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LOCUS XM_017137862 6291 bp mRNA linear INV 09-DEC-2024 (LOC108054789), transcript variant X3, mRNA. ACCESSION XM_017137862 VERSION XM_017137862.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137862.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6291 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6291 /gene="LOC108054789" /note="uncharacterized LOC108054789; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054789" CDS 298..4887 /gene="LOC108054789" /codon_start=1 /product="uncharacterized protein isoform X3" /protein_id="XP_016993351.2" /db_xref="GeneID:108054789" /translation="MMEQGVRNQTTMSTTTNRNRTAGGIEAPSIATASASASASTSAT SAASAASASASSSSSSSVSSATCSATIVQAKQRPPPLKTATTTVTTTLVSSSEGGQPI PPTAHSGGGPGGPGGPGGPGGASGSGSYRGAATLTTPSTPRIELSRASSSSHHEEDSR ESSPENVFEQVGTGTLQETIGLGFREEGALELRSSTEELYFMDPEQKKEEQERIQQQQ QQAKRSSPHIFKFDEHQSYLQQHQRKDSASSEVAALLCISGRTSRISSVGSQGSAVSR LSAISGVSRSPSPHRMLLETSFCGPKPVELGTSSAGGGGGGGSGASTAASSSHSQADG MPGAGTVAANAALLEQLLLARKHDPTQAVLAEGIKVLPPAPATASAPSRSSRSRQPTA NGEQRAAEKVKPTIGGQRRSTKSPGQMVVGKTASGTEYIRINLRPDHMYSDKGIASNE RVVEAPNQLAPVYSKPASLSLQGTGTGGIEEHRLTPTASPKPGRRLTSRSPSPATGGG GGAGSSVSRKSSFSSLFRLGKDSPDSPRETARSRSKSKERPATASAGGAPGGGGSQNV TPSKQKSVLAIFKPGKRGSQSSKSSSPIESSLEPTAPPPPPPAPGSSAAGNRIRTPAG SRPGSRLRYYDEPVEGVIHIPLHTPPEEREARTLLQGIQQLTHAAQASMDPSPLPTHR GSSAAAAQAAGTQITATQLAAAAAALRPVAQRRQVAQRPDLDAIQSLPSQEEPPGMTP GEEQAPVPLQQPRGEQTNWSLEVQRHSSQDSQETTAESVGSVVSARAANLAQQRLPSV ESTQSACEPRLVHTVATVNPAPHPNPDLETAAAKERRRLLFATRLGSGSQEQLFSTQF SISKTESQSSQLSEQVEHSGSETTTTDGLQRQGTVIRRMETSAPPPPPPRGVCSSEEE QGGGSGAGVSGVVMRSKHKSRPSSEDEAAPADLRHSRYLENFDVRRKLHENLTEAERG RVAELPGGGQVTIPRKPKRQSVPESRRETASYSSGTATPTTPTPTPTPLGPVGPAKQP PSAATTPTTGVPAVTSPPAAGTAQASTSAALKESPREPPSHRDQPMPMHDPLTSTTPP NATPPPPERRHSQSTDEHEPIESSESERDSDMAGSSSVTTAVPAGGEAGRRHHNFPRN VCVIEEHESTGLVSQESFEDELPYIPTTLPEERAQGVPIIPMRERANMELKTCPVDRP RSTTPLNPSHLEEYCTGIMTPQEVQPQEIDAPGCVAPVRGEKLRISLPRKESIGKERI QNSKSPRRVSNTSGKSWFEFAEEGLRGNNNLERKDSGKQLLPVVTPPPPPPPAASNLE EPKPKASTQRKLSGHWIDFENIPEKRKPAKRITTLPKETLTSSVAATATTASSAAACG SGHHRSGHHHHHQQLGSKANAEGGDKLHYNYVKPEDCQCECHEAERGESSIGTTGTAG AGGDTSTETGTGTGTGTGSESLASVEILQQGEDMLPLLEPDTSTEGRIYGDEEQVPLV RHSGKGISNPRTQHEEFPRRDDGSSPRNRRFPDRK" misc_feature 3271..>3504 /gene="LOC108054789" /note="multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Region: kgd; cl39092" /db_xref="CDD:476867" ORIGIN 1 gcgtgcgtgc ggtctaacgg taaacggtgc tcctgcgaga gagggagagc gcgtgtgtgt 61 gtgttcgcca gccagacaga gatagcaata gcagcaagct gaagtgagca gccaaacgca 121 gataaatcaa aaaacgaatg atagaaggca gagtccaaga gaagaggagc agaaatcaca 181 atcacacttg ctggcattta ccgttcaact ttttttttgt gtgcaaattg atgcgaaatt 241 aataaggaca agtaatacac acatacgcac acgtggagag gactttttgg gaccgcgatg 301 atggagcaag gtgtgcgaaa ccagacaacg atgtcgacga cgacgaatcg caatagaacc 361 gccggcggca tagaagcgcc cagcatagcc acggcatccg catctgcatc cgcgtccaca 421 tccgctacat ccgcagcctc tgcggcatcc gcatccgcat cctcctcctc gtcgtcatcg 481 gtttcatcgg ccacttgctc ggcaacgatt gtccaggcga agcagcgacc tccgcctttg 541 aaaacggcaa cgaccacggt gaccaccact ttggtgagca gcagcgaggg cggccagccc 601 ataccaccca ccgcccattc gggtgggggt ccaggtggtc caggtggtcc tggaggtcct 661 ggtggtgcca gtgggagtgg cagttatcgc ggtgccgcca ccctgaccac gccctcaacg 721 ccccgcatcg agctaagtcg cgcctccagt tcgtcgcatc acgaggagga cagccgggag 781 agcagtccgg agaatgtatt cgagcaggtc ggcactggca ccctacagga aacgattggc 841 cttggctttc gggaggaggg cgccctcgag ctgcgcagct ccaccgagga gctgtacttc 901 atggatcccg agcagaagaa ggaggagcag gagcggatcc agcagcagca gcagcaggcc 961 aagcgctcct cgccgcacat cttcaagttc gacgagcacc agagctacct gcagcagcac 1021 cagcgcaagg actcggcctc ctcggaggtg gcggccctgc tctgcatctc gggtcgcacc 1081 agtcgcatct cgagcgtggg cagccaggga tcggcggtga gtcgcctgtc cgccatatcg 1141 ggtgtctccc gttcgccctc gccgcatcgc atgctcctgg agacctcgtt ctgcggtccc 1201 aagcccgtcg agctgggcac gtcctcagct ggcggaggag gcggaggagg tagtggtgcc 1261 tccacggcgg ccagttcctc gcacagccag gcggatggaa tgccgggtgc cggcacagtg 1321 gcagccaatg cggcgctatt ggagcaacta ctcttggccc gcaaacatga tcccacccag 1381 gcggtgctcg ccgagggcat caaggtcctg ccccccgctc ccgctaccgc ttccgctccc 1441 agtcgcagca gcaggagcag gcagccaacg gcgaatggtg aacagagggc agcggagaag 1501 gtgaagccca caattggcgg acagcgaagg agcaccaaga gtcccggcca aatggtggtg 1561 ggcaagacgg ccagcggcac ggagtacata aggatcaatc tgcggccgga tcacatgtac 1621 agcgacaagg gcatcgcctc caatgagcgg gtggtggagg cgcccaatca gctggcacct 1681 gtttactcca agcccgcctc gctgagtctc cagggaacgg gtaccggtgg catcgaggag 1741 caccgcctga cgcccacggc gagtcccaag ccgggcaggc ggctgaccag caggtcaccc 1801 tccccggcca ctggaggagg cggcggagca ggttcatccg tttctagaaa gagctctttc 1861 agtagcctct tccgcctggg caaggactca ccggattcgc ccagggagac ggctcgttcg 1921 aggagcaaaa gcaaagagcg accggccacc gcctcggcag gaggtgcccc cggaggaggt 1981 ggctcccaga acgtaacgcc cagcaagcaa aagtccgtgc tggccatctt caagccgggc 2041 aagcggggca gtcagagcag caagagctcc tcgcccattg agagcagctt ggagccgacg 2101 gcgccaccgc caccaccgcc ggcaccaggc tcctccgccg ctggcaatcg gattcgcact 2161 ccagccggtt cccggccagg atcgcgtcta cgctactacg acgagcccgt ggagggggtc 2221 atacatatac cgctgcatac gccgccggag gagcgcgaag ctcgaaccct tctccagggc 2281 atccagcagc ttacccatgc ggcgcaggcc agcatggatc cctcgccgct gcccacccac 2341 cgtggctcct ccgccgccgc tgcccaggct gcgggaaccc agatcacggc cacccagctg 2401 gcggcggcgg cggctgcact gcgtccggtg gcccagcgca ggcaggtggc ccagcggccc 2461 gatctggatg ccatccaatc gctgcccagc caggaggagc cgccgggaat gactccggga 2521 gaggagcagg cgcctgtgcc gctccagcag ccgcgtggag agcagaccaa ctggagcctg 2581 gaggtgcagc gacacagctc gcaggactcg caggagacga cggccgagtc cgtgggctcg 2641 gtggtcagtg ccagggccgc caatctcgcc cagcagcgcc tgccctcggt ggagagcacg 2701 cagagtgcct gcgagccgag actggtgcac acggtggcca ccgtcaatcc agctccccat 2761 cccaatcccg acctggagac ggcggccgcc aaggagcgca ggcgcctcct gttcgccacc 2821 cgcctgggtt ccggcagcca ggagcagctc ttctccaccc agtttagtat ctccaagacg 2881 gagagccaat ccagtcagct gtcggagcag gtggagcact ccggttcgga gacaacgacc 2941 acggatgggt tgcagcgcca gggaaccgta atccggagga tggagacctc ggcacctccg 3001 ccgccaccgc cacggggagt ctgcagctcg gaggaggagc agggcggagg atcaggagca 3061 ggagtatcag gagtggtgat gcgttccaag cacaaatcgc gtcccagttc ggaggacgaa 3121 gctgctccgg cggatctgcg ccattcgcgc tacttggaga acttcgatgt gcgtcgcaag 3181 ctgcacgaga atctcacgga ggcggagagg ggacgagtgg ccgagctgcc aggtggtggt 3241 caggtcacca ttccccgcaa gccgaagcgt cagagtgtcc cggaatcaag acgtgagacc 3301 gcaagctata gttctggcac agccacgccc accactccca cacccacgcc cacgcccctg 3361 ggtccagtgg gtccagccaa gcagccaccg agcgcagcca ccactccaac cactggagtt 3421 cctgcagtga cctctccacc cgccgccggc accgctcaag cttccacctc cgccgccttg 3481 aaggagtcac ccagggagcc accttcccac agggatcaac ccatgccaat gcacgatcct 3541 ctgacctcca ccactccgcc gaatgccacg ccgccgccgc cggaacgtcg tcactcgcag 3601 tccacggacg agcacgagcc catcgagtcg tcggagagcg aaagggactc ggacatggcc 3661 ggcagctcgt cggtgaccac ggcagtgccg gcgggcggag aggccgggcg gcggcaccac 3721 aactttccgc gcaacgtgtg cgtcatcgag gagcacgaga gcaccggcct ggtgtcccaa 3781 gagtccttcg aggacgagct gccctacata cccaccacgc tgcccgagga gcgggcccag 3841 ggcgtgccca tcatcccgat gcgcgagcgg gccaatatgg agctgaagac ctgtccggtg 3901 gacaggccgc gatccacaac gccgctgaat ccctcgcatc tcgaggagta ctgcacgggc 3961 ataatgacgc cgcaggaggt gcagccgcag gagatcgatg caccaggctg cgtggctccg 4021 gtgcgcggcg agaagctgcg gatcagcctg ccgcgtaagg agtccatcgg caaggagcgc 4081 atccagaact ccaagtcgcc gcgtcgcgtc tccaacacca gtggcaaatc ctggttcgag 4141 ttcgccgaag agggtttgcg tggcaacaac aatctggagc gcaaggactc cggcaagcag 4201 ctgctcccgg tggtcacgcc acctccgccg ccgccgcctg ctgcctcgaa tctggaggag 4261 cccaagccga aggcatccac ccagcgaaag ctctccggcc attggatcga tttcgagaac 4321 atacccgaga agcggaagcc cgccaagcgg atcaccacgc tgcccaagga gacgctgacg 4381 agcagtgtgg ccgccacggc caccaccgcc tcctccgccg ccgcctgcgg cagtggtcac 4441 caccgctccg gccaccatca ccatcatcag cagctgggat cgaaggcgaa tgccgagggc 4501 ggcgacaagc tgcactacaa ctacgtgaag ccggaggact gccagtgcga gtgccacgag 4561 gcggagcgcg gcgagtcgtc gattggaacg acgggaacgg caggagccgg cggagatacc 4621 agcacggaga cgggcactgg cacgggaacc ggaacgggca gcgagtccct ggcctccgtg 4681 gagatactgc agcagggcga ggacatgttg ccgctgctcg aacccgacac ctcgacggag 4741 ggcaggattt acggggacga ggaacaggtg ccactggtgc gtcactctgg caagggcatc 4801 tccaatccca ggactcaaca cgaggagttt cctcgtcggg atgacggatc aagtcctcgg 4861 aatcgtcggt tccccgacag aaagtaagca gtctcatttc gattctcgga ctggatcggt 4921 tctttatata gatcttcagg gtagctaagc cggtaatcta tctctatgta agtcgagtca 4981 ctaaactaag ggcctcctgg cctatatcct taatgtacct caagcagagt ggttgttaaa 5041 cgttcagagg ccgagggaca atgatcgcta gacaatgatg cgtattacct ttcgactcga 5101 ttactcgtag ctaaagaaaa ataaacaaaa caagacgtaa acgctatatg gaaactctat 5161 atacaaaaca aaagaaatat actttaaaac cacatacgat aatatgcata cgatactcgg 5221 aacatacgat acatatttag ctcatgaatg tacatggtta gggtaatttt tttgatagca 5281 acaattacaa acactcactc tacatacata tatagcaatc ctgacttttc gctggcaatt 5341 tttactatat gtgatctcag ataaagtgtt ggacatccga tcggattctc tagctgtaag 5401 tcggtgtatt tgtgtgtagt ttgttaacta gctccggagt ccggaatcca gaatccagag 5461 tccctaggct tagtcactcc aatcttgaca tatatataca tttgtatatc gtcgtctgtg 5521 cccgtttgtg tgtgtgtgag tgtgtgtgtt ttggagatct ataaatagat ataactctct 5581 gtaacaccac cttcgcgatt tcgacccata tctctaggat ctcttacgat gaaacacact 5641 gaacgatcta tgaaacgagt tgtaatcgtt ttcagttgat caaagtcaaa caaagcaaaa 5701 aaaacacaaa aagtagcctg atgcatagcc tttagtttag ttgagttcga attcgaagcg 5761 ttagttagtt agtcagcccc gattttgccg ggcgtgttgt aaatacataa gtctaaacta 5821 gagaacagta ttcgatacaa agggtttttg gcattttttt tccgccaaaa gtttgtgaac 5881 tttaaaatga gtttattata tatacatgaa tattactata aagccaacaa actgccagca 5941 cacacacact tgccatagga gaagttcctt ttttgctttt cgtttttagt tttttcgggg 6001 gtaacctgtt tggtgacccc gaccccggtt tatgcgcccc aagaaatcac gatacgaata 6061 cgacctataa actagcttag ccgaaagatg ttttccctca cttactatca tacgaagtaa 6121 aaaaacacta cctagctagc ctttgaaatt cctaaatact ttattgaact tagcggacaa 6181 cggacattca ttgaattgaa gcaaaatcaa gcaaataaaa tttaaattaa tattaatgca 6241 acttaaggaa aaacatatag gtaaattata caatacataa actacactca g