PREDICTED: Drosophila takahashii nucleolar complex protein 4

LOCUS       XM_017138073            1662 bp    mRNA    linear   INV 09-DEC-2024
            homolog B (LOC108054950), transcript variant X1, mRNA.
ACCESSION   XM_017138073
VERSION     XM_017138073.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017138073.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1662
                     /gene="LOC108054950"
                     /note="nucleolar complex protein 4 homolog B; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:108054950"
     CDS             96..1589
                     /gene="LOC108054950"
                     /codon_start=1
                     /product="nucleolar complex protein 4 homolog B isoform
                     X1"
                     /protein_id="XP_016993562.2"
                     /db_xref="GeneID:108054950"
                     /translation="MKRLAGKKDEVVAEPLAKKQLQSKANSLLNAKNVDIKTLKGFVQ
                     LLKDTPDNVPAGEVMNTLEVIFKNLLKRKSAEGADKQTLKIRELYEETWLLLLENLLV
                     DSESSAALKVCMQLIKVEAKHPVATNKGWPTHRIRDILSTLLNAEETPTNALSNYGKY
                     CKNLDVLEITLKQLIALVPQEDFKSIPIKAMNFLAIANLLDFGKTVLNTADYHVESAK
                     SHKFSLEANRKRLNDLWLVIMTKGSEVDERLHRQILVVLLERVINHLDDPIQLTDFLM
                     DSLHQFDGPIALLALQGIFTLMQKQNITYPDVYEKLYNMFYPRMFYNKYKARLFYLAD
                     IFLTSTHLPENLVAAFVKRLARLALQSPTEDAVIMIRFVCNLLLRHTGLQKLIRGSHA
                     AEEVSDPYNETETDPVKSDAINSSLWEIALLQKHVVPEVANAARFINTSLPIMEFDLA
                     PLLDRKECNIFDDELQSKAKQFALNYERPSTLALPKNEFVTKYWELI"
     misc_feature    954..1391
                     /gene="LOC108054950"
                     /note="CBF/Mak21 family; Region: CBF; pfam03914"
                     /db_xref="CDD:461090"
     polyA_site      1662
                     /gene="LOC108054950"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctccccgaga gcacgccgca tgttttcgtg ttttgttttg ctttggattt aaattgttgc
       61 ttaggaaaac ccaaaccaca tttagcagat tgacaatgaa acgattggct ggaaagaagg
      121 acgaggtcgt agcggagccg ttggccaaga agcagctgca gtctaaggcc aattccctgc
      181 tgaatgccaa gaatgtggac atcaaaacgc tcaagggatt cgttcaactg ctgaaggaca
      241 cccccgataa tgtgccggct ggggaggtga tgaacaccct cgaggtgata ttcaagaacc
      301 tgttaaaaag aaaatccgcc gagggcgccg acaaacagac cctgaaaatc cgggaattgt
      361 acgaggaaac ctggttgctg ctactggaga accttctcgt ggattccgag agttccgcgg
      421 ccctaaaggt gtgcatgcag ctgatcaaag tggaggccaa gcatcccgta gccaccaata
      481 agggctggcc cacccacagg atccgggata tcctgagcac tctcctaaac gccgaggaaa
      541 caccgacgaa tgcgttgagc aactatggga aatactgcaa gaatctcgac gttttggaga
      601 ttaccctcaa gcagttaata gctctagtgc cccaggagga cttcaagagc atccccatca
      661 aggccatgaa cttcctggcc attgcgaacc tcctggactt tggtaaaacc gttctcaaca
      721 ctgccgatta ccacgtggaa agtgcgaaga gtcacaaatt cagcttggag gccaatcgca
      781 agagattgaa cgacctctgg ctggttataa tgaccaaggg cagcgaagtg gacgagaggc
      841 tgcaccggca gatactggtg gtcctgctgg agcgcgtaat caaccatttg gacgacccca
      901 tccagctgac cgacttcctc atggactcgc tgcatcagtt cgatggaccc atcgccttgc
      961 tggccctcca gggcatcttc acgctgatgc agaagcagaa catcacctat cccgatgtgt
     1021 acgagaagct gtacaacatg ttctaccccc ggatgttcta caacaagtac aaggcgcgcc
     1081 tgttctacct ggccgacatc ttcctcacct ccacccatct gccggagaac ctggtggcgg
     1141 cctttgtgaa gcgtctcgcc cgcctggccc tccaatcgcc caccgaagat gccgtgatca
     1201 tgatccggtt cgtctgcaac ctgctgctgc ggcacacggg cctgcagaaa ttgattcgcg
     1261 gcagtcatgc ggccgaggaa gtgagcgatc cgtacaacga aacggaaacg gatcccgtca
     1321 aatcggatgc gatcaatagt tcgctgtggg agattgcgct gctgcagaag cacgttgttc
     1381 cggaggtggc caatgcggcc aggttcatca acacctcgct gcccatcatg gaattcgatt
     1441 tggcgccgct cttggacaga aaggagtgca atatcttcga cgacgaactg cagtcgaagg
     1501 ccaagcagtt tgccctgaac tacgagcggc cctccacttt ggctctgccc aaaaacgagt
     1561 tcgtgaccaa gtactgggaa ctcatctaga ttagtgtgtg tgctattgtg ctaagtttaa
     1621 gcaggattaa agtgctgacg ggccagttcg gcctgaaacc aa