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LOCUS XM_017137857 2904 bp mRNA linear INV 09-DEC-2024 (Hinfp), mRNA. ACCESSION XM_017137857 VERSION XM_017137857.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137857.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2904 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2904 /gene="Hinfp" /note="Histone H4 transcription factor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054787" CDS 150..1574 /gene="Hinfp" /codon_start=1 /product="histone H4 transcription factor" /protein_id="XP_016993346.2" /db_xref="GeneID:108054787" /translation="MLRPQPPPMPLPQPPGKRKKPAELQLACGWRGCQEICTGEWSLN GHIAEHLEQYAREQDRRAVADQADHKTEHQCTWNACDFATANLVEFERHSYYHGYYLH LLLQGQLECDLHPEIPACTAPARLADKLPHLGQNFRCGWTDCEREFVSIVEFQDHIVK HALFEYDIQKTPEDERPKTMCNWTMCHKHMGNKYRLIEHISTHSNKKQVACFHCGELF RTKTTLFDHLRRQPENNTNNFQCAQCFKFFATKKLLKSHVVRHVNCYKCTMCDMTCSS ASSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKHVQIVHSKTVHQCEHPDCHYSVR TFTQMRRHFLEVHGNNPILYACHCCERFFKSGKSLSAHLIKKHGFRLPSGHKRFTYRV DENGFYRLETTRIESLEVTQQILSPQVNVSLEIDLKPGTGTCYEIVDPTNAEFERIIV SNDPHEAQLMGEVVISLPSLTEEL" misc_feature 705..758 /gene="Hinfp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 780..836 /gene="Hinfp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 870..932 /gene="Hinfp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(885..887,891..893,897..899,903..908,915..920, 927..929,963..965,969..971,981..986,993..998,1008..1010, 1050..1052,1056..1058,1062..1064,1068..1073,1080..1085, 1092..1094) /gene="Hinfp" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 948..1013 /gene="Hinfp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1035..1094 /gene="Hinfp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1215..1268 /gene="Hinfp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 2904 /gene="Hinfp" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgataggcgc agtgcgtcct gtcgatatca ggtggcccac tttgcccagt aggaccgtac 61 tcgggagcaa gaattgagcc agattttggg cctaggcgac cgaatccccg ccagaatcac 121 cagaatcgtg agcaccgcca gaaccagcca tgttgagacc ccagccgcca ccgatgccgc 181 tgccccagcc gccggggaag cgcaaaaagc ccgcggaact gcagttggcc tgcggatggc 241 gcggctgcca ggagatttgc acgggcgaat ggagtctcaa tgggcacatt gccgagcatc 301 tggagcagta tgcccgcgag caggaccgcc gggcggtggc ggatcaggcg gaccataaaa 361 cggagcacca gtgcacctgg aacgcctgcg acttcgccac cgccaacctg gtggagttcg 421 agcggcactc gtactaccac ggctactacc tgcacctcct gctgcagggc cagctggagt 481 gcgacctgca tccggagatc cccgcctgca cggcgcccgc ccgcctcgcg gacaagctgc 541 cccatttggg ccagaacttc cgctgcggct ggacggactg cgagcgcgag ttcgtctcga 601 ttgtcgagtt ccaggaccac atcgtcaagc acgccctctt cgagtacgac atacagaaga 661 cgcccgagga cgagcggccc aagaccatgt gcaactggac catgtgccac aagcacatgg 721 gcaacaagta ccgcctcatc gagcacatca gcacccactc gaacaagaag caggtggcct 781 gcttccactg cggcgagctg ttccgcacca agacgacgct cttcgaccac ctgcgccgcc 841 agccggagaa caacaccaac aactttcagt gcgcccagtg cttcaagttc ttcgccacca 901 agaagctgct gaagagccat gtggtgcggc acgtgaactg ctacaagtgc accatgtgcg 961 acatgacctg cagctcggcc agctcgctga ccacccacat ccggtatcgc cacctcaagg 1021 acaagccctt gaagtgcagc gagtgcgata cgcgctgcgt ccgggaatcg gatctcgcca 1081 agcacgtcca gatagtccac tcgaagacgg tgcaccagtg cgagcatccc gactgccact 1141 actcggtgcg caccttcacg cagatgcgaa ggcactttct ggaggtgcac ggcaataatc 1201 ccattctgta cgcctgccac tgctgcgagc gcttcttcaa gagcggcaag tccctgtccg 1261 cccacctgat caagaagcac ggcttccggc tgccgtcggg ccacaagaga ttcacctacc 1321 gggtggacga gaacggattc taccgcctgg agacgacgcg catcgagagt ctggaggtga 1381 cgcagcaaat actgtcgccg caggtgaacg tctcgctgga gatcgacctg aagccgggca 1441 ccggcacctg ctacgagatc gtggacccca caaacgccga gttcgagcgc atcatcgtct 1501 cgaacgatcc gcacgaggcg cagctgatgg gcgaggtggt catctcgctg cccagcctga 1561 cggaggagct gtgaggaagg cgcaaccgac gcaaggcagc caacactttt gatctcgtgt 1621 gccccctccc atttcagttt agacttaggt agcaaatagg ataggatgcg gataggatgt 1681 cataacgccc aggggcgcaa tgcccatcaa aatcgagggg taaccattta actttgtgta 1741 ataactatcc tataagtagg tatttttcta tctagggttt atttttcacc ttttcctaat 1801 ttgttcaaaa tgttctctac gaaaaatata cactaaaatc atattaggtt aatattatat 1861 ttttagaagc tagggaattt agtaaaatat tccttctgcc ctgtgtccaa tttctgtttt 1921 aacttatcct attatcttaa atacgaattg cacaatcaag ttagacttat atcaaaactg 1981 ggcgctatgt catcaccggc aaatgcattg attctgtacc atcatatctc caaactatta 2041 ttattattat tttagactgt atgtgcgtgc ctgcccctct atgtgtgtga aatgtctgtg 2101 agtggttggc attatctatc ccggatcggg atccattcgt catttagtcc taagcattct 2161 gacagtttcc agtagcaact ttattgttta aggtgtctag ccaataaaga aagaaagcct 2221 aaagaattcg aattattttc ctcttgaaaa aagaatatgc ttcggtgttt cttaactatt 2281 tgacgatgat aacgataagg ataattaaat gtttgggagg ggaacctctt tacaatgaac 2341 ctctaataaa ataaagcaaa tatgaagaat attattcagt gcatcatagc taatgtcaaa 2401 aaacataaat ggaaataact aaattaccaa caaaactgtg caaataagta ataattctaa 2461 aaaagacgct gcataatgta tcaaaagcta atatatcgtt cttataaaga aggattctcc 2521 tatgcatttc catcctattt attatagaga acatatttta taggcgaaat ataccttctc 2581 agctctaaat aaatttttac ccatcctaag gctaggtatt ccactttctt aactctattt 2641 cctggccatt tgtttgaggt tagcttcctc ggcacttgaa aaaaataaac acatgatagt 2701 tgtggttttt aaaagatttt ttgttgttta attctgggat gcttagactc gctctcaagt 2761 aacgacgaca tatatatggt attgttggtc tatatagata tatgtgtttc acaccggaaa 2821 aaaataaaaa acacaacgcg gcgctccaaa tgcttttccg attccgatac cgattccgga 2881 ttccgaacta tcggctgggt tccg