Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017137856 4664 bp mRNA linear INV 09-DEC-2024 (spoon), transcript variant X2, mRNA. ACCESSION XM_017137856 VERSION XM_017137856.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137856.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4664 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4664 /gene="spoon" /note="A-kinase anchor protein spoonbill; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108054786" CDS 44..1852 /gene="spoon" /codon_start=1 /product="A-kinase anchor protein 1, mitochondrial" /protein_id="XP_016993345.2" /db_xref="GeneID:108054786" /translation="MVSGRPLLYLSLPGVAFILGVFWFRRRNKNRLDKPDDEDTSAVK DSSIEPTVQARKANGVLQNGKLPQQPASKSMNINGTIANGSGSGSGSGGSNSGSGSDE KDSPTTMLYGKSAPIKIQSNGRSSNGKHQQQIDSEMLKSKIQDAEHKKLCSIDEDFEN LSSPRDLPDSVNTRVSFYNRKASQKTVEPVVIKATRTPKISPENSFLDTNYTTKEECE QNNNCEPKEKENDKVSKAEATGEQQQEHEQEQEQEQTVLKEELVDSNGNQKRNVDAAS PSLSICSVQSGDSGKGSSLPRSEATRVKTSYEFLFPISLIGHLYGRKRAFINQIKAKT LASVALSKNPYSGKVRICTIEGTESEIDAALAMIRQRLPAKRYPNFTMQRIHFALPQT IVPLSTESLYNLQLKLIEGINNDVVVSAVLSGSHVFIQHPLHPSHPSLPMLQKQLYDS YSNMESPQLPSLEISAVCVIPINGVWYRVQIVDTDAEDEERCLVKFLDFGGYMNVGFS TLRQIRTDFMSVPFQATECILSNIEPIGETWSIEAAEILNQLTKGIVLQAQVAGYNSH NIPEIYLFASLGPNNVIFINKELVARNLAKWVEMRD" misc_feature 959..1162 /gene="spoon" /note="K homology (KH) RNA-binding domain, type I; Region: KH-I; cl00098" /db_xref="CDD:469614" misc_feature 1418..1645 /gene="spoon" /note="Tudor domain found in mitochondrial A-kinase anchor protein 1 (AKAP1) and similar proteins; Region: Tudor_AKAP1; cd20407" /db_xref="CDD:410478" misc_feature order(1457..1459,1472..1474,1529..1531,1538..1540, 1544..1546) /gene="spoon" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:410478" polyA_site 4664 /gene="spoon" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgatatacaa cttagttaaa agatccttca atattcagcg aaaatggtat ccggtcgtcc 61 tctactctac ctctcactgc ccggtgtagc atttatactc ggcgtctttt ggtttcggcg 121 tagaaataaa aatcgtttag acaagcccga tgacgaggac acatcggccg tcaaggactc 181 gtcgattgag cccactgtgc aggcgcgcaa ggccaatgga gtcctgcaga atggcaagct 241 gccacagcag ccggccagca agtcgatgaa catcaacgga accatagcca atggaagcgg 301 aagtggaagt ggaagcggtg gcagcaatag cggaagcggc agcgatgaaa aggatagtcc 361 caccaccatg ttgtatggca aatccgcacc catcaaaatc cagagcaatg gacgctcctc 421 aaatggcaag catcagcagc agatcgattc cgaaatgcta aagtcaaaga ttcaggatgc 481 cgagcacaag aaactgtgct ccatagacga ggatttcgag aatctatcgt cgccgcgtga 541 tttgcccgat tcggtgaata cacgcgtgtc cttctataat cgcaaggcca gccaaaagac 601 agtggaaccg gtggtgatca aggccacgcg cacgcccaag atatcgccgg agaactcgtt 661 cctggacacc aactacacca ccaaggagga gtgcgagcag aacaataact gtgagcccaa 721 ggagaaggag aacgataagg tctccaaggc ggaggccact ggggaacagc agcaggagca 781 tgagcaggag caggagcagg agcagacggt gctgaaggag gagctggtgg acagcaatgg 841 caatcagaag cgcaacgtgg acgcggccag cccctcgctg agcatttgca gcgtccagtc 901 gggcgattcc ggcaagggat ccagcctgcc ccgctcggag gcgacacgcg tgaagaccag 961 ctacgagttc ctcttcccca tcagcctgat cggtcacctg tacggccgca agcgggcctt 1021 cattaaccaa atcaaggcca agaccctggc cagcgtggcc ctgagcaaga atccctattc 1081 gggcaaggtg cgcatctgca ccatcgaggg aacggagagc gaaatcgacg ccgcactggc 1141 catgatccgt cagcgtttgc cggccaagcg gtatcccaac ttcaccatgc aacgcatcca 1201 ctttgcgctt ccccagacca tagttcctct ttcgaccgaa agcctctaca atctacaact 1261 gaaactgatc gagggcatca acaacgatgt ggtggtgagt gcggtgctct ccgggtcgca 1321 tgtgttcatc cagcacccgc tgcatccctc gcatccatcg ctgcccatgc tgcagaagca 1381 gctgtacgac agctactcca acatggagtc gccccagctg cccagcttgg agatcagtgc 1441 cgtgtgcgtg atacccatca atggggtgtg gtatcgcgtc cagatcgtgg acacggatgc 1501 cgaggacgag gagcgttgcc tggtcaagtt cctcgacttt ggtggctaca tgaatgtcgg 1561 cttcagcaca ctgcgccaga tccgcaccga tttcatgagt gtgcccttcc aggccactga 1621 atgcatcctg tccaacattg agcccatcgg tgagacctgg tccatcgagg cggccgaaat 1681 cctcaaccaa ctaaccaaag gcattgtctt gcaagcccaa gtcgccggct acaatagtca 1741 caacatacca gaaatctatt tattcgcttc tctaggtccc aataatgtaa tctttatcaa 1801 taaggaactg gtcgccagga acctcgcgaa gtgggtggag atgcgtgact aacagccttc 1861 gtgaacaact caactagtaa ccaagaacta tatgaaatct aaaagcaaac ttaaacaaca 1921 atcactcaaa cccaaatcaa gcaacttggc agtgcaacaa aggaatgctt gagtctagtg 1981 cagcgggctc caaaaggtga agaagaattc ggatcacgga ttgcggatgc agcttttaca 2041 gatagcatgt agcacatagc atatagcaga tggcagattg caaaggaact gccaaattgc 2101 agaggccccc aaacaaaaca aaagataaca aacacgttcg ttaagttgta gaatgcgact 2161 gagcctagaa ggggagagcc ccttgatcat tacataacaa acaacaaaca acaagcaaca 2221 cccaatcgca aaatacacac acgcatatat gaataagagc acctaacacc tcactaaccc 2281 acagacacac acgcattaca cacaaccagg caaacgtttg tttgttgact gcccaggatt 2341 ggataccaaa atggggggga taaaggggga tgggggaaga tcagctagat gggtatgatt 2401 tgtgaccact ttggcggcac caacgggcgg gcgggcatcc tacggatcgg ctagaactgt 2461 cggacttgag aacgaaccgc ttaagatatt accatactca gtttataagt agccagtact 2521 acctagtgta aatagttttt ataaatttaa caaaatgcta aaacaaaaat acactaaata 2581 taaactaaac gtaaaatatc aagcgttcat cagatataaa gaaaaataaa caaaacaaac 2641 aaaaacaaag aaaatccaca aaaaaaaaac aaacaaattt caatatatat cttggcaaaa 2701 gtagagaaaa acctgatata attttaattt tatgttgctg tttgctgaga tctgtaaata 2761 ttataatagg cttttttaaa actgataact gataatatct gaacgatcat tttatatatt 2821 tacatgcatt atatatcttt tgtttaattt gtattcatac tgaaactact caaaccgcga 2881 aaagtacaag attacttcga acagctgaaa gtaagatgga gatgatgatg gagttacaga 2941 aaacagaaaa gggaaactag aagagaagca acccctcacc tcacctcaac acccgcacta 3001 aagccgcaga atgcctaact atgaaaaacc acttgaaaaa cagacaaatt aacgttacaa 3061 attctaaata tctatatatg cgtgtgtgcc attgttagtc aacaaacaaa cataaaacaa 3121 agcaaaaaca aaaaaacaga aaaacctatt aagcaaaaaa gaatggatac ttttccccaa 3181 caacccattg taaataaaat ccattttgac agacaaagaa atgcaaagaa aaacacaaaa 3241 aaaaacaata attgttgcta ccaaaactag cctattgaaa aacggagtga aaacctctaa 3301 atgcctttct ttcaaaatta ttttgtatat gcaacgagaa ctatctcttg aaagcaagca 3361 agggaaattg ttgcaaacta atcgcttacc agttagttac caattctggg tgtctagcct 3421 agcagcaatt ttaggtagaa ttgttctaag atgcagcaca accacaaaaa cagcaaaaac 3481 aagaacaaca acaacacatc aataacacag taacacacta accaacctac caaccatgtt 3541 aaccatattt atttagttca gaagaagagt tttatttttc aaaaaatgta tttcacattg 3601 agaaaataga tcggcagcaa cggaaacaat atatataaat cattaatgaa gatttcaaga 3661 tcgtaaagag cataattcag tttgatagtc gtcgtcattg ttctcattgt cgtcatcgtc 3721 ataaataaat aacttagtta atataacgta caagtgatga tccacacaca tatatatata 3781 catatatatc tatctatttt gtcaacatga aagacttggc gtgttattct tcttctacga 3841 tagtttacta ctattattat tatcgctatc attatatcat tattattatt attacgacgc 3901 cttttttttg ctgtttgttt ctagttcttt cgtgcgtaat taatttacca tttacttgct 3961 aatttaaagt aattcattct tattgttatc ttaaaacatt attgacttga tcaacttttg 4021 gaggggccaa ggaggttttt ggcggggggg atgggaggat ctcgagatcc caagttcccc 4081 ccttcgcccc ctcccgctgc cttccacact ctagtgcaaa ttcgtttaat ggatccttgt 4141 tttagtgtcg cctttgaaaa ttctttcgag agaaaaatac attttagcct atggaacact 4201 acttatacta ttggttactt ttaaatgaga aacattaaac actattctag gtcaaagtct 4261 aatttcaatt tgtattcgcc agagttgtca acgttctcgg tgttttatcg aattcattgt 4321 agatttgtca cttgtacaat tgttgataaa ctgattaact gataactgat taactgacat 4381 agagataatg caaatgcaaa tgcaaacaca acagacatga tgtagagcac atattgaaac 4441 taatcttagt ggatagcgtt ggatagcgag aagagtgtcc tcccttaaag atcatcgtat 4501 gtgtgtggta cttctatttt ttttcttatc tagtaatgct gggaggacaa gagttacgaa 4561 taagatttaa tttatagacg cattaaagtg agaataattt acaaatctag ttattaacta 4621 aatataatgc aagtacatta aaataaaaca ttattgaaaa ggaa