PREDICTED: Drosophila takahashii nucleolar complex protein 4

LOCUS       XM_017138074            1659 bp    mRNA    linear   INV 09-DEC-2024
            homolog B (LOC108054950), transcript variant X2, mRNA.
ACCESSION   XM_017138074
VERSION     XM_017138074.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017138074.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1659
                     /gene="LOC108054950"
                     /note="nucleolar complex protein 4 homolog B; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:108054950"
     CDS             96..1586
                     /gene="LOC108054950"
                     /codon_start=1
                     /product="nucleolar complex protein 4 homolog B isoform
                     X2"
                     /protein_id="XP_016993563.2"
                     /db_xref="GeneID:108054950"
                     /translation="MKRLAGKKDEVVAEPLAKKQLQSKANSLLNAKNVDIKTLKGFVQ
                     LLDTPDNVPAGEVMNTLEVIFKNLLKRKSAEGADKQTLKIRELYEETWLLLLENLLVD
                     SESSAALKVCMQLIKVEAKHPVATNKGWPTHRIRDILSTLLNAEETPTNALSNYGKYC
                     KNLDVLEITLKQLIALVPQEDFKSIPIKAMNFLAIANLLDFGKTVLNTADYHVESAKS
                     HKFSLEANRKRLNDLWLVIMTKGSEVDERLHRQILVVLLERVINHLDDPIQLTDFLMD
                     SLHQFDGPIALLALQGIFTLMQKQNITYPDVYEKLYNMFYPRMFYNKYKARLFYLADI
                     FLTSTHLPENLVAAFVKRLARLALQSPTEDAVIMIRFVCNLLLRHTGLQKLIRGSHAA
                     EEVSDPYNETETDPVKSDAINSSLWEIALLQKHVVPEVANAARFINTSLPIMEFDLAP
                     LLDRKECNIFDDELQSKAKQFALNYERPSTLALPKNEFVTKYWELI"
     misc_feature    951..1388
                     /gene="LOC108054950"
                     /note="CBF/Mak21 family; Region: CBF; pfam03914"
                     /db_xref="CDD:461090"
     polyA_site      1659
                     /gene="LOC108054950"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctccccgaga gcacgccgca tgttttcgtg ttttgttttg ctttggattt aaattgttgc
       61 ttaggaaaac ccaaaccaca tttagcagat tgacaatgaa acgattggct ggaaagaagg
      121 acgaggtcgt agcggagccg ttggccaaga agcagctgca gtctaaggcc aattccctgc
      181 tgaatgccaa gaatgtggac atcaaaacgc tcaagggatt cgttcaactg ctggacaccc
      241 ccgataatgt gccggctggg gaggtgatga acaccctcga ggtgatattc aagaacctgt
      301 taaaaagaaa atccgccgag ggcgccgaca aacagaccct gaaaatccgg gaattgtacg
      361 aggaaacctg gttgctgcta ctggagaacc ttctcgtgga ttccgagagt tccgcggccc
      421 taaaggtgtg catgcagctg atcaaagtgg aggccaagca tcccgtagcc accaataagg
      481 gctggcccac ccacaggatc cgggatatcc tgagcactct cctaaacgcc gaggaaacac
      541 cgacgaatgc gttgagcaac tatgggaaat actgcaagaa tctcgacgtt ttggagatta
      601 ccctcaagca gttaatagct ctagtgcccc aggaggactt caagagcatc cccatcaagg
      661 ccatgaactt cctggccatt gcgaacctcc tggactttgg taaaaccgtt ctcaacactg
      721 ccgattacca cgtggaaagt gcgaagagtc acaaattcag cttggaggcc aatcgcaaga
      781 gattgaacga cctctggctg gttataatga ccaagggcag cgaagtggac gagaggctgc
      841 accggcagat actggtggtc ctgctggagc gcgtaatcaa ccatttggac gaccccatcc
      901 agctgaccga cttcctcatg gactcgctgc atcagttcga tggacccatc gccttgctgg
      961 ccctccaggg catcttcacg ctgatgcaga agcagaacat cacctatccc gatgtgtacg
     1021 agaagctgta caacatgttc tacccccgga tgttctacaa caagtacaag gcgcgcctgt
     1081 tctacctggc cgacatcttc ctcacctcca cccatctgcc ggagaacctg gtggcggcct
     1141 ttgtgaagcg tctcgcccgc ctggccctcc aatcgcccac cgaagatgcc gtgatcatga
     1201 tccggttcgt ctgcaacctg ctgctgcggc acacgggcct gcagaaattg attcgcggca
     1261 gtcatgcggc cgaggaagtg agcgatccgt acaacgaaac ggaaacggat cccgtcaaat
     1321 cggatgcgat caatagttcg ctgtgggaga ttgcgctgct gcagaagcac gttgttccgg
     1381 aggtggccaa tgcggccagg ttcatcaaca cctcgctgcc catcatggaa ttcgatttgg
     1441 cgccgctctt ggacagaaag gagtgcaata tcttcgacga cgaactgcag tcgaaggcca
     1501 agcagtttgc cctgaactac gagcggccct ccactttggc tctgcccaaa aacgagttcg
     1561 tgaccaagta ctgggaactc atctagatta gtgtgtgtgc tattgtgcta agtttaagca
     1621 ggattaaagt gctgacgggc cagttcggcc tgaaaccaa