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LOCUS XM_017137626 1847 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017137626 VERSION XM_017137626.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137626.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1847 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1847 /gene="ben" /note="bendless; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:108054585" CDS 229..684 /gene="ben" /codon_start=1 /product="ubiquitin-conjugating enzyme E2 N" /protein_id="XP_016993115.1" /db_xref="GeneID:108054585" /translation="MSSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPND SPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIR TILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYAVED" misc_feature 238..669 /gene="ben" /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain of ubiquitin-conjugating enzyme E2 N and related proteins; Region: UBCc_UBE2N; cd23813" /db_xref="CDD:467433" polyA_site 1847 /gene="ben" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acacacacaa acattttttg tccaagtgtg cgttcgacat tcataatttt ttgtggttga 61 agctgactgc ccaaaaaaaa ccgaaaatta acacaatttg ccaacgttat ttgcgttcaa 121 attgcaactt aaattcagca ataactttgc gccgcttcgc tttcgacgag aagcatcccc 181 agttttcttc gccccccgac aaaactagtt actttccgca gctgcaagat gtcgagtctg 241 ccacgtcgca tcatcaagga gacgcagcgc ctgatgcagg agccggtgcc cgggatcaat 301 gccattcccg acgagaacaa cgcccgatac tttcacgtga tcgtcaccgg tccgaacgac 361 tcgccctttg agggcggcgt cttcaagctg gagctcttcc tgccggagga ctaccccatg 421 tcggcgccca aggtgcgctt catcacgaag atctaccatc cgaacatcga tcggctgggc 481 cgcatttgcc tggacgtgct gaaggacaag tggagtccgg cgctgcagat ccgcaccatc 541 ttgctctcca ttcaggccct gctcagcgca cccaatcccg atgatccgct ggccaacgac 601 gtggccgagt tgtggaaggt caacgaggcg gaggccattc gcaatgcccg cgagtggacc 661 cagaaatatg ccgtcgaaga ctgagcgcga tcgcggatga ggatgaggac gcccgacagg 721 ttgaggaggc gagtgaggag gcgggtgcgg cagttgtatc ggcgattttc cagaaagtgg 781 gtgcgcgact tggacgggcg ggtggggaaa atgcatactt taaaaacaac cggaaaaacc 841 taaagcatac gaagaagaaa aacataaagc ataaaataag aaagaaagaa agaaaatgat 901 aaaaagaaca actttttttt tcgaaccttc tggggcggga tatacatata atatacatat 961 atttttttca accaatcgat cggggcgatc ggctagaggg gaggagagat agcgaaagca 1021 ttctttatgt aagtcatata caatacatgt atccgaaaac gaaagaaaaa acaaaaaaaa 1081 tatcaaaaag taattggttt taatcgtttc tattgatttg ttcgaggggt ctggtgtcta 1141 tatgcatata gccgtatata tatttctatg tgtaactgaa ataaccaacc cataagcatt 1201 aacccatgta gcatcagata ataaatcaat tggaaaggca attagagggg attttggttt 1261 ctttcaagtg aaaactctgt ttttaatacg atcccatccg ttttcaatgt ttcaccaact 1321 ttcagatgtg atctttgtat tttccttaac taggttagtt caccatttcg attgatactt 1381 gagctttgcc tgggttgtgt cagagtccct ttgataaacg ataaatggtt ttaatcgaaa 1441 acaatttttt tttaaccaaa caaagaagcc tttaagctat tagtaatttt tgaaaaaaat 1501 actgattaaa aatattataa aaaaaatata aaataaaaca atgaatgcat acactatata 1561 tttatacaaa aaaaatatga aaagtagtgg cttgattgcg tggacatttt caagagcagt 1621 tctcaacaaa aattgtgtac agtaattaac tttttcaccc aaatcactaa aggataaacc 1681 gaaaaacaat agcaacggca aagcaaccat aaatcaaaga ataaacaaga attaaaatca 1741 agaaaatcac ttcagttttt ttttttaatt taaataaatt tttctaagaa aaaataaaaa 1801 taaaaacgaa ataaaaatga aaaattaaaa taaaaattat aaaaaaa