PREDICTED: Drosophila takahashii probable

LOCUS       XM_017137600             917 bp    mRNA    linear   INV 09-DEC-2024
            methylthioribulose-1-phosphate dehydratase (LOC108054563), mRNA.
ACCESSION   XM_017137600
VERSION     XM_017137600.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017137600.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..917
                     /gene="LOC108054563"
                     /note="probable methylthioribulose-1-phosphate
                     dehydratase; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 Proteins"
                     /db_xref="GeneID:108054563"
     CDS             99..782
                     /gene="LOC108054563"
                     /codon_start=1
                     /product="probable methylthioribulose-1-phosphate
                     dehydratase"
                     /protein_id="XP_016993089.2"
                     /db_xref="GeneID:108054563"
                     /translation="MALSIFKDLPAEHPRHLIPSLCRQFYHLGWVTGTGGGMSIKHND
                     EIYIAPSGVQKERMQPEDLFVQDITGRDLQLPPEIRGLKKSQCTPLFMLAYQHRQAGA
                     VIHTHSQHAVMATLLWPGKTFRCTHLEMIKGVYDEADKRYLRYDEELVVPIIENTPFE
                     RDLADSMYAAMMEHPGCSAILVRRHGVYVWGQNWEKAKTMSECYDYLFSIAVEMKKAG
                     IDPEKFESS"
     misc_feature    150..746
                     /gene="LOC108054563"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); Region:
                     Aldolase_II; cl00214"
                     /db_xref="CDD:469663"
     misc_feature    order(156..158,168..170,192..194,258..260,264..269,
                     417..419,423..428,441..443,456..458,462..464,474..476,
                     531..533,648..650,681..683,702..704,720..722)
                     /gene="LOC108054563"
                     /note="intersubunit interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238232"
     misc_feature    order(207..209,249..254,351..359,411..413,417..419,
                     651..653)
                     /gene="LOC108054563"
                     /note="active site"
                     /db_xref="CDD:238232"
     misc_feature    order(411..413,417..419,651..653)
                     /gene="LOC108054563"
                     /note="Zn2+ binding site [ion binding]; other site"
                     /db_xref="CDD:238232"
     polyA_site      917
                     /gene="LOC108054563"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttcccgcat tgtttacatt cgtgattcgt cgcctttcag cttacagatt tgcctttatc
       61 atcccttatc agcatcgcag agtcacgttg tcagcgcgat ggccctctca atcttcaaag
      121 acctgccggc ggagcatccc cgccacctga ttccctcgct ctgcaggcag ttctaccacc
      181 tgggctgggt caccggcaca ggaggcggca tgagcatcaa gcacaacgat gagatctaca
      241 tagcaccgtc gggcgtccag aaggagcgca tgcagccgga ggatctgttc gtgcaggaca
      301 taaccggcag ggatctgcag ctgccgccgg agatcagggg cctgaagaag agccagtgca
      361 cgccgctctt catgctggcc taccagcacc gccaggcggg cgccgtcatc cacacccact
      421 cgcagcacgc cgtcatggcc acgctcctct ggccgggcaa gaccttccgc tgcacccatc
      481 tggagatgat caagggcgtc tacgacgagg cggataagcg gtatctgcgc tacgacgagg
      541 agctggtcgt acccatcatc gagaatacac cctttgaacg cgacctggcc gacagcatgt
      601 acgccgccat gatggagcat cccggctgca gtgccatcct cgtccggcgg cacggcgtct
      661 acgtttgggg acagaactgg gagaaggcca agaccatgtc ggaatgctat gactatctct
      721 tctccattgc cgtggaaatg aaaaaggccg gaatcgatcc ggagaagttc gaaagctcct
      781 aaggaaatgg agctgataaa aaaaacccac acgttgttta accctatgta agccttatat
      841 actgcattta ctatcagaga tattctgata tgcaaggcaa tggtactgaa aaaatatatg
      901 cgatttaaac agcttaa