Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017137610 2749 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017137610 VERSION XM_017137610.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017137610.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2749 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2749 /gene="Nup93-1" /note="Nucleoporin 93kD-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108054571" CDS 105..2585 /gene="Nup93-1" /codon_start=1 /product="nuclear pore complex protein Nup93-1" /protein_id="XP_016993099.1" /db_xref="GeneID:108054571" /translation="MDLVELLQQAQRLTNETKMDTEMPGVERTMSQVLQATQELHSRV TQTGTNDLQAHILLGSKGVDLPQLTQKLETLSARQSFEPLDPVTDTDVQGYLKNEREN AILSVIDETNRSIFEAVERQKWRCVYAEWGEEKESLLNALVGPCQQDFPDVQRQLVPT AMADEPTPYSRLNFIQQLYAKQIVAYNESHIQGTQRANLVSTFARLAHDSFDDPLVAE MWSVLEFMAGVTPLSRNIDPIQSRQTAPQFVQQARTYLERRYKTYMNKVIEQNLVAAR RGGIPAVYNLVGSYVGVTFQQPQSLYGLHDVNNGRPLWPLVYYSLRSGDMGAAVRYLK ESGTCPDLLKLMTLQKTAAGNRDTSTAKLEGQLRLEYNNKLHVCTDPYKKAVYVIVLA CDPHDTHAELMRSIDDFLWMQLSILRGQDKRDYNIEQLTYGGLQSLILEKYGENYFNA REKTPLYFQVLALTGQFEAAIEFLARTEPNRPHAVHMAIALNELCMLGAPSSAKQPLL SCEPDDPPPMKRLNLVRLIVMYAKCFEQTDTQQALHYYYLLRHFKSEDGGNAMLNCVS DLLVENCDDQMLQLVFGVVDEANSFRFTGGIFAEFHTMDYDKYALAGMVGDELSRRSN YEAAIKLYFIAGQLDKALRLVCSLLSQVVHQPPRPGSMRERLSAVTRRLDAALAERKT DVEAHVIVTYTVLSQVMEFFDLHHAGESRLALEILANNRLVPANSSEVDECVTNLKRM GPEIIKVLPDILLAAMDIVYQEYVNQRGSSGAGSVYGEDAKSENKEAALRHLRGRAKA LTNMAASVPYRMPATTNQRLVQLEILMH" misc_feature 744..2555 /gene="Nup93-1" /note="Nup93/Nic96; Region: Nic96; pfam04097" /db_xref="CDD:461172" polyA_site 2749 /gene="Nup93-1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagaattggc acgcgctggc cacactaaca cgcgcttgtt tttttttttg ctaactcaac 61 gccggctttt cgctaccaag agattaagag ccaccgctag caagatggac ctggtggagc 121 tgctgcagca ggcccagcgc ctgacgaacg agaccaagat ggacacggag atgccgggcg 181 tggagcggac catgtcgcag gtgctgcagg cgacccagga gctccactcg cgtgtcaccc 241 agacgggcac aaacgatctg caggcccaca tactgctcgg ctccaagggc gtggacctgc 301 cccagctgac ccagaagctg gagacgctca gcgcgcggca atccttcgag ccactcgatc 361 ccgtgacgga caccgatgtg cagggctatc tgaagaacga gcgggagaac gccattctgt 421 cggtgatcga cgagacgaac cggagtatct tcgaggctgt ggagcggcaa aagtggcgct 481 gcgtctacgc cgagtggggc gaggagaagg agtcgctgct gaacgccttg gtcggtccct 541 gccagcagga ctttcccgac gtgcagcgcc agctggtgcc cactgccatg gccgacgagc 601 ccacgcccta ctcccgcctg aatttcatcc agcagctgta cgccaagcag attgtcgcct 661 acaacgaatc gcacatccag ggcacgcagc gcgccaatct ggtgtccaca ttcgcccgcc 721 tggcccacga ctccttcgac gatccgctcg tggccgagat gtggagcgtg ctggagttca 781 tggccggcgt gacgccgctg tcgcgcaaca tcgatcccat ccagagccgc cagacggcgc 841 cgcagttcgt ccagcaggcg cgcacctacc tggagcgccg ctacaagacc tacatgaaca 901 aggtgatcga gcagaatctg gtggccgctc ggcggggcgg cataccggct gtctacaatc 961 tggtgggctc ctacgtgggc gtcaccttcc agcagccgca gtcgctctac ggcctgcacg 1021 acgtcaataa cggccggccg ctgtggccgc tggtctacta cagcctaagg agcggcgaca 1081 tgggcgccgc ggtgaggtac ctcaaggaat cgggcacctg ccccgatctg ctcaagctga 1141 tgacgctgca gaagacggcg gccggcaacc gggacacctc cacggccaag ctggagggcc 1201 aactgcggct ggagtacaac aacaagttgc atgtctgcac ggatccctac aagaaggccg 1261 tctatgtgat tgtgctggcc tgcgatccgc atgatacgca tgccgagctg atgcgcagca 1321 tcgacgactt cctctggatg cagctgtcca ttctgcgcgg ccaggacaaa cgggattaca 1381 acatcgagca gctgacctac ggcggcctgc agtcgttgat cctggagaag tacggcgaga 1441 actacttcaa tgcgcgcgag aagacgccgc tctacttcca ggtgctggcc ctcaccggcc 1501 aattcgaggc ggccattgag tttttggccc gcacggagcc gaatcgcccg cacgccgtcc 1561 acatggccat cgccctgaac gagctgtgca tgctgggcgc tcccagttcg gcgaagcagc 1621 cgctgctcag ctgcgagccc gacgatccgc cgcccatgaa gcggctcaat ctggtgcggc 1681 tgatcgtcat gtacgccaag tgcttcgagc agacggacac ccagcaggcg ctgcactact 1741 actacctgct gcgccacttc aagtccgagg acggcggcaa tgcgatgctc aactgcgtca 1801 gcgatctgct ggtggagaac tgcgacgacc agatgctgca gctggttttc ggggtggtcg 1861 acgaggccaa ctccttccgc ttcacgggtg gcatctttgc cgagttccac accatggact 1921 atgataaata cgctttggcg ggaatggtgg gcgacgagct atccaggcgg agcaactacg 1981 aggcggccat caagctgtac ttcatcgccg gccagctgga caaggcgctg cgcctggtgt 2041 gctcgctgct ctcccaggtg gtccaccagc cgccgcgacc gggcagcatg cgcgagcggc 2101 tgagcgcggt caccaggcga ctggatgcgg cgctggccga gcgcaagact gacgtggagg 2161 cccatgtgat tgtgacctac accgtgctgt cgcaggtcat ggagttcttc gatctccatc 2221 atgcaggcga gtcgcgtctg gccttggaaa tcctggccaa caaccgactg gtgcccgcca 2281 actccagcga ggtggacgag tgcgtgacga acctgaagcg catgggtccc gagatcatca 2341 aggtgctgcc cgacattctg ctggcggcca tggacatcgt gtaccaggag tacgtcaacc 2401 aaaggggctc cagtggagcg ggttcggtgt acggcgagga tgcgaagagc gagaacaagg 2461 aggccgccct caggcatttg cgcggccggg ccaaggcgct gaccaacatg gctgccagcg 2521 ttccctaccg catgcccgcg accaccaatc agcgactcgt ccagctggag atcctgatgc 2581 actaattgtt taagacttaa gagaaactct tcttagatat gtgagctctg attatgttta 2641 taatggcgtg tcgtacaggc acttgtccaa atgaaatata ctttaaagca ctccagtgtt 2701 tggaaaccca cgaaatgcat gtagaataaa gttaatttcc cacaagaaa