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LOCUS XM_017137863 6012 bp mRNA linear INV 09-DEC-2024 (LOC108054789), transcript variant X4, mRNA. ACCESSION XM_017137863 VERSION XM_017137863.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137863.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6012 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6012 /gene="LOC108054789" /note="uncharacterized LOC108054789; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054789" CDS 19..4608 /gene="LOC108054789" /codon_start=1 /product="uncharacterized protein isoform X3" /protein_id="XP_016993352.2" /db_xref="GeneID:108054789" /translation="MMEQGVRNQTTMSTTTNRNRTAGGIEAPSIATASASASASTSAT SAASAASASASSSSSSSVSSATCSATIVQAKQRPPPLKTATTTVTTTLVSSSEGGQPI PPTAHSGGGPGGPGGPGGPGGASGSGSYRGAATLTTPSTPRIELSRASSSSHHEEDSR ESSPENVFEQVGTGTLQETIGLGFREEGALELRSSTEELYFMDPEQKKEEQERIQQQQ QQAKRSSPHIFKFDEHQSYLQQHQRKDSASSEVAALLCISGRTSRISSVGSQGSAVSR LSAISGVSRSPSPHRMLLETSFCGPKPVELGTSSAGGGGGGGSGASTAASSSHSQADG MPGAGTVAANAALLEQLLLARKHDPTQAVLAEGIKVLPPAPATASAPSRSSRSRQPTA NGEQRAAEKVKPTIGGQRRSTKSPGQMVVGKTASGTEYIRINLRPDHMYSDKGIASNE RVVEAPNQLAPVYSKPASLSLQGTGTGGIEEHRLTPTASPKPGRRLTSRSPSPATGGG GGAGSSVSRKSSFSSLFRLGKDSPDSPRETARSRSKSKERPATASAGGAPGGGGSQNV TPSKQKSVLAIFKPGKRGSQSSKSSSPIESSLEPTAPPPPPPAPGSSAAGNRIRTPAG SRPGSRLRYYDEPVEGVIHIPLHTPPEEREARTLLQGIQQLTHAAQASMDPSPLPTHR GSSAAAAQAAGTQITATQLAAAAAALRPVAQRRQVAQRPDLDAIQSLPSQEEPPGMTP GEEQAPVPLQQPRGEQTNWSLEVQRHSSQDSQETTAESVGSVVSARAANLAQQRLPSV ESTQSACEPRLVHTVATVNPAPHPNPDLETAAAKERRRLLFATRLGSGSQEQLFSTQF SISKTESQSSQLSEQVEHSGSETTTTDGLQRQGTVIRRMETSAPPPPPPRGVCSSEEE QGGGSGAGVSGVVMRSKHKSRPSSEDEAAPADLRHSRYLENFDVRRKLHENLTEAERG RVAELPGGGQVTIPRKPKRQSVPESRRETASYSSGTATPTTPTPTPTPLGPVGPAKQP PSAATTPTTGVPAVTSPPAAGTAQASTSAALKESPREPPSHRDQPMPMHDPLTSTTPP NATPPPPERRHSQSTDEHEPIESSESERDSDMAGSSSVTTAVPAGGEAGRRHHNFPRN VCVIEEHESTGLVSQESFEDELPYIPTTLPEERAQGVPIIPMRERANMELKTCPVDRP RSTTPLNPSHLEEYCTGIMTPQEVQPQEIDAPGCVAPVRGEKLRISLPRKESIGKERI QNSKSPRRVSNTSGKSWFEFAEEGLRGNNNLERKDSGKQLLPVVTPPPPPPPAASNLE EPKPKASTQRKLSGHWIDFENIPEKRKPAKRITTLPKETLTSSVAATATTASSAAACG SGHHRSGHHHHHQQLGSKANAEGGDKLHYNYVKPEDCQCECHEAERGESSIGTTGTAG AGGDTSTETGTGTGTGTGSESLASVEILQQGEDMLPLLEPDTSTEGRIYGDEEQVPLV RHSGKGISNPRTQHEEFPRRDDGSSPRNRRFPDRK" misc_feature 2992..>3225 /gene="LOC108054789" /note="multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Region: kgd; cl39092" /db_xref="CDD:476867" ORIGIN 1 cgtgcgtgcg gtctaacgat gatggagcaa ggtgtgcgaa accagacaac gatgtcgacg 61 acgacgaatc gcaatagaac cgccggcggc atagaagcgc ccagcatagc cacggcatcc 121 gcatctgcat ccgcgtccac atccgctaca tccgcagcct ctgcggcatc cgcatccgca 181 tcctcctcct cgtcgtcatc ggtttcatcg gccacttgct cggcaacgat tgtccaggcg 241 aagcagcgac ctccgccttt gaaaacggca acgaccacgg tgaccaccac tttggtgagc 301 agcagcgagg gcggccagcc cataccaccc accgcccatt cgggtggggg tccaggtggt 361 ccaggtggtc ctggaggtcc tggtggtgcc agtgggagtg gcagttatcg cggtgccgcc 421 accctgacca cgccctcaac gccccgcatc gagctaagtc gcgcctccag ttcgtcgcat 481 cacgaggagg acagccggga gagcagtccg gagaatgtat tcgagcaggt cggcactggc 541 accctacagg aaacgattgg ccttggcttt cgggaggagg gcgccctcga gctgcgcagc 601 tccaccgagg agctgtactt catggatccc gagcagaaga aggaggagca ggagcggatc 661 cagcagcagc agcagcaggc caagcgctcc tcgccgcaca tcttcaagtt cgacgagcac 721 cagagctacc tgcagcagca ccagcgcaag gactcggcct cctcggaggt ggcggccctg 781 ctctgcatct cgggtcgcac cagtcgcatc tcgagcgtgg gcagccaggg atcggcggtg 841 agtcgcctgt ccgccatatc gggtgtctcc cgttcgccct cgccgcatcg catgctcctg 901 gagacctcgt tctgcggtcc caagcccgtc gagctgggca cgtcctcagc tggcggagga 961 ggcggaggag gtagtggtgc ctccacggcg gccagttcct cgcacagcca ggcggatgga 1021 atgccgggtg ccggcacagt ggcagccaat gcggcgctat tggagcaact actcttggcc 1081 cgcaaacatg atcccaccca ggcggtgctc gccgagggca tcaaggtcct gccccccgct 1141 cccgctaccg cttccgctcc cagtcgcagc agcaggagca ggcagccaac ggcgaatggt 1201 gaacagaggg cagcggagaa ggtgaagccc acaattggcg gacagcgaag gagcaccaag 1261 agtcccggcc aaatggtggt gggcaagacg gccagcggca cggagtacat aaggatcaat 1321 ctgcggccgg atcacatgta cagcgacaag ggcatcgcct ccaatgagcg ggtggtggag 1381 gcgcccaatc agctggcacc tgtttactcc aagcccgcct cgctgagtct ccagggaacg 1441 ggtaccggtg gcatcgagga gcaccgcctg acgcccacgg cgagtcccaa gccgggcagg 1501 cggctgacca gcaggtcacc ctccccggcc actggaggag gcggcggagc aggttcatcc 1561 gtttctagaa agagctcttt cagtagcctc ttccgcctgg gcaaggactc accggattcg 1621 cccagggaga cggctcgttc gaggagcaaa agcaaagagc gaccggccac cgcctcggca 1681 ggaggtgccc ccggaggagg tggctcccag aacgtaacgc ccagcaagca aaagtccgtg 1741 ctggccatct tcaagccggg caagcggggc agtcagagca gcaagagctc ctcgcccatt 1801 gagagcagct tggagccgac ggcgccaccg ccaccaccgc cggcaccagg ctcctccgcc 1861 gctggcaatc ggattcgcac tccagccggt tcccggccag gatcgcgtct acgctactac 1921 gacgagcccg tggagggggt catacatata ccgctgcata cgccgccgga ggagcgcgaa 1981 gctcgaaccc ttctccaggg catccagcag cttacccatg cggcgcaggc cagcatggat 2041 ccctcgccgc tgcccaccca ccgtggctcc tccgccgccg ctgcccaggc tgcgggaacc 2101 cagatcacgg ccacccagct ggcggcggcg gcggctgcac tgcgtccggt ggcccagcgc 2161 aggcaggtgg cccagcggcc cgatctggat gccatccaat cgctgcccag ccaggaggag 2221 ccgccgggaa tgactccggg agaggagcag gcgcctgtgc cgctccagca gccgcgtgga 2281 gagcagacca actggagcct ggaggtgcag cgacacagct cgcaggactc gcaggagacg 2341 acggccgagt ccgtgggctc ggtggtcagt gccagggccg ccaatctcgc ccagcagcgc 2401 ctgccctcgg tggagagcac gcagagtgcc tgcgagccga gactggtgca cacggtggcc 2461 accgtcaatc cagctcccca tcccaatccc gacctggaga cggcggccgc caaggagcgc 2521 aggcgcctcc tgttcgccac ccgcctgggt tccggcagcc aggagcagct cttctccacc 2581 cagtttagta tctccaagac ggagagccaa tccagtcagc tgtcggagca ggtggagcac 2641 tccggttcgg agacaacgac cacggatggg ttgcagcgcc agggaaccgt aatccggagg 2701 atggagacct cggcacctcc gccgccaccg ccacggggag tctgcagctc ggaggaggag 2761 cagggcggag gatcaggagc aggagtatca ggagtggtga tgcgttccaa gcacaaatcg 2821 cgtcccagtt cggaggacga agctgctccg gcggatctgc gccattcgcg ctacttggag 2881 aacttcgatg tgcgtcgcaa gctgcacgag aatctcacgg aggcggagag gggacgagtg 2941 gccgagctgc caggtggtgg tcaggtcacc attccccgca agccgaagcg tcagagtgtc 3001 ccggaatcaa gacgtgagac cgcaagctat agttctggca cagccacgcc caccactccc 3061 acacccacgc ccacgcccct gggtccagtg ggtccagcca agcagccacc gagcgcagcc 3121 accactccaa ccactggagt tcctgcagtg acctctccac ccgccgccgg caccgctcaa 3181 gcttccacct ccgccgcctt gaaggagtca cccagggagc caccttccca cagggatcaa 3241 cccatgccaa tgcacgatcc tctgacctcc accactccgc cgaatgccac gccgccgccg 3301 ccggaacgtc gtcactcgca gtccacggac gagcacgagc ccatcgagtc gtcggagagc 3361 gaaagggact cggacatggc cggcagctcg tcggtgacca cggcagtgcc ggcgggcgga 3421 gaggccgggc ggcggcacca caactttccg cgcaacgtgt gcgtcatcga ggagcacgag 3481 agcaccggcc tggtgtccca agagtccttc gaggacgagc tgccctacat acccaccacg 3541 ctgcccgagg agcgggccca gggcgtgccc atcatcccga tgcgcgagcg ggccaatatg 3601 gagctgaaga cctgtccggt ggacaggccg cgatccacaa cgccgctgaa tccctcgcat 3661 ctcgaggagt actgcacggg cataatgacg ccgcaggagg tgcagccgca ggagatcgat 3721 gcaccaggct gcgtggctcc ggtgcgcggc gagaagctgc ggatcagcct gccgcgtaag 3781 gagtccatcg gcaaggagcg catccagaac tccaagtcgc cgcgtcgcgt ctccaacacc 3841 agtggcaaat cctggttcga gttcgccgaa gagggtttgc gtggcaacaa caatctggag 3901 cgcaaggact ccggcaagca gctgctcccg gtggtcacgc cacctccgcc gccgccgcct 3961 gctgcctcga atctggagga gcccaagccg aaggcatcca cccagcgaaa gctctccggc 4021 cattggatcg atttcgagaa catacccgag aagcggaagc ccgccaagcg gatcaccacg 4081 ctgcccaagg agacgctgac gagcagtgtg gccgccacgg ccaccaccgc ctcctccgcc 4141 gccgcctgcg gcagtggtca ccaccgctcc ggccaccatc accatcatca gcagctggga 4201 tcgaaggcga atgccgaggg cggcgacaag ctgcactaca actacgtgaa gccggaggac 4261 tgccagtgcg agtgccacga ggcggagcgc ggcgagtcgt cgattggaac gacgggaacg 4321 gcaggagccg gcggagatac cagcacggag acgggcactg gcacgggaac cggaacgggc 4381 agcgagtccc tggcctccgt ggagatactg cagcagggcg aggacatgtt gccgctgctc 4441 gaacccgaca cctcgacgga gggcaggatt tacggggacg aggaacaggt gccactggtg 4501 cgtcactctg gcaagggcat ctccaatccc aggactcaac acgaggagtt tcctcgtcgg 4561 gatgacggat caagtcctcg gaatcgtcgg ttccccgaca gaaagtaagc agtctcattt 4621 cgattctcgg actggatcgg ttctttatat agatcttcag ggtagctaag ccggtaatct 4681 atctctatgt aagtcgagtc actaaactaa gggcctcctg gcctatatcc ttaatgtacc 4741 tcaagcagag tggttgttaa acgttcagag gccgagggac aatgatcgct agacaatgat 4801 gcgtattacc tttcgactcg attactcgta gctaaagaaa aataaacaaa acaagacgta 4861 aacgctatat ggaaactcta tatacaaaac aaaagaaata tactttaaaa ccacatacga 4921 taatatgcat acgatactcg gaacatacga tacatattta gctcatgaat gtacatggtt 4981 agggtaattt ttttgatagc aacaattaca aacactcact ctacatacat atatagcaat 5041 cctgactttt cgctggcaat ttttactata tgtgatctca gataaagtgt tggacatccg 5101 atcggattct ctagctgtaa gtcggtgtat ttgtgtgtag tttgttaact agctccggag 5161 tccggaatcc agaatccaga gtccctaggc ttagtcactc caatcttgac atatatatac 5221 atttgtatat cgtcgtctgt gcccgtttgt gtgtgtgtga gtgtgtgtgt tttggagatc 5281 tataaataga tataactctc tgtaacacca ccttcgcgat ttcgacccat atctctagga 5341 tctcttacga tgaaacacac tgaacgatct atgaaacgag ttgtaatcgt tttcagttga 5401 tcaaagtcaa acaaagcaaa aaaaacacaa aaagtagcct gatgcatagc ctttagttta 5461 gttgagttcg aattcgaagc gttagttagt tagtcagccc cgattttgcc gggcgtgttg 5521 taaatacata agtctaaact agagaacagt attcgataca aagggttttt ggcatttttt 5581 ttccgccaaa agtttgtgaa ctttaaaatg agtttattat atatacatga atattactat 5641 aaagccaaca aactgccagc acacacacac ttgccatagg agaagttcct tttttgcttt 5701 tcgtttttag ttttttcggg ggtaacctgt ttggtgaccc cgaccccggt ttatgcgccc 5761 caagaaatca cgatacgaat acgacctata aactagctta gccgaaagat gttttccctc 5821 acttactatc atacgaagta aaaaaacact acctagctag cctttgaaat tcctaaatac 5881 tttattgaac ttagcggaca acggacattc attgaattga agcaaaatca agcaaataaa 5941 atttaaatta atattaatgc aacttaagga aaaacatata ggtaaattat acaatacata 6001 aactacactc ag