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LOCUS XM_017137883 5379 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017137883 VERSION XM_017137883.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137883.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5379 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5379 /gene="Pp2C1" /note="protein phosphatase 2C; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108054805" CDS 737..4714 /gene="Pp2C1" /codon_start=1 /product="uncharacterized protein Pp2C1" /protein_id="XP_016993372.2" /db_xref="GeneID:108054805" /translation="MLPANNNRSSSSHATTTTTNTNRCLIKSAIERTVVRLKETAATF SGTFQDAEADEQPCLEYDIINYYADNKQQQLSSSRHGGGSSNNNNNSGCHPALDASSS SVVVVVAPAAGREQELEGEREVPVLEVAAAEESEEMEVDVEGGSPAKPLNPKKQEHRF RGGGGAAQSRLRRSAAVVPARSLPESSCSSSSSSSSSSNSNSSSSASTSNSNSHSNPS PCSSLGVNMRVTGQCSQGGRKYMEDQFSVAYQESPITHELEYAFFGIYDGHGGPEAAF FAKEHLMLEIVKRKQFWSDRDEDVLTAIREGYIATHFAMWREQENWPRTANGHLSTAG TTATVAFMRREKIYIGHVGDSGIVLGYQNKGERNWRARPLTTDHKPESLAEKTRIQRA GGNVAIKSGVPRVVWNRPRDPMHRGPIRRRTLVDDIPFLAVARSLGDLWSYNSRFKEF VVSPDPDVKVVKIDPSTFRCLIFGTDGLWNVVTAQEAVDSVRKEHLIGEILNEQDVMN PSKALVDQALKTWAAKKMRADNTSVVTVILSPAAHNNATTTTPARSQSALARDTDLEV ELLLEEDDEELPPLDAENNYPDFLIEEDEYVLEQPYSALAKRHLPPEAFRDFDYFGLD EDEPDEDDETVEEEHSEEEELLKPVGLLQQSLFSPRKTWRKSTINNSWSGETEPEPDP DPEPDRLDMYSHTSIDKCAIYADSIVPPVPISPSPAERAENRELSELEQHLESSYSFA ESYNTLLNEQEEQEARSRSAAAAAAAAEQHSSPSVVVDRSMFEIIQEQQHYQQQEGYS LTQLETRRERERLTEASTSSASSSWPQQPAELLELDALLQQERAEEEQVALEQQLQRE QQMEAISSSAEFAAFPVEVADAVEWSAAIEEVEEQKIEVEMEQEKEHVHEQELQDNEV SSTLPATPTLVDPDPKKLQVEMEKKPGLAAVLETVAEIHKEDAHTVHYLFEQIQKLQE TEIAAESPNHQPSGESMSAPRIRQMRRYRNVPNENHQHMQTRRRQMFRHGKPKSLVAY GDGSGTVAAGSSGNPAENRVGGGGSASSGSNSATAATRRRSVASSSGGNVPGSSSSMM MTRRSHSLTASGGVSKRQLRSSLCSLGLQLGLDMTKRTLRTRNVPVSAGSGGAATPVG NSSTSAGGGSSPGGFASPNNPVSTPRGNGAGRLKRSHEDREQRRSLRRSTLSAAASGS GGGGSSSSSNSKPNRLQACNGGAISARPPPSPKKLNAAVPTLAIGTRAYTAALAAAAD HLNKRWSLRSSSGNSGGNLITAISCYSARSRAAAAGGGAAPGSAAGSPGPASLTASPV ATRRR" misc_feature 1415..2350 /gene="Pp2C1" /note="Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence...; Region: PP2Cc; cd00143" /db_xref="CDD:238083" misc_feature order(1448..1450,1460..1465,1535..1543,2162..2164, 2321..2323) /gene="Pp2C1" /note="active site" /db_xref="CDD:238083" polyA_site 5379 /gene="Pp2C1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctatcgtggt atttccgcct actttcacaa cggtcacacg ctttctattt gatttttttt 61 caacacaatt tttgttaaac aatttaccgt gaattttgtt gttgtgtgtg tggatgtgta 121 cgtgctagca accaaaaaag ggaaagaaaa ggggaaaagt gcgcaagtgc tgggcgaaca 181 agcggagaaa caacggcaga aaatgctggc aaacaacaaa tcatcaaggt gaaaccgcgc 241 gccctggcat tgagtcttct tcgtcttcgt cgcaacgggg gcgcaatctg ccccgtgcaa 301 tccagagacc acaggacccg tactccccac tcgaaacaag ggaaaattca tcagttttgg 361 cggccaattg caaacacaaa atactaaata cgctagatgg agcactcaca cacacgggca 421 cagtggcgaa cgtaaataca caacacaaac agacacgggc gtcacgatag tcgtctcgct 481 tgctctgcct gtgagcgccg ggtcggccag agcgagacag agagccaaat cgccttttct 541 tgtactttat atatatatgg tttttattgt ttttttgtgc tgctcccgta cgtgtgtgtg 601 agagtgccaa atgtcatcgg aaattacaac actgcgtgac taggaggaag aagaggaagc 661 aggagcggca ccagcgcaac ggcaacataa acaaaaacaa aagcacagcg gaggagcaac 721 aaataaccga gcgaagatgt tgcccgccaa taataatagg agtagcagca gccatgcgac 781 cacaaccact accaatacca acagatgcct catcaagtcg gccattgaaa gaacggtagt 841 tcggctgaag gagacggccg ccacgtttag cggtaccttc caggatgcgg aggcggatga 901 acagccgtgc ctggaatacg atattatcaa ctactacgcg gataacaagc agcagcagtt 961 gtcctcttct cgccacggcg gcggcagcag caacaataac aataacagtg ggtgccatcc 1021 agcactggat gccagcagca gtagtgttgt tgttgttgtg gcgccggcag cgggaagaga 1081 acaggaactg gaaggggaga gggaagttcc cgtcctggaa gtagcagcgg cagaggagtc 1141 ggaggaaatg gaggtggatg tggagggggg atcaccagcg aagcctttaa acccaaagaa 1201 acaggaacat cgctttcggg gcggcggtgg agcggcacaa agtcgtttgc gccgctcggc 1261 ggccgtcgtt ccagcgcgat cacttccaga gagcagttgt tccagcagca gttccagcag 1321 cagcagcagc aattccaact ccagttccag tgcttccacc tccaattcca actcccattc 1381 caatccctcc ccgtgctcct ccctgggcgt caatatgcgc gtaacgggac aatgcagcca 1441 gggcggtcgg aaatacatgg aagatcagtt ctcggtggcc tatcaagagt cgccgatcac 1501 ccacgaactg gaatatgcat ttttcggcat atacgacggc cacggcggcc ccgaagccgc 1561 cttcttcgcc aaggaacacc tcatgctcga gattgtcaag cggaagcagt tctggtcgga 1621 tcgggatgag gatgtcctaa cggccatacg cgagggctat atcgccacac atttcgccat 1681 gtggcgggag caagaaaact ggccccgcac cgccaatggc cacctgagca ccgctggcac 1741 caccgccaca gtggccttta tgcgtcgcga gaagatctac attggtcatg tgggcgattc 1801 cgggatagtt ttgggctacc agaacaaggg cgaacgcaac tggcgggcac gacctctgac 1861 cacggatcac aagccggaat cgctggccga gaagacgcga atccagcgag ccggcggcaa 1921 tgtggccatc aagtcgggag ttccgcgagt ggtatggaat cgacccaggg atcccatgca 1981 tcgcggtccc attcgtcgga ggactctggt ggacgatata ccctttctgg ccgttgcccg 2041 ttcgctgggc gatctgtgga gctacaattc ccgcttcaag gagtttgtcg tgagtcccga 2101 tccggatgtc aaggtggtta aaatcgatcc cagtaccttt agatgcctaa tcttcggcac 2161 cgacggcctg tggaacgtgg tgaccgccca ggaggcggtg gacagtgtgc gcaaggagca 2221 tctgatcggc gagatactca acgaacagga cgttatgaat cccagcaagg cgctggtgga 2281 tcaggccctc aagacctggg ccgccaagaa gatgcgggcc gacaatacgt ccgttgtgac 2341 tgtgatatta tcgccagctg cccacaataa tgcaaccacc acaacgccgg cgcgttcgca 2401 atcggcgttg gcacgcgata ccgacctgga ggtggaactc ctgctggagg aggacgacga 2461 ggagctgccg ccgctggatg cggagaacaa ttaccccgac tttctgatcg aggaggatga 2521 atatgtgctg gaacagccgt acagtgcctt ggccaagcgg catttgccgc ccgaagcctt 2581 tcgtgatttc gattactttg gcctggacga agatgagccc gatgaggatg acgaaacggt 2641 ggaggaggag cattcggagg aggaggagct gctcaagccg gttggtctct tgcagcagag 2701 tctgtttagt ccgcgcaaaa cgtggcgcaa gtcaacgatt aacaattcct ggagtggcga 2761 aaccgaacct gagcccgatc ccgatcccga accagatcga ttggacatgt attcgcacac 2821 cagcatcgac aagtgcgcca tctacgccga cagcatagtg ccgcccgttc cgataagtcc 2881 aagtccagcg gaaagggctg agaatcgaga gctcagcgaa ctggagcagc atttggagag 2941 tagctatagt tttgccgaat cctacaatac ccttttgaac gagcaggaag agcaggaggc 3001 ccgatcccgc tcagcggcgg ccgctgcagc cgcagccgag cagcattctt cgccatccgt 3061 ggtggtggat cgcagcatgt ttgagattat ccaggagcag cagcactacc agcaacagga 3121 gggctattcg ctgacccagc tggagaccag gcgcgaaagg gagcgtctga ccgaggcatc 3181 cacatcatca gcgtcatcat cgtggcccca acagccggcg gagctgctcg aactggacgc 3241 cctgctgcag caggagcggg ccgaggagga gcaggtggcc ctggagcaac agctgcagcg 3301 cgagcagcaa atggaggcca tcagcagttc ggcggagttt gccgccttcc cagtggaagt 3361 ggccgatgct gttgagtgga gtgcagcgat agaggaagtg gaggagcaga agatagaagt 3421 agaaatggaa caggaaaagg aacatgtaca cgaacaggag ctgcaggaca acgaagtgag 3481 ctccacgctg cccgccacac ccactctagt ggatccagat ccaaaaaagc ttcaagttga 3541 gatggagaag aagccaggac tcgctgccgt tctggaaaca gtggccgaaa tccacaaaga 3601 ggatgcccac actgtgcact atctatttga gcagatccag aagctgcagg aaaccgaaat 3661 cgccgctgaa tcgccgaatc accaaccgag tggcgagtcc atgtccgccc cgcgaatccg 3721 ccaaatgcga cgctatcgca atgtacccaa cgagaatcac cagcacatgc agacgcgtcg 3781 tcgccagatg ttcaggcacg gcaaacccaa gtccctggtg gcctatggcg atggcagtgg 3841 aacagtggca gccggatcat ctgggaatcc ggcagagaat cgagtgggcg gcggtggatc 3901 agcgagcagc ggtagcaatt ccgctacagc cgccactcga cgacgcagcg tggccagttc 3961 gagcggtggc aatgtgcccg gcagcagcag ctccatgatg atgacccgac gcagccacag 4021 cttgacagcc agcggtggcg tgagcaagag gcagctgcgc agcagtctct gcagtttggg 4081 cctgcaactc ggtttggata tgaccaagcg aacgctgagg acgcgaaatg ttccggtttc 4141 agcgggcagc ggaggagcag ccactcccgt tggcaactca tctacgtcag ccggtggagg 4201 cagttctccc ggcggttttg ccagtccaaa caatccagtc agcacgccga ggggaaatgg 4261 agcgggtcgc ctgaagcgca gtcacgagga tcgcgagcag cggaggagcc tgcgacgcag 4321 cactctgagt gccgcggcca gcggaagtgg cggtggagga tcctcctcct cctccaactc 4381 gaaacccaat cgcctgcagg cctgcaatgg aggagccatt tccgcgcgac cgccaccttc 4441 gcccaagaag ctgaatgcag cggtacccac gctggccatt ggaacgcggg cttataccgc 4501 tgctctggcg gcggcggcgg atcacctgaa caagcggtgg tcgctgagga gcagcagcgg 4561 caactccggc ggcaacctga taacagccat tagttgctat agtgccagga gcagggcggc 4621 ggcagcggga ggaggagcag ccccaggatc tgcagcagga tcaccaggac cagcatcttt 4681 aaccgcatcc ccggtggcca cgcgaaggcg ttagaataac aaaaaaaaaa taaaacccaa 4741 aatcaagcgg ggcgagcaac ttgcaagtac aaatcccaag caacggaaaa cctaaaatcc 4801 tagttctact ttatccaaaa tgctaaattg tgtaatctaa cagatttttt tatgtgcaca 4861 acacacacac gcagacatcg gatatatcgt tttattgtat atagaagaag ctatataaac 4921 cacataatat acacacatat ataaatatat ttatacctaa gcctaaacaa taaaacaaat 4981 tcatagtgta gctataaatc gcagttagta tatagtagag atatatatat atattttttg 5041 tattgcctgc agtaagcagt tctccaacat ccgacagttt tcctcaatat aaatgccctt 5101 tttctaatta aatcgattgt gagtttagga accacacaac acaacatcgg aaagtattta 5161 tggtttatat tttttacgct aagttgacta agctagctca taagttaagt taacacgaga 5221 gatgctaatt actttaatca cttacccttc ttttttttgt gcttcgtttg taagacgttt 5281 actacttgcg tttgcgtatt aatttcatgt catcgcgctc acgtgcatta agcattgtca 5341 ttatccaatg aaatacatat gatatttttg cataattaa