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LOCUS XM_017138075 2947 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017138075 VERSION XM_017138075.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017138075.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2947 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2947 /gene="LOC108054951" /note="forkhead domain 3F; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108054951" CDS 100..2373 /gene="LOC108054951" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_016993564.2" /db_xref="GeneID:108054951" /translation="MIVNMPVNGTGSASSPTSNPNPGNNNLNNNNSSTTNQNNSSLPG DYNFLKRKYDDQEDLALGQVYEPIESNPWKKRHLDYDPAGDLQFHLQLEQPASNPNPA VNPAAPAQSQSQSQSQSQSQSSTTSFINDLFAYDSSLLVPTAAYSHCPPSSAPLEDNG GWTGGELLELDHRYNSGLQAELGQLNATLPPPPPATSSSSSQNSAPQQPNPGQNPNHS QNFLVPQKQRLLSAGRRTSSGSQGSGVAHEATEADFEDKNLSWLLNFKFDEFPHLSPH NQVHGQAVNLPEGGAPHPHPPASTAMAISTSPCSSASPTSASVLSAASATNSTHSLGS GMMDQRARSPKSCSSAAMPTSGGGGGGAGGGGCSGVAASPAAGVGSTKTGRKFEELVM EVTSELDGNDMIVAEHVVVEDTSSKAPKKPPFTYTELIEYALEDKGELTVSGIYQWIS DRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAENVLAWEHK KQRLDLFFKMESINRERIQQHQQQQQLQQQHQQQQQQQHSPQQQQQHQTAQQASSCLY DEAAVAAATLTQEMMQSSGGGNEATQQQHHHSHQNHQSHHHNHHHQRLLPFNDLLSDD ELRKTAGQILNGIHREVEVQSVNSIISTYHDVLLDNDYLNPIHKDVVVTESVLRQQHG NLGGGSHNHLGGNGHMGSGSGSGSGSSQYYITEIDPMELGIQMSHQVEPSEEEVLFSD EFNLNYFGYNPGSDIVA" misc_feature 1360..1578 /gene="LOC108054951" /note="Forkhead domain; Region: Forkhead; pfam00250" /db_xref="CDD:459732" ORIGIN 1 tttttttccc gtgcctttct gcctttgcct tttttcaccg agtgtgcgtt gtgtgttttt 61 cctggcttac gtgattgaaa ttgagacagc caggacatca tgattgtcaa catgcccgtc 121 aacggcacgg gcagtgcatc cagccccaca tcgaacccca atcccggcaa caacaacctg 181 aacaacaaca acagcagcac caccaatcaa aataatagta gtcttcccgg ggactacaat 241 ttcctgaagc gcaagtacga cgatcaagag gatctggcct tgggccaggt ctacgagccg 301 atcgaatcga atccctggaa gaagcggcac ctggactacg acccagccgg cgatctgcag 361 ttccacctgc agctggaaca gccggccagc aatccgaatc cggcagttaa tccagctgca 421 cccgcccaat cccaatccca gtcgcaatct cagtcgcagt ctcagtcatc cacgacgtcc 481 ttcatcaacg atctctttgc ctacgacagc agcctcctgg tgcccaccgc cgcctactcc 541 cactgccccc cgtcgagtgc tccgctggag gacaatggcg gctggacggg tggcgagctc 601 ctggagctgg accatcgcta caactccggc ctgcaggcgg agctgggaca actgaatgcc 661 acgctgccgc cgccgccgcc agccacgtca tcatcatcat ctcagaactc tgcaccacag 721 cagcccaatc ctggccagaa tcccaatcac agtcagaact ttctggtgcc gcagaagcag 781 cggctactgt cggcgggtcg acgcacctcg tcgggctccc agggaagtgg tgtcgcccac 841 gaagccaccg aggcggactt cgaggacaag aacctgtcct ggctgctgaa cttcaagttc 901 gacgagttcc cgcacctgtc gccgcacaat caggtccacg gacaggcagt caatctgccg 961 gaaggcggtg ctcctcaccc acatcctcct gcctccacgg cgatggcgat cagcacgtca 1021 ccctgcagtt ccgcctcgcc cacatccgcc tccgtcttat ccgccgcctc agccacgaac 1081 tcgacgcatt ccctgggatc gggaatgatg gatcaacggg ccaggtcgcc gaagagctgc 1141 tccagtgcgg cgatgccaac gagcggagga ggtggaggtg gagcaggagg aggcggctgc 1201 tctggagtcg ctgcctctcc agcagccgga gtgggctcca ccaagacggg ccgcaagttc 1261 gaggagctgg tgatggaggt cacctcggag ctggacggca acgacatgat cgtcgccgag 1321 cacgttgtcg tcgaggatac atcgtccaag gcgccaaaga aaccaccgtt cacctacacg 1381 gagctcatcg aatacgccct cgaggataag ggtgagctga ctgtgtcggg catataccaa 1441 tggatatccg atcgctttcc ctactacaaa tccaatgatg accgctggaa gaactcagtt 1501 cgacacaatc tctcgattaa cccacacttt cgcaagggcg tgaaggcgcc tcaaggagcc 1561 ggtcacctgt gggccatttc cagcggagat tcggccgaga atgtcctggc ctgggagcat 1621 aagaagcagc gactggattt attctttaaa atggagtcga tcaaccgtga gcgcattcag 1681 cagcaccagc agcagcagca attgcagcag caacatcagc agcagcagca acagcaacac 1741 tcgccgcagc agcagcagca acatcagacg gcacagcagg ccagcagttg tctctacgat 1801 gaagcggcgg tggcagccgc cactctcacc caggaaatga tgcagtcgtc cggcggtggc 1861 aacgaggcca cccagcagca gcatcaccac agccaccaga accaccagag ccaccatcac 1921 aaccatcacc accaaagact gttgcccttc aacgatctgc tgagcgacga cgagctgcga 1981 aagacggcgg gccagattct gaatggaatc catcgcgagg tggaggtgca gtcggtcaac 2041 tccatcatca gcacttatca cgatgtcctg ctggataatg actatctcaa tcccatacac 2101 aaggatgtgg tggtcacgga aagtgtcctg cggcagcagc acggcaacct gggcggcggc 2161 agccacaacc atttgggcgg caatgggcac atgggcagcg ggagcggaag tggaagcggc 2221 agctcgcagt actacatcac cgagatcgat cccatggagc tgggcatcca gatgtcgcac 2281 caggtggagc cctccgagga ggaggtgctc ttcagcgacg agttcaacct caactacttt 2341 ggctacaatc ccggcagcga tatagtcgct tgaccgcgca gacagcagac tccagtttca 2401 gctcctccag ctcccgctca gccaagcaat tgaactatac aaatatatag gtatatctat 2461 atattgatcg atcctgctcg atgccatgac aacaatcgta attgtagccg atctactcat 2521 aagccaactc taaacgaata ctagtcacac ttgaacaaca cttacatgta accacctaaa 2581 ccaaagtccc atttaccatt taccatttag accctatgta tagtctagtc ttgagtgtac 2641 caataacaac cccagccccc ctccacaaca agtcatattt ttttgtctat actttagttg 2701 aatacctagc cgataagtag cttgctagcc ctaagtactt actcgtatat ctatgtatct 2761 atctgcagat attacatact tagctcttgc tcgtctccga atttagttaa gtgtttttac 2821 atgtagccga atatccgtaa acaataccag gcagattgat ctcctctcct cttaaatgtt 2881 accgaaacta ggtctagaga gcagacaagt aatacccatg tccgtagaac taatggcacc 2941 taactgg