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PREDICTED: Drosophila takahashii inactive selenide, water


LOCUS       XM_017138061            1471 bp    mRNA    linear   INV 09-DEC-2024
            dikinase-like protein (LOC108054940), mRNA.
ACCESSION   XM_017138061
VERSION     XM_017138061.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017138061.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1471
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1471
                     /gene="LOC108054940"
                     /note="inactive selenide, water dikinase-like protein;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 Proteins"
                     /db_xref="GeneID:108054940"
     CDS             123..1319
                     /gene="LOC108054940"
                     /codon_start=1
                     /product="inactive selenide, water dikinase-like protein"
                     /protein_id="XP_016993550.2"
                     /db_xref="GeneID:108054940"
                     /translation="MSYAADVLNSAHLELHGGGDAELPRPFDPTDLDLDASFRLTRFA
                     DLKGRGCKVPQDVLSKLVSVLQEDYSAQDQEPQFLNVAIPRIGIGLDCSVIPLRHGGL
                     CLVQTTDFFYPIVDDPYMMGKIACANVLSDLYAMGVTDCDNMLMLLAVSTKMTEKERD
                     VVMPLIMRGFKDSALEAGTTVTGGQIVVNPWCTIGGVASTICQPNEYIVPDNAAVGDI
                     LVLTKPLGTQVAVNAHQWIDQPERWNSIKLAVSEEDVRKAYHRAMNSMSRLNRVAARL
                     MHKYNVHGATDITGFGLLGHAQTLAAHQKKNVSFVIHNLPVIAKMAAVAKACGNMFQL
                     LQGHSAETSGGLLVCLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNKTARIIAKPRVI
                     EVPAKD"
     misc_feature    240..1250
                     /gene="LOC108054940"
                     /note="Selenophosphate synthetase (SelD) catalyzes the
                     conversion of selenium to selenophosphate which is
                     required by a number of bacterial, archaeal and eukaryotic
                     organisms for synthesis of Secys-tRNA, the precursor of
                     selenocysteine in selenoenzymes. The...; Region: SelD;
                     cd02195"
                     /db_xref="CDD:100031"
     misc_feature    order(429..440,444..446,450..452,516..518,549..551,
                     558..560,567..569,675..677,696..701,711..713,1017..1019)
                     /gene="LOC108054940"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:100031"
     misc_feature    order(504..506,516..518,669..677)
                     /gene="LOC108054940"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:100031"
ORIGIN      
        1 gcaaccctgt tgtgacatct cgctcgttgg aaaagcaaaa ccaggcgcaa aataaatcaa
       61 atttgcttac gtccccatac aattctcgtt gtacctacgc acaagcaaaa ctcggaagca
      121 agatgagcta cgccgctgat gtcttgaact cggcccactt ggagctgcat ggcggcggcg
      181 acgccgagct gcctcgtccc ttcgatccca cggacctcga tttggacgcc tccttccggc
      241 tcacccggtt cgctgacctc aagggtcgcg gctgcaaggt gccgcaggat gtgctctcca
      301 agctggtgtc cgtcctgcag gaggactact ccgcccagga ccaggagccg cagttcctca
      361 acgtggccat cccccggatc ggcatcggtc tcgactgctc cgtcattccg ctgcggcacg
      421 gcggcctctg cctggtgcag accaccgatt tcttctaccc cattgtcgat gatccctaca
      481 tgatgggcaa aatcgcctgc gccaatgtgc tgagcgattt gtatgccatg ggagtcaccg
      541 attgcgacaa tatgctgatg ctcctggcgg tcagcaccaa gatgacggag aaggagcgcg
      601 atgtggtcat gccactgatc atgagaggct tcaaggactc ggccttggag gcgggcacca
      661 ctgtaactgg gggacagatc gtggtgaacc cttggtgcac cattggtggc gtggcctcga
      721 ccatttgcca gcccaacgag tacattgtgc ccgataatgc ggcggtcgga gatatcctgg
      781 tgctgaccaa gcccctgggc acccaggtgg ccgtgaatgc ccaccagtgg atcgaccagc
      841 cggagcgctg gaatagcatc aagctggcgg tgtccgagga ggatgtgcgc aaggcctatc
      901 atcgcgccat gaactcgatg tcgcggctaa atcgcgtggc cgctcgcctc atgcacaagt
      961 acaatgtcca cggagccacc gacatcacgg gattcggact actgggtcat gctcaaactt
     1021 tggccgccca tcagaagaag aacgtgtcgt ttgtcattca caatctgccg gtgatcgcca
     1081 agatggccgc ggtggccaag gcctgcggca acatgttcca gctgctgcag ggccactcgg
     1141 ccgagacctc gggcggatta ctcgtctgcc tgccgcgcga gcaggccgcc gcctattgca
     1201 aggacatcga gaagcaggag ggctaccagg cctggattat tggaatcgtc gagaagggca
     1261 acaagaccgc tcgcatcatc gccaagccgc gcgtcatcga ggtgcccgcc aaggattagg
     1321 tgaccagccc gatttttata caattaacta tcgtaatttt aacgtaaccg gcttcatcgg
     1381 gctttgtttt ttataaaaaa aaagcttatc aactacagat tctctgatca ctataatcat
     1441 ggacgtcgct actgaaatac gagtgaataa a