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LOCUS XM_017137884 2982 bp mRNA linear INV 09-DEC-2024 subunit 1 (Cbp80), mRNA. ACCESSION XM_017137884 VERSION XM_017137884.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137884.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2982 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2982 /gene="Cbp80" /note="Nuclear cap-binding protein subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108054806" CDS 273..2675 /gene="Cbp80" /codon_start=1 /product="nuclear cap-binding protein subunit 1" /protein_id="XP_016993373.1" /db_xref="GeneID:108054806" /translation="MSRRRAHDTEDEGYDHRRNKRRRVSENQEIEDRLESLILRVGER STSSVESNLEGLVSVLEADLGTFRLKILRILSDCAVRMPEKCTVYTTLVGLLNAKNYK FGGEFVDHMVKTFKESLKLCRWDAARYSLRFLADLVNCHVISATSLLQLLDTMIDVSN EDTVPQVRRDWFVFAVLSTLPWVGRDLYEKKESALESLLLRIEVYLNKRSKKHHNALR VWSSDAPHPQEEYLDCLWAQIRKLRQDNWAEKHIPRPYLVFDSILCEALQHNLPAIVP PPHHDNFEYPMPWVVYRMFDYTDCPDGPNLPGAHSIERFLIEEHLHHIIETYHHERKD CAAQLLSFPFKHKIPLEYCIVEVIFAELFHMPTPRYLDICYGSILIELCKLQPATLPQ VLAQATEILFMRIDSMNTSCFDRFVNWFSYHLSNFKFTWSWDEWDSCLLLDGEHPRPK FIQEVLQKCLRLSYHQRITEMMPTTYAKLIPMTPVPNYKYANEEAASLPGTTVAHQLV VAIRQKCTPEEVVNILKDIPSSGYSGEEMSDGSFNALKIDVFVQTLLNLGSKSFSHSF AAISKFHSVFRALAETEEAQICILHNIFELWSSHQQMMVVLIDKLLKLQIVDCSAVAT WIFSKEMTGEFTKMYLWEILHLTIKKMNKHVIKLNSELSEAKDKLAKADSSSSDSEDD SSHKRKKPITHADKPSEEVVERMEEKLEAANVNQKRLFLIVFQRFIMILSEHLLRSDT DGRDPDTDWYRWTIGRLQQVFLMHHEQVQKYSSTLETLLFTSDLDTHILEVFQQFVAL RA" misc_feature 363..1001 /gene="Cbp80" /note="Middle domain of eukaryotic initiation factor 4G (eIF4G); Region: MIF4G; smart00543" /db_xref="CDD:214713" misc_feature 1191..1691 /gene="Cbp80" /note="MIF4G like; Region: MIF4G_like; pfam09088" /db_xref="CDD:370287" misc_feature 1734..2582 /gene="Cbp80" /note="MIF4G like; Region: MIF4G_like_2; pfam09090" /db_xref="CDD:462675" polyA_site 2982 /gene="Cbp80" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctgttatcga taaacccgcc aatcgctggc ctggcaaaaa aagaagcatc gcgttttttc 61 cgtgaaaatt gtcgcaaggg cgtttcgaaa gttgccccgc taattggcac tcgctaaagg 121 agaacttagc gcagcggcag gattgccagc caaccgaatc ccgtccagga tcgccgcaag 181 agtccagttc gagcagcgtg ctttagtgtg agccggtggc cagggaacgc tactcggtgt 241 ttttgggaag ttcgcaacga attcgcggca agatgagtcg ccggagggca cacgacacgg 301 aggatgaggg ctacgatcac cggcgcaaca agcggaggcg cgtgtcggag aaccaggaga 361 tcgaggatcg cctggagtcg ctcatcctgc gcgtgggcga gcgcagcacc tcctccgtgg 421 agtccaacct ggagggactc gtctccgtgc tggaggccga cctgggcacc ttccgcctca 481 agatcctgcg catcctttcc gattgcgccg tgcgaatgcc cgaaaagtgc actgtttaca 541 ctacgctagt tggtctactg aatgccaaga actacaaatt cggcggcgag ttcgtcgacc 601 acatggtgaa gacgtttaag gagtcgctga agctctgccg ctgggatgcc gcccgctatt 661 cgctgcgctt cctggccgat ctggtcaact gccacgtcat ctcggccacc agtctgctcc 721 agctgctgga caccatgatc gatgtgtcca acgaggacac ggtgccgcag gtgcgccgcg 781 actggttcgt ctttgcggtg ctctccacgc tgccctgggt gggccgcgat ctgtacgaga 841 agaaggagtc ggcgctggag tcgctgctgc tgcgcatcga ggtctatctg aacaagcgct 901 cgaagaagca ccacaatgcg ctgcgcgtgt ggtcctcgga cgcgccgcat ccgcaggagg 961 agtacctgga ctgcctgtgg gcgcagatac gcaagctgcg ccaggacaac tgggcggaga 1021 agcatatacc gcgtccctac ctggtcttcg attcgatcct gtgcgaggca ctgcagcaca 1081 atctgcccgc gattgtgccg ccgccgcatc atgataactt cgagtacccc atgccctggg 1141 tggtctaccg catgttcgac tacaccgact gccccgacgg accgaatctg cccggcgccc 1201 attcgatcga gcgcttcctg atcgaggagc atctgcatca tatcatcgag acgtaccatc 1261 acgagcgcaa ggactgcgcc gcccagctgc tgagcttccc gttcaagcac aagataccgc 1321 tcgagtactg catcgtcgag gtgatcttcg ccgagctctt ccacatgccc acgccgcgct 1381 acctggacat ctgctacggc tccatcctga tcgagctctg caagctgcag ccggccacgc 1441 tgcctcaggt tttggcccag gccaccgaga tcctgttcat gcgcatcgac tcgatgaaca 1501 cctcgtgctt cgaccgcttc gtcaactggt tctcctacca tctgagcaac ttcaagttca 1561 cctggtcgtg ggacgagtgg gacagctgcc tgctgctcga cggcgagcat ccgcggccca 1621 agttcatcca ggaggtgctg cagaagtgcc tgcgcctctc gtatcaccag cgcatcaccg 1681 agatgatgcc cacgacgtac gccaagctga ttcccatgac gcccgtgccc aattacaagt 1741 acgccaacga ggaggcagca agtctgccgg gtacaacggt ggcccatcaa ctggtggtgg 1801 ccatccggca gaagtgcacg cccgaggagg tggtgaacat cctgaaggac ataccgagca 1861 gcggctacag cggcgaggag atgtccgacg gcagtttcaa tgctttgaaa atcgatgtat 1921 tcgttcagac gctgctgaac ttgggctcca agtcgttctc gcacagcttt gcggccattt 1981 ccaagttcca ttcggtattc cgcgccctgg ccgaaacgga ggaggcacag atctgcatcc 2041 tgcacaacat cttcgagctg tggtcctcgc accagcagat gatggtggtg ctgatcgata 2101 agctgctcaa gctgcagatc gtcgactgct cggcggtggc cacgtggatc ttctcgaagg 2161 agatgaccgg cgagtttacc aaaatgtatc tttgggagat tcttcacctg acgatcaaga 2221 agatgaacaa gcatgtgatc aagctgaatt ccgaattgag cgaggccaag gacaagctgg 2281 cgaaggcgga ctcttcgtcc agcgattcgg aggatgattc gtcgcataag aggaagaagc 2341 ccatcacaca tgctgacaaa ccctcagagg aggtggtgga gcgcatggag gagaaactgg 2401 aggcggcgaa tgtgaaccag aagcgtctgt tcctcatcgt cttccagaga ttcatcatga 2461 ttctctcgga gcatcttctg cgctccgata cggacggccg cgatccggat acggactggt 2521 accgctggac cattgggcgc ctgcagcagg tcttcctcat gcaccatgaa caagttcaga 2581 agtacagcag cactttggag acgctgctat tcacatcaga cctggacaca cacattttgg 2641 aggtgttcca acagtttgtg gccctacgtg cctaaaggag gagcagtaat cccaataacc 2701 aacgcccatt accccaccca aacgttcttt tatatactat gatgaatttc agtttgtaac 2761 gttcgacttg tttgccctga gaatatgatt tcggtcaagt agtcggctta tccacatacc 2821 caaacacaga aaaactttgt atttaagata cttttttatt atttgtaaac gacgcgaaaa 2881 gttaacaaca agaaagagaa aagataacgc aaataaagtc gaatagggaa gttctttatt 2941 acaatgataa agatcaagaa ggacattaaa gtacaataat aa