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PREDICTED: Drosophila takahashii eukaryotic translation initiation


LOCUS       XM_017138057            1961 bp    mRNA    linear   INV 09-DEC-2024
            factor 4E7 (eIF4E7), transcript variant X2, mRNA.
ACCESSION   XM_017138057
VERSION     XM_017138057.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017138057.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1961
                     /gene="eIF4E7"
                     /note="eukaryotic translation initiation factor 4E7;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 Proteins"
                     /db_xref="GeneID:108054939"
     CDS             158..1663
                     /gene="eIF4E7"
                     /codon_start=1
                     /product="eukaryotic translation initiation factor 4E1"
                     /protein_id="XP_016993546.2"
                     /db_xref="GeneID:108054939"
                     /translation="MFPNNFYKMKNFANPKSMFKSSSGSTNDDSSSSLQKVAASSSQQ
                     TTTAAVVAQTQPAKNQEPGKNAPKKAVTPATQDTPKQGKNKNKKGKKNQKTVPPPRNP
                     SQVSKDSSSLNLKKNQTKEVATKKVQEKPKEKVLPEQKKVQEKPKEKVLPEQKKVQDK
                     QKSLPEKKNVQDKKNVQDKKNVPEKKNNGQDKLTPEQKLLELKIQKKLSEQKLLDRML
                     EPKIYQNTYPDQKQIEKKIQKKLSEQKILDKMLEPEIYAKAVSQPLEPQAPQDVQKDA
                     VEVPQEEHNEPPASDLSEGNDNLVTIEAEEDTIDSQETEEPDEGPQHPLNNRWTLWYL
                     ENDRTKTWEEMLHEVTSFETVENFWSLVTHIKPPSDLKIGSDYCLFKKGIRPMWEDEA
                     NCRGGRWVISLSKTAKTDLDNFWMDSMLCLIGEACENSVELCGVVVNIRGKNNKISVW
                     TADGGKEEAVLEIGRKLREGLHMDSAYSLQYQLHKDTMVKQGSTVKSIYTL"
     misc_feature    <341..>643
                     /gene="eIF4E7"
                     /note="cell division protein DedD; Provisional; Region:
                     PRK11633"
                     /db_xref="CDD:236940"
     misc_feature    <497..>793
                     /gene="eIF4E7"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
     misc_feature    1127..1600
                     /gene="eIF4E7"
                     /note="Eukaryotic initiation factor 4E; Region: IF4E;
                     pfam01652"
                     /db_xref="CDD:460281"
     polyA_site      1961
                     /gene="eIF4E7"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tatagtcgtc gttgagtttt cttttcaagt gagttttacg agctgtctta taaggtttgc
       61 ttatgccagg aacacaacac aagcacagtg caggttttta gtaaaaaaaa aaaaaccgga
      121 aacactagat tagagtagaa atcttcccca agccgccatg tttcccaaca atttttacaa
      181 gatgaagaac tttgccaatc cgaaatcgat gttcaagagc agcagcggca gcaccaacga
      241 tgattcctcg tcgtccctcc agaaggtggc agcttcatct tctcaacaaa ccaccaccgc
      301 tgcagtggtg gcccaaactc aaccggcgaa gaaccaggaa ccggggaaga atgcccccaa
      361 gaaggcagtg actccagcga ctcaagatac cccaaagcag gggaagaaca agaacaagaa
      421 gggcaagaag aatcagaaga ctgtgccgcc tcctcgtaat cctagccagg tgagcaagga
      481 ttcctcttca ttgaatctaa aaaagaatca gacaaaggag gtggcgacaa agaaggtgca
      541 ggagaaaccc aaagagaagg tccttcccga gcaaaagaaa gtgcaggaga aacccaaaga
      601 gaaggtcctt cccgagcaaa agaaagtgca ggataagcag aaaagtctac cggaaaagaa
      661 gaatgttcaa gacaagaaga atgttcaaga caagaagaat gtgccggaga agaagaacaa
      721 tgggcaggat aagttgacgc cagagcaaaa gctcttggag ctaaaaatcc agaagaagct
      781 atcggagcaa aagctgcttg acaggatgct agagcccaag atctatcaga acacttatcc
      841 agaccaaaag cagattgaga agaagatcca gaagaagcta tcggagcaga aaattctcga
      901 taagatgctg gagcccgaga tttatgcaaa ggccgtttct caacctctgg aacctcaggc
      961 acctcaggat gtccagaagg atgcagttga agtgccacag gaggagcaca atgagccacc
     1021 agccagcgat ctcagcgagg ggaatgacaa tcttgtgacc atcgaggcgg aggaggatac
     1081 catcgatagt caggagaccg aagagcccga tgagggaccg caacatcctt tgaacaaccg
     1141 ctggacgctg tggtatctgg agaacgatcg caccaagacc tgggaggaaa tgctgcacga
     1201 ggtgacgagc ttcgaaaccg tggagaactt ttggtctctc gtgacccaca taaagccgcc
     1261 atcggatctg aaaattggca gtgactattg cctgtttaag aagggaattc gaccgatgtg
     1321 ggaggacgag gccaattgcc gtggcggccg ttgggtcatc agtttgagca agaccgccaa
     1381 gacggatctc gataactttt ggatggactc gatgctctgc ctgatcggcg aggcctgtga
     1441 gaattcggtc gaactgtgcg gcgtcgtggt gaatattcgc ggcaagaata acaagatctc
     1501 tgtgtggacc gccgacggcg ggaaggagga ggctgtcctc gagattggac gcaagttgcg
     1561 cgagggcctg cacatggata gcgcctattc gctgcagtat cagctgcaca aggacaccat
     1621 ggtcaagcag ggatccactg tcaaatcgat atataccctg taattagaag aagacgtaac
     1681 ctgtaaccca tatcaaaaat caaatagggc atcatcacac agcccctttt agttattttc
     1741 ggtatttttt cacctagcag ataaccacaa cccagcccaa cccaaccatt cgttcgagca
     1801 tcacccaaat catccattgt ccatcgttca gatgtcaatc ggatgccaaa atctgcagtc
     1861 aagtcttctc ctcttgtaca tgttgtacat gtaaatttta acgttgctct tgcggagcca
     1921 agaaataaat atataacctt atgagtgttt agccctaaca a