggcctc 2941 tgtcgtgtcc acgcatccgc accagctcgg ctccctggga gttgtgggca tggtcggtgt 3001 gggcgtcggc gttggggtaa atgtgggcgt gggaccgcca ctgcctccgc caccgccgat 3061 ggcgatgccg gcggccatta tcacatacag caaggccacc caaacggagg tctcgctgca 3121 cgagctgcag gaacgcgagg cggagcacga gtcgggcaag gtgaagctgg acgagatgac 3181 gcggctgtcc gacgagcaaa agtgccagat tgtcggcaac cagaagacga tcgaccagca 3241 caagtcgcac attgccaagt gcattgatgt ggtcaagaag ctgctgaagg aaaagagcag 3301 catcgagaag aaggaggcgc gacagaagtg catgcagaac cgcctgagac tcggccagtt 3361 tgtgacccag cgagtgggcg ccacattcca ggagaactgg acggacggct atgcgttcca 3421 ggagctgagt cggcggcagg aggagataac cgccgagcgc gaggagatcg accggcagaa 3481 gaagcagctg atgaagaagc gtccggcgga gtccggacgc aagcgcaaca acaacagcaa 3541 ccagaacaac cagcagcagc agcagcaaca gcagcaccaa cagcagcagc agcagcagaa 3601 ttccaactcg aacgattcct cgcagctgac gggcggcgtt gtcaccggac cgggcagcga 3661 tcgcctgggc ggcgcggcag gcggcgttag cgtcgacagc ggattgggtg gcaacaatgc 3721 gggcgcaatc ggtggcggag ctgtgggcgg tggcgttgga ggcggcggcg tcggaagcgg 3781 cggcgttggc ggtgtcggcg gcggcggagg acgtggtcta tcgcgcagca actcgacgca 3841 ggccaatcag gctcaactgc tgcacaatgg cggcggcgga tcggggggca atgtgggcaa 3901 ctcgggcggc gtcggcgatc gactgtcgga tcgaggagga ggcggcggcc tcgggggcaa 3961 cgacagcggc agctgctcgg actcgggcac gttcctcaag ccggatcccg tttcgggggc 4021 atataccgcg caggagtact acgagtacga tgagatcctc aagctgcgcc agaatgccct 4081 caagaaggag gacgccgacc tgcagctgga gatggagaag ctggagcggg agcgcaatct 4141 gcacatccga gagctcaagc ggatactcaa cgaggatcag tcccgcttca acaaccatcc 4201 cgtgctgaat gatcgctacc ttctgctgat gctgctgggc aagggcggct tctcagaggt 4261 ccacaaggcc ttcgacctca aggagcaacg ctatgtcgca tgtaaggtgc accaattaaa 4321 caaggattgg aaggaggata agaaagctaa ttatatcaaa cacgctttgc gggaatacaa 4381 catccacaag gcgctggatc atccgcgggt cgtcaagctc tacgacgtct tcgagatcga 4441 tgcgaattcc ttttgcacag tgctcgaata ctgtgatggc cacgatctgg acttctattt 4501 gaagcaacat aagactatac ccgagcgtga agcgcgctcg ataataatgc aggttgtatc 4561 tgcactcaag tatctaaatg agattaagcc tccagttatc cactacgatc tgaagcccgg 4621 caacattctg ctcaccgagg gcaatgtctg cggcgagatc aagatcaccg actttggtct 4681 gtcgaaggtg atggacgacg agaactacaa tcccgatcac ggcatggatc tgacctccca 4741 gggagccggc acttattggt atctgccacc cgagtgcttt gtggtgggca aaaatccgcc 4801 caagatctcc tccaaggtgg acgtgtggag tgtgggcgtg atcttttacc agtgtctgta 4861 cggcaagaag cccttcggtc ataaccaatc gcaggccacg attctcgagg agaacacgat 4921 cctgaaggcc accgaagtgc agttctccaa caagccaacc gtttccaatg aggcaaagag 4981 cttcattcgg ggctgcttgg catatcgcaa ggaggatcgc atggatgtgt tcgcgctggc 5041 caggcacgag tacatccagc cgccgatacc gaagcacggc cgaggctcgc tcaaccagca 5101 gcagcaggcg cagcaacagc agcagcaaca acagcagcag cagcagcaac agtcgtcgac 5161 gtcgcaggcc aattccaccg gccagacttc gttctctgcc cacatgtttg gcaatatgaa 5221 tcagtcgagt tcgtcctagc tgccaaccaa gcgtaattcc aactcataat tcgccgccgc 5281 cgcagtagca gcagcaactt cagctgccag ccaacagcaa caccaacagc agcagcagca 5341 gcaacatcag cagcagcatc ttcaactcca gcaataccag ccgaatcagc agctccattt 5401 gcaaaacagt agcagcaact atgcggccac gcttctcgat gcagcggcct tttgctacga 5461 aaccgtgatg gatgcagccc acttccacaa caataacaac aacagcacca tcatcaacaa 5521 caatatgcag acaatgccgg cgaatgctgt caatgctgct gctgccggag gaggaggagc 5581 aggaggagca gcaggaggag ggggaacacc gacctaccaa gggaaataca agcgctggca 5641 gcagcaacag ttgcaacagc aggcgcaact gcaacagcag caacacaagc tactgctgca 5701 acaagagctg ctgtagagta agaaaaaaaa tacaagggtg atgatgattt acgacggaat 5761 aatgacaagg gagtttgaga gaaggaggag agctgcctgc aacactgccg ccaagccaag 5821 ctaatgttgc tgctgcaaca gcaacaccgt cagcaacaac aacaacaaca gtaacaacac 5881 cccaagaatt tccgcagcga gtcgcaaaac aacaacaaaa acttaaatta atgaaactat 5941 atataaatat atatatgcat atatatatta aatgtgataa acaagcgtaa agcaaaaaaa 6001 aaaatacaaa acaagaaagg aaagcagcaa atacagcagg agaaagacga acaaccaagg 6061 gggaaaaacc cggaagatag ggaaaagcaa agctgcagca aaaaaccaga agagaagagc 6121 atagaaagag ggagcagaag aaaagcagaa agttgaaagc tgagatgaat tgccgaggag 6181 aaagcttgag aaattgttta taaaggctgc tataaacaca cacttttttt tttttgttaa 6241 ctataaatac caagcagaat aattaatcta aaataaataa taattaaatg ctaaatgtaa 6301 attagtaagt agggtggcat ctaaaaacaa gagaagaacg caaagaacac gattcccaag 6361 aacgcgaaaa ggcacataat attttttctt tgtattaaaa ataataatgg taccataaag 6421 aaaacgtagc aaattagcgt aggctaaata gcacagtata aaaactgaaa ctaaaaaaac 6481 agtaaaagca gcagaaaaat agaaatgatt gtaaacacgc agagcagagg aaacatttgc 6541 aatgggaaat tacaaattgt tgcattgttt tttgggttat gtttgtttgt agttcaaaca 6601 ttaaaataac actcatacac acaacacaac acaacacagc acagcacaca gacactgcag 6661 actacttttg ccttacaaga agtgaaaaaa acactaattt taattgccaa tttccatttt 6721 gtatacatgc atattcaata ttgtgtactc gcatatatac acacatatat atatttatca 6781 ttttctaccc gcgaatcttt ctttttattt ttttaacgta tgcaccaacg aacatttaat 6841 tttaacgctt ttaaacgaag ttaaaaccaa cttataccct atcttaattt tgaaatggaa 6901 aagaaatcat tctttgtttg ttttgtatca aaatccaaaa gaaatttaat ttaaaaataa 6961 aattaaaaaa taccatcaat cacacaccgc acacacatat acatttgtat atactcgtat 7021 ctgaacgaca aacaaaaaac cgaagcgata aaaactaaaa acttaatcaa acgaaatgca 7081 attccaaaat atccaagaga aaaagaatca gataaccatt ttttttatat gccacaagaa 7141 aaacgctaag aacatgagaa acggcgagaa aaatcgatgg aaggggaaaa gctagagatc 7201 aggttctcag atcggatcag aaaatcggca gaaaaataaa cccatttgaa gtaatctact 7261 tctaattaca tagtaaacta atgtaatagt ttttattaaa tatatatata tatatgtatc 7321 gatatatata tacatacatg tttttttttt aattttaaaa ctatatttgt aatgcactat 7381 gcgtaacatt gtattaaata ttaatatcca aggcatatta atagaaatat atatataaac 7441 ataaaaaacc agaaaaaaga acatgaacta ccaacctaaa tgtttcaata atatatagat 7501 ctatatgtat gtaaaaccga tatgaaatct gcctaatgcc agacaaaaaa aaaccctaca 7561 agagaaagtt gaaagctccg aagagtgaaa gagtgaaaga gatgga