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LOCUS XM_017137855 5026 bp mRNA linear INV 09-DEC-2024 (spoon), transcript variant X1, mRNA. ACCESSION XM_017137855 VERSION XM_017137855.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137855.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5026 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5026 /gene="spoon" /note="A-kinase anchor protein spoonbill; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108054786" CDS 406..2214 /gene="spoon" /codon_start=1 /product="A-kinase anchor protein 1, mitochondrial" /protein_id="XP_016993344.2" /db_xref="GeneID:108054786" /translation="MVSGRPLLYLSLPGVAFILGVFWFRRRNKNRLDKPDDEDTSAVK DSSIEPTVQARKANGVLQNGKLPQQPASKSMNINGTIANGSGSGSGSGGSNSGSGSDE KDSPTTMLYGKSAPIKIQSNGRSSNGKHQQQIDSEMLKSKIQDAEHKKLCSIDEDFEN LSSPRDLPDSVNTRVSFYNRKASQKTVEPVVIKATRTPKISPENSFLDTNYTTKEECE QNNNCEPKEKENDKVSKAEATGEQQQEHEQEQEQEQTVLKEELVDSNGNQKRNVDAAS PSLSICSVQSGDSGKGSSLPRSEATRVKTSYEFLFPISLIGHLYGRKRAFINQIKAKT LASVALSKNPYSGKVRICTIEGTESEIDAALAMIRQRLPAKRYPNFTMQRIHFALPQT IVPLSTESLYNLQLKLIEGINNDVVVSAVLSGSHVFIQHPLHPSHPSLPMLQKQLYDS YSNMESPQLPSLEISAVCVIPINGVWYRVQIVDTDAEDEERCLVKFLDFGGYMNVGFS TLRQIRTDFMSVPFQATECILSNIEPIGETWSIEAAEILNQLTKGIVLQAQVAGYNSH NIPEIYLFASLGPNNVIFINKELVARNLAKWVEMRD" misc_feature 1321..1524 /gene="spoon" /note="K homology (KH) RNA-binding domain, type I; Region: KH-I; cl00098" /db_xref="CDD:469614" misc_feature 1780..2007 /gene="spoon" /note="Tudor domain found in mitochondrial A-kinase anchor protein 1 (AKAP1) and similar proteins; Region: Tudor_AKAP1; cd20407" /db_xref="CDD:410478" misc_feature order(1819..1821,1834..1836,1891..1893,1900..1902, 1906..1908) /gene="spoon" /note="putative peptide binding site [polypeptide binding]; other site" /db_xref="CDD:410478" polyA_site 5026 /gene="spoon" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgacccgatg accagactcc gcacacgttt ttttcggctt tgtgcaagca attcgagtgc 61 aattcccaaa ttccaaccga aaaccccctg agaagtgcgc ggcgcctgca aatcggccaa 121 ctgcgaggtg attccccgcg aggcagacaa tcgccccggt ttcggcgcag cctggccaca 181 ctgccgcacg ccggccatgt tattgtgatt tgtaaaaggt ggaactagac acgtgtttaa 241 ttcgggcagc ccagcgttga gaaatcgcca gtgaatcgcc agcagacaca caaaaagacc 301 acgcagaact cgcgagtgca ttgcattgta ttgaaaacac ccgaaatcag tgggcaaaat 361 aagttatcca ggcggtggcg agagatcctt caatattcag cgaaaatggt atccggtcgt 421 cctctactct acctctcact gcccggtgta gcatttatac tcggcgtctt ttggtttcgg 481 cgtagaaata aaaatcgttt agacaagccc gatgacgagg acacatcggc cgtcaaggac 541 tcgtcgattg agcccactgt gcaggcgcgc aaggccaatg gagtcctgca gaatggcaag 601 ctgccacagc agccggccag caagtcgatg aacatcaacg gaaccatagc caatggaagc 661 ggaagtggaa gtggaagcgg tggcagcaat agcggaagcg gcagcgatga aaaggatagt 721 cccaccacca tgttgtatgg caaatccgca cccatcaaaa tccagagcaa tggacgctcc 781 tcaaatggca agcatcagca gcagatcgat tccgaaatgc taaagtcaaa gattcaggat 841 gccgagcaca agaaactgtg ctccatagac gaggatttcg agaatctatc gtcgccgcgt 901 gatttgcccg attcggtgaa tacacgcgtg tccttctata atcgcaaggc cagccaaaag 961 acagtggaac cggtggtgat caaggccacg cgcacgccca agatatcgcc ggagaactcg 1021 ttcctggaca ccaactacac caccaaggag gagtgcgagc agaacaataa ctgtgagccc 1081 aaggagaagg agaacgataa ggtctccaag gcggaggcca ctggggaaca gcagcaggag 1141 catgagcagg agcaggagca ggagcagacg gtgctgaagg aggagctggt ggacagcaat 1201 ggcaatcaga agcgcaacgt ggacgcggcc agcccctcgc tgagcatttg cagcgtccag 1261 tcgggcgatt ccggcaaggg atccagcctg ccccgctcgg aggcgacacg cgtgaagacc 1321 agctacgagt tcctcttccc catcagcctg atcggtcacc tgtacggccg caagcgggcc 1381 ttcattaacc aaatcaaggc caagaccctg gccagcgtgg ccctgagcaa gaatccctat 1441 tcgggcaagg tgcgcatctg caccatcgag ggaacggaga gcgaaatcga cgccgcactg 1501 gccatgatcc gtcagcgttt gccggccaag cggtatccca acttcaccat gcaacgcatc 1561 cactttgcgc ttccccagac catagttcct ctttcgaccg aaagcctcta caatctacaa 1621 ctgaaactga tcgagggcat caacaacgat gtggtggtga gtgcggtgct ctccgggtcg 1681 catgtgttca tccagcaccc gctgcatccc tcgcatccat cgctgcccat gctgcagaag 1741 cagctgtacg acagctactc caacatggag tcgccccagc tgcccagctt ggagatcagt 1801 gccgtgtgcg tgatacccat caatggggtg tggtatcgcg tccagatcgt ggacacggat 1861 gccgaggacg aggagcgttg cctggtcaag ttcctcgact ttggtggcta catgaatgtc 1921 ggcttcagca cactgcgcca gatccgcacc gatttcatga gtgtgccctt ccaggccact 1981 gaatgcatcc tgtccaacat tgagcccatc ggtgagacct ggtccatcga ggcggccgaa 2041 atcctcaacc aactaaccaa aggcattgtc ttgcaagccc aagtcgccgg ctacaatagt 2101 cacaacatac cagaaatcta tttattcgct tctctaggtc ccaataatgt aatctttatc 2161 aataaggaac tggtcgccag gaacctcgcg aagtgggtgg agatgcgtga ctaacagcct 2221 tcgtgaacaa ctcaactagt aaccaagaac tatatgaaat ctaaaagcaa acttaaacaa 2281 caatcactca aacccaaatc aagcaacttg gcagtgcaac aaaggaatgc ttgagtctag 2341 tgcagcgggc tccaaaaggt gaagaagaat tcggatcacg gattgcggat gcagctttta 2401 cagatagcat gtagcacata gcatatagca gatggcagat tgcaaaggaa ctgccaaatt 2461 gcagaggccc ccaaacaaaa caaaagataa caaacacgtt cgttaagttg tagaatgcga 2521 ctgagcctag aaggggagag ccccttgatc attacataac aaacaacaaa caacaagcaa 2581 cacccaatcg caaaatacac acacgcatat atgaataaga gcacctaaca cctcactaac 2641 ccacagacac acacgcatta cacacaacca ggcaaacgtt tgtttgttga ctgcccagga 2701 ttggatacca aaatgggggg gataaagggg gatgggggaa gatcagctag atgggtatga 2761 tttgtgacca ctttggcggc accaacgggc gggcgggcat cctacggatc ggctagaact 2821 gtcggacttg agaacgaacc gcttaagata ttaccatact cagtttataa gtagccagta 2881 ctacctagtg taaatagttt ttataaattt aacaaaatgc taaaacaaaa atacactaaa 2941 tataaactaa acgtaaaata tcaagcgttc atcagatata aagaaaaata aacaaaacaa 3001 acaaaaacaa agaaaatcca caaaaaaaaa acaaacaaat ttcaatatat atcttggcaa 3061 aagtagagaa aaacctgata taattttaat tttatgttgc tgtttgctga gatctgtaaa 3121 tattataata ggctttttta aaactgataa ctgataatat ctgaacgatc attttatata 3181 tttacatgca ttatatatct tttgtttaat ttgtattcat actgaaacta ctcaaaccgc 3241 gaaaagtaca agattacttc gaacagctga aagtaagatg gagatgatga tggagttaca 3301 gaaaacagaa aagggaaact agaagagaag caacccctca cctcacctca acacccgcac 3361 taaagccgca gaatgcctaa ctatgaaaaa ccacttgaaa aacagacaaa ttaacgttac 3421 aaattctaaa tatctatata tgcgtgtgtg ccattgttag tcaacaaaca aacataaaac 3481 aaagcaaaaa caaaaaaaca gaaaaaccta ttaagcaaaa aagaatggat acttttcccc 3541 aacaacccat tgtaaataaa atccattttg acagacaaag aaatgcaaag aaaaacacaa 3601 aaaaaaacaa taattgttgc taccaaaact agcctattga aaaacggagt gaaaacctct 3661 aaatgccttt ctttcaaaat tattttgtat atgcaacgag aactatctct tgaaagcaag 3721 caagggaaat tgttgcaaac taatcgctta ccagttagtt accaattctg ggtgtctagc 3781 ctagcagcaa ttttaggtag aattgttcta agatgcagca caaccacaaa aacagcaaaa 3841 acaagaacaa caacaacaca tcaataacac agtaacacac taaccaacct accaaccatg 3901 ttaaccatat ttatttagtt cagaagaaga gttttatttt tcaaaaaatg tatttcacat 3961 tgagaaaata gatcggcagc aacggaaaca atatatataa atcattaatg aagatttcaa 4021 gatcgtaaag agcataattc agtttgatag tcgtcgtcat tgttctcatt gtcgtcatcg 4081 tcataaataa ataacttagt taatataacg tacaagtgat gatccacaca catatatata 4141 tacatatata tctatctatt ttgtcaacat gaaagacttg gcgtgttatt cttcttctac 4201 gatagtttac tactattatt attatcgcta tcattatatc attattatta ttattacgac 4261 gccttttttt tgctgtttgt ttctagttct ttcgtgcgta attaatttac catttacttg 4321 ctaatttaaa gtaattcatt cttattgtta tcttaaaaca ttattgactt gatcaacttt 4381 tggaggggcc aaggaggttt ttggcggggg ggatgggagg atctcgagat cccaagttcc 4441 ccccttcgcc ccctcccgct gccttccaca ctctagtgca aattcgttta atggatcctt 4501 gttttagtgt cgcctttgaa aattctttcg agagaaaaat acattttagc ctatggaaca 4561 ctacttatac tattggttac ttttaaatga gaaacattaa acactattct aggtcaaagt 4621 ctaatttcaa tttgtattcg ccagagttgt caacgttctc ggtgttttat cgaattcatt 4681 gtagatttgt cacttgtaca attgttgata aactgattaa ctgataactg attaactgac 4741 atagagataa tgcaaatgca aatgcaaaca caacagacat gatgtagagc acatattgaa 4801 actaatctta gtggatagcg ttggatagcg agaagagtgt cctcccttaa agatcatcgt 4861 atgtgtgtgg tacttctatt ttttttctta tctagtaatg ctgggaggac aagagttacg 4921 aataagattt aatttataga cgcattaaag tgagaataat ttacaaatct agttattaac 4981 taaatataat gcaagtacat taaaataaaa cattattgaa aaggaa