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LOCUS XM_017137623 1830 bp mRNA linear INV 09-DEC-2024 protein 5 (Clic), mRNA. ACCESSION XM_017137623 VERSION XM_017137623.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137623.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1830 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1830 /gene="Clic" /note="chloride intracellular channel protein 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054581" CDS 283..1068 /gene="Clic" /codon_start=1 /product="chloride intracellular channel Clic" /protein_id="XP_016993112.1" /db_xref="GeneID:108054581" /translation="MSAEVEAQQSQETNGSSKFDVPEIELIIKASTIDGRRKGACLFC QEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLAILENEKIE RHIMKNIPGGYNLFVQDKEVATLIENLYVKLKLMLVKKDEAKNNALLSHLRKINDHLS ARNTRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTHLTALWRYMYHMYQLDAF TQSCPADQDIINHYKLQQSLKMKKHEELETPTFTTSIPIDISE" misc_feature 337..621 /gene="Clic" /note="GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated...; Region: GST_N_CLIC; cd03061" /db_xref="CDD:239359" misc_feature order(367..369,403..405,409..411,535..537,574..576) /gene="Clic" /note="GSH binding site [chemical binding]; other site" /db_xref="CDD:239359" misc_feature order(373..378,391..393,400..402,415..420,427..429) /gene="Clic" /note="C-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:239359" misc_feature order(409..411,460..471,580..582,589..594,607..609, 613..621) /gene="Clic" /note="dimer interface of oxidized form [polypeptide binding]; other site" /db_xref="CDD:239359" misc_feature 637..981 /gene="Clic" /note="C-terminal, alpha helical domain of Chloride Intracellular Channels; Region: GST_C_CLIC; cd03198" /db_xref="CDD:198307" misc_feature order(811..816,823..825,835..837,931..936,943..948, 961..963) /gene="Clic" /note="N-terminal domain interface [polypeptide binding]; other site" /db_xref="CDD:198307" polyA_site 1830 /gene="Clic" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggtcctcaat tgtcaatacg ctttggcagc gcgcaaatcg aagaacgaac ggcatatttt 61 ttttgacact gcgaggcgag cttcttcttc tcctccgtct ccgtgttgtg tgtgtgagtg 121 tgtccgagtg tttctctcag tgtctctccg tgtgtgtgtg tgtgtattgg caaagaaaat 181 tagcacaaca aaagcgaaaa ggaaacgaac acgcacgcac tcgtcacgcg gataaaactc 241 ttcgatccga tccgatcaga aagcatatag aaaagattcg caatgtcggc cgaagtggaa 301 gcgcagcaga gccaggagac gaacgggtcc agtaaattcg acgtgcccga gatagaactg 361 atcataaagg cctcgaccat cgatgggcga cggaagggcg cctgcctgtt ctgccaggag 421 tacttcatgg acctgtacct gctggccgag ctgaagacga tcagcctgaa ggtgacgacg 481 gtggacatgc agaagccgcc gcccgacttc cgcaccaact tcgaggccac ccacccgccc 541 atcctcatcg acaacgggct ggccatcctg gagaacgaga agatcgagcg gcacatcatg 601 aagaacatac ccggcggcta caacctcttc gtccaggaca aggaggtggc cacgctgatc 661 gagaacctgt acgtcaagtt gaagctgatg ctggtcaaga aggacgaggc caagaacaac 721 gccctgctct cgcatctgcg caagatcaac gaccacctgt ccgcgcgcaa cacgcgcttc 781 ctcaccggcg acaccatgtg ctgcttcgac tgcgagctga tgccgcgcct ccagcacatc 841 cgtgtggcgg gcaagtactt cgtggacttt gagattccga cgcacttgac ggcgctgtgg 901 cgctacatgt accacatgta ccagctggac gccttcacac agtcgtgccc ggccgaccag 961 gacatcatca accactacaa gctgcaacag agtctcaaaa tgaagaagca cgaggagctg 1021 gagacgccaa cgtttacgac atccattcca attgatattt cggagtaggt ttcctatgga 1081 gcagagcaga gcagatcaga tcagagcgga gccatgcagc cacacgtcaa cttatatagt 1141 ttacacagca accacaatat tttggacttt acaactttac aacagcagca gcagcaactc 1201 tgaggactat acatagctgt atacttaacg gataaaacta cccaagcata tattatatat 1261 ataaatgcat atatatatat actacctact atatataacg agtacataac ataacaagca 1321 taacaacaag tgttctttaa gcagccgcgt tgcctttctt cagctatgct taatttaaaa 1381 actataccat gtagtaaaca ccaccaaccg agcaggcttt gacttacttt ccccgcctgt 1441 ttaatattgg ggcattcgca tttgatatac ggatgtccag gcaaacgcat gaatatttac 1501 ttagctcgct gtcaattaaa atctatagat tgcctaaaga ggccgcttct cggtccttct 1561 ttttatttta tattatattt tgtattctgc aaggagcttt tattttttgt atttaaaatc 1621 tgtatttttt ttgcgcaaaa ttatgatttt ggtttttttt ttgctccccg gcgcaagttg 1681 ccattttgtt tgcttttaat ttttatttaa atatttttat cataacaaga aaaacacaaa 1741 aaaaaaaaag aaacgaaaat tagaagagga aatgaagagt attttttgta tttaagtgaa 1801 aaattacaaa taaaaaacac aaaaagacaa