PREDICTED: Drosophila takahashii pupal cuticle protein G1A

LOCUS       XM_017137618            1144 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108054576), mRNA.
ACCESSION   XM_017137618
VERSION     XM_017137618.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017137618.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1144
                     /gene="LOC108054576"
                     /note="pupal cuticle protein G1A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108054576"
     CDS             51..1064
                     /gene="LOC108054576"
                     /codon_start=1
                     /product="pupal cuticle protein G1A"
                     /protein_id="XP_016993107.2"
                     /db_xref="GeneID:108054576"
                     /translation="MKFFAVLSLALLAVASADVSHLTSNTYLPPHAAAASSSYESYQA
                     APAAETYEAPAAASTYESESYAAPAASFTSESYAAPAETASYANEGAAEETYEQPAAT
                     YVAPVVTKSYAAPAAASYSSYSAPAVVKTYSAPAVSSYSAPAVVKTYTAPVVTKAYTA
                     PAVVKTYSAPAVSSYTQAYTAPAVVKSYSAPAVSSYTAPAVTTYAAKTYTAPAVSSYT
                     APAVVKTYSAPAVSTYTAPVVTKAYTAPVVTKTYTAPVVAKTYTAPAVAKTYTAPAVV
                     KTYTAPAVSTYTAPAVSSYSAPAVVKTYSAPAVSSYSAPAVVSSYSGSSGTVYGSNGG
                     YVY"
     misc_feature    <285..974
                     /gene="LOC108054576"
                     /note="ribonuclease E; Reviewed; Region: rne; PRK10811"
                     /db_xref="CDD:236766"
     polyA_site      1144
                     /gene="LOC108054576"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cttaatggtg gagaaggtac tagtgttctc acaacttcgg tcccagcaac atgaaattct
       61 tcgccgtcct ctcgctcgcc ctcctggctg tggcctcggc cgatgtcagc cacctgacca
      121 gcaacaccta cctgcctccc cacgcggccg ccgcctccag cagctacgag tcctaccagg
      181 ctgccccggc tgccgagacc tacgaagctc ccgccgccgc ctccacctac gaaagcgagt
      241 cctatgccgc cccagccgcc tcctttacca gcgagtccta tgccgccccg gctgagactg
      301 cctcctacgc caacgaggga gccgccgagg agacctacga gcagcccgct gccacctacg
      361 tcgccccagt ggtgaccaag tcgtatgccg cccccgccgc cgcctcctac tcctcctact
      421 ccgcccccgc tgtggtgaag acctactccg ccccagctgt gtcctcttac tccgcccccg
      481 ctgtggtcaa gacctacacc gctcccgtgg tgaccaaggc ctacaccgcc cccgctgttg
      541 tgaagaccta ttccgcccca gctgtgtcca gctacactca ggcttacacc gcacccgccg
      601 tggtcaagag ctactcggcc ccagctgtct ccagctacac tgctcctgcc gtgaccacct
      661 atgccgccaa gacctacacc gcccccgctg tgtctagcta caccgccccc gctgttgtga
      721 agacctactc cgccccagct gtgtccacct acactgctcc tgtggtgacc aaggcttaca
      781 ccgctcctgt ggtgaccaag acctacaccg cccccgtggt ggctaagacc tacactgctc
      841 ccgctgtggc caagacctac actgctcccg ctgtggtgaa gacctacacc gccccggctg
      901 tgtccaccta caccgccccc gctgtgtcct cttactccgc ccccgctgtt gtgaagacct
      961 attccgcccc ggctgtgtcc agctactccg cccctgctgt ggtcagcagc tactccggat
     1021 cctcgggcac cgtctacggc tccaacggtg gatacgtcta ctaaagactg cgtcccgaaa
     1081 cgaaagtgat catgcgacga aacctttttt tttcttacaa taaatcgaat gtaatgtgct
     1141 aaaa