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LOCUS XM_017137625 2886 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017137625 VERSION XM_017137625.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137625.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2886 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2886 /gene="Mrgn1" /note="Mahogunin ring finger 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054584" CDS 148..2529 /gene="Mrgn1" /codon_start=1 /product="E3 ubiquitin-protein ligase MGRN1" /protein_id="XP_016993114.2" /db_xref="GeneID:108054584" /translation="MGNFVSRQNAAVEEADPSTNNAYKYPPRMGNFFGTHFIMGGERF DTPQPESYLFGENADLNFLGNRPTAFPYPPPQANEPTKTLKSLVNIRKESVRFVKTLN DKKMVGLIEKPKPKPTPTPTPIKDIDIDRDLDLEKDKSNVTIEDVDGNVLCSMGLGGG DPDLAPPPPPCSYNIEFTFDSDAKCAITIYYFCSEDVSPSGVTLVPREGLTSETYHYE KGINQCFSQPGHVFNPQQMPEDELGYSPGREQYPVAIHCVVEEGSDECRQSHTTICVI DHHPENGSYVLRALKQKIFVDGLCYLLQEIYGIENKAVNKTSLDEEIDDHGSECVICM SETRDTLILPCRHLCLCNSCADSLRYQANNCPICRAPFRALLQIRAVQKGISTHVLHQ NTPTSTGGEPAPVDVPPGYIPVSLIEALNGPPQYVARARTSEHDITDSAATVAASTMT SADIKATSPIKSSSQRRPKIKKNASTCTSTSEVGTITNQSGGNGNGSSTHSVEIESDP KKSSTATCTSPTLGGTSTSPEAKQDKLQIVNERKYPRSTAGSGGDGSAGTDDDEDSEN EKLSPLLSPGSKSKNVSSKSLKQVVACLEADDAEKPAGEGSAEESGLKKGSSLKRTKP RPELSGGGGTPSPAEATAEDSDYYTPEDTQNSILSPLCPSERAKSGDPLGAGSLGNGR SAGSVGGPAPVPLVGFSSAVKKNLHKKSTSVGNMVGSGSVATVVDLKSNNVSSLPDML DSPISGNSASTRSSSDSYSSSSSTKQLLSSNPTATAANIIVDDKTALQNAVNV" misc_feature <943..1257 /gene="Mrgn1" /note="RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]; Region: PEX10; COG5574" /db_xref="CDD:227861" misc_feature 1120..1296 /gene="Mrgn1" /note="RING finger (Really Interesting New Gene) domain and U-box domain superfamily; Region: RING_Ubox; cl17238" /db_xref="CDD:473075" misc_feature order(1135..1137,1144..1146,1180..1182,1186..1188, 1198..1200,1207..1209,1240..1242,1249..1251) /gene="Mrgn1" /note="cross-brace motif; other site" /db_xref="CDD:438111" polyA_site 2886 /gene="Mrgn1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tagcacttgc catcgatggc ctaagagaaa ggaagaaaat aggggaaatc gaaaatagaa 61 taataaacca gagcagagaa aaccaaaacc agaggctcca gaggatcgga tatacgacat 121 agggatacac ctgcatctcc cgaccaaatg ggcaactttg tgagcaggca gaacgcggcg 181 gtggaggagg cggatccgag cacgaacaat gcctacaaat atccacccag aatgggcaac 241 ttctttggga cgcacttcat catgggcggc gagcgcttcg acacgccgca gccggaatcc 301 tatctgtttg gcgagaatgc ggatctcaat ttcctgggca accgacccac cgcctttccg 361 tatcccccgc cgcaggccaa cgaacccacc aagaccctca agagtctggt caacattcgc 421 aaggagtcgg tgcgcttcgt caagacgctg aacgacaaga agatggtggg cctcatcgag 481 aagcccaagc ccaagcccac gcccacgcct acgcccatca aggacatcga catcgatcgg 541 gatttggacc tggagaagga caaatccaat gtgaccatcg aggatgtgga cggcaatgtc 601 ctgtgctcca tgggcctggg tggcggagat ccagacttgg ctccaccacc gccgccctgc 661 tcgtacaaca tcgagttcac cttcgactcg gacgccaagt gcgccattac catctactat 721 ttctgctccg aggacgtcag tcccagcggc gtgacgctgg tgccgcgcga gggcctcacc 781 tcggagacgt accactacga gaagggcatc aatcagtgct tctcgcagcc gggccacgtc 841 ttcaatccgc agcagatgcc cgaggatgag ctgggctaca gcccgggacg cgagcaatat 901 cccgtggcca tccattgtgt ggtggaggag ggcagcgacg agtgccgcca gtcgcacacc 961 accatctgtg tgatcgacca tcatccggag aacggcagct atgtgctgcg cgccctcaag 1021 cagaagatct tcgtggatgg cctgtgctat ctgctgcagg agatctacgg catcgagaac 1081 aaggcggtga acaagacgtc gttggacgag gagatcgacg atcatggcag cgagtgtgtc 1141 atctgcatga gtgagacccg ggacaccctg atcctgccct gccgccatct ctgcctgtgc 1201 aattcgtgtg ccgactcgtt gcgctaccag gccaacaact gtcccatttg cagggctcct 1261 ttccgggcgc tgctgcagat tcgggctgtc cagaagggga ttagcacgca tgtgctgcac 1321 cagaacacgc ccacgtcgac gggcggggag cctgcgcccg tggatgtgcc gcctggctat 1381 attccagtct cgctgatcga ggcgctcaac ggaccgccgc aatatgtggc cagggccagg 1441 accagcgagc acgacatcac cgactccgcc gccacagtgg ccgcctcgac aatgaccagt 1501 gccgacatca aggccacttc gcccatcaag tccagcagcc agcggcggcc gaagatcaag 1561 aagaacgcct cgacctgcac gtccaccagc gaggtgggca ccattaccaa ccagtcgggc 1621 ggcaacggaa acggttcgtc cacacattcc gtggaaatcg aaagcgatcc gaagaagtcc 1681 agcacggcca cctgcacttc gcccacactg ggcggcacat ccacgtcgcc ggaagcgaag 1741 caggacaagc tgcagatcgt caacgaacga aagtatccca gatccacggc cggatccggt 1801 ggcgatggct ctgcgggcac cgacgacgac gaggacagcg agaacgagaa gctgtcgccg 1861 ctcctgtcgc ccggcagcaa gagcaagaac gtgtccagca agtcgctgaa gcaagtggtc 1921 gcttgcctgg aggcagacga tgcggaaaag ccagctggcg aggggtccgc tgaggagtcc 1981 ggcctgaaga agggctcctc gctgaagcgc accaaaccga ggccagaact tagcggcggc 2041 ggcggcacac cttcgcccgc cgaggccaca gccgaggatt cggactacta cacgccggaa 2101 gatactcaga actcgatatt gagtccactc tgtccctcgg agcgagccaa gagcggtgat 2161 ccgctgggcg ccggaagcct cggcaacggc aggagcgccg gatccgtggg cggacctgca 2221 cccgttccgc tcgtgggctt cagcagtgcg gtgaagaaga atctgcacaa gaagtccacc 2281 tcggtgggca acatggtggg ttccggttcg gtggccacag ttgtggattt gaagtccaac 2341 aacgttagct cccttccaga catgttggac agcccgatca gcggcaactc ggcctcgacg 2401 cgcagctcca gcgacagtta ctcctccagc tcgtccacca agcagctgct cagctcaaat 2461 ccgaccgcca cggccgccaa catcatcgtg gacgacaaga cagctctgca gaatgccgtc 2521 aatgtttaaa gccggtctca gttgaatttc cgcgtttcgt tttatcgttt ttagcttgcg 2581 tttactctat ttattcgtag tcacctagat ttagttaaat caatgcagct tccccgcccg 2641 caggaacacg atgttaatga agatgatgat gataaagagc aggtttataa ggatggtcgg 2701 agcaggagct acgacgatga gcaggaggag ggaggccacc aggacacaac acttaaccag 2761 tatacagtat acacacacca cacacttgca tgtgtacgta gtttaaacta gcataatggc 2821 ttgggtatat aacaaataaa ctaaatcaaa taaataatgg cgcctagggc gctgcattcc 2881 acaata